RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 CLEC4GQ6UXB4 293 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 ZNF219Q9P2Y4 722 aaPredicted RBP14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 NIP7Q9Y221 180 aaKnown RBP eCLIP14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 BCORQ6W2J9 1755 aa14.39□□□□□ -0.11
NSMCE1-210ENST00000565626 ANKRD31Q8N7Z5 1873 aa14.38□□□□□ -0.11
NSMCE1-210ENST00000565626 PDE6BP35913 854 aa14.38□□□□□ -0.11
NSMCE1-210ENST00000565626 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
NSMCE1-210ENST00000565626 KIF3CO14782 793 aa14.37□□□□□ -0.11
NSMCE1-210ENST00000565626 ANXA1P04083 346 aa14.37□□□□□ -0.11
NSMCE1-210ENST00000565626 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
NSMCE1-210ENST00000565626 ST5P78524 1137 aa14.37□□□□□ -0.11
NSMCE1-210ENST00000565626 LMOD3Q0VAK6 560 aa14.37□□□□□ -0.11
NSMCE1-210ENST00000565626 KRT24Q2M2I5 525 aa14.37□□□□□ -0.11
NSMCE1-210ENST00000565626 PROSER3Q2NL68 480 aa14.36□□□□□ -0.11
NSMCE1-210ENST00000565626 NECTIN2Q92692 538 aa14.36□□□□□ -0.11
NSMCE1-210ENST00000565626 ZBTB3Q9H5J0 574 aa14.36□□□□□ -0.11
NSMCE1-210ENST00000565626 NMRK2Q9NPI5 230 aa14.36□□□□□ -0.11
NSMCE1-210ENST00000565626 LAS1LQ9Y4W2 734 aaKnown RBP14.36□□□□□ -0.11
NSMCE1-210ENST00000565626 LAMB4A4D0S4 1761 aa14.36□□□□□ -0.11
NSMCE1-210ENST00000565626 COL11A2P13942 1736 aaPredicted RBP14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 NFKBIEO00221 500 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 C21orf2O43822 256 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 SRGNP10124 158 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 PDIA6Q15084 440 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 CCDC184Q52MB2 194 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 LRP10Q7Z4F1 713 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 MAP3K15Q6ZN16 1313 aa14.35□□□□□ -0.11
NSMCE1-210ENST00000565626 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 CHL1O00533 1208 aa14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 RGL2O15211 777 aa14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 GPTP24298 496 aa14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 ZEB1P37275 1124 aaPredicted RBP14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 KIF6Q6ZMV9 814 aa14.34□□□□□ -0.11
NSMCE1-210ENST00000565626 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 APAF1O14727 1248 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 STYK1Q6J9G0 422 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 PRPF40BQ6NWY9 871 aaKnown RBP14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 NUTM1Q86Y26 1132 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 BABAM1Q9NWV8 329 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 UBN2Q6ZU65 1347 aa14.33□□□□□ -0.12
NSMCE1-210ENST00000565626 LMNB1P20700 586 aa14.32□□□□□ -0.12
NSMCE1-210ENST00000565626 MASTLQ96GX5 879 aa14.32□□□□□ -0.12
NSMCE1-210ENST00000565626 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
NSMCE1-210ENST00000565626 ABCC12Q96J65 1359 aa14.32□□□□□ -0.12
NSMCE1-210ENST00000565626 KLRG2A4D1S0 409 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 ERFEQ4G0M1 354 aa14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 SUSD4Q5VX71 490 aa14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 OLFM4Q6UX06 510 aa14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 CNKSR1Q969H4 720 aa14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 SBF1O95248 1867 aa14.31□□□□□ -0.12
NSMCE1-210ENST00000565626 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
NSMCE1-210ENST00000565626 NPR1P16066 1061 aa14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 GIGYF2Q6Y7W6 1299 aaKnown RBP14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 COPS6Q7L5N1 327 aa14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 XAGE3Q8WTP9 111 aa14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 C7orf43Q8WVR3 580 aa14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 RRAGCQ9HB90 399 aa14.29□□□□□ -0.12
NSMCE1-210ENST00000565626 ZNF316A6NFI3 1004 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 KDM2BQ8NHM5 1336 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 MBIPQ9NS73 344 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 CHPF2Q9P2E5 772 aa14.28□□□□□ -0.12
NSMCE1-210ENST00000565626 NUP98P52948 1817 aa14.27□□□□□ -0.12
NSMCE1-210ENST00000565626 TNRC6CQ9HCJ0 1690 aaKnown RBP14.27□□□□□ -0.12
NSMCE1-210ENST00000565626 TOMM70O94826 608 aa14.27□□□□□ -0.13
NSMCE1-210ENST00000565626 NTSR2O95665 410 aa14.27□□□□□ -0.13
NSMCE1-210ENST00000565626 SLC51AQ86UW1 340 aa14.27□□□□□ -0.13
NSMCE1-210ENST00000565626 TAOK3Q9H2K8 898 aa14.27□□□□□ -0.13
NSMCE1-210ENST00000565626 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
NSMCE1-210ENST00000565626 HSPA6P17066 643 aa14.26□□□□□ -0.13
NSMCE1-210ENST00000565626 CRY2Q49AN0 593 aa14.26□□□□□ -0.13
NSMCE1-210ENST00000565626 HDGFL1Q5TGJ6 251 aa14.26□□□□□ -0.13
NSMCE1-210ENST00000565626 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
NSMCE1-210ENST00000565626 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
NSMCE1-210ENST00000565626 CACNA1SQ13698 1873 aa14.25□□□□□ -0.13
NSMCE1-210ENST00000565626 ZC3H4Q9UPT8 1303 aaKnown RBP14.25□□□□□ -0.13
NSMCE1-210ENST00000565626 GLTPD2A6NH11 291 aa14.25□□□□□ -0.13
NSMCE1-210ENST00000565626 SYNE4Q8N205 404 aa14.25□□□□□ -0.13
NSMCE1-210ENST00000565626 FER1L6Q2WGJ9 1857 aa14.25□□□□□ -0.13
NSMCE1-210ENST00000565626 IBTKQ9P2D0 1353 aaPredicted RBP14.24□□□□□ -0.13
NSMCE1-210ENST00000565626 LTBP3Q9NS15 1303 aa14.24□□□□□ -0.13
NSMCE1-210ENST00000565626 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
NSMCE1-210ENST00000565626 CCDC93Q567U6 631 aa14.24□□□□□ -0.13
NSMCE1-210ENST00000565626 UTP14AQ9BVJ6 771 aaKnown RBP14.24□□□□□ -0.13
NSMCE1-210ENST00000565626 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
NSMCE1-210ENST00000565626 CCDC88AQ3V6T2 1871 aa14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 HOXB7P09629 217 aa14.23□□□□□ -0.13
NSMCE1-210ENST00000565626 PARP10Q53GL7 1025 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms