RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
COMMD4-212ENST00000565517 MAP3K15Q6ZN16 1313 aa20.03■□□□□ 0.8
COMMD4-212ENST00000565517 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.8
COMMD4-212ENST00000565517 KIF6Q6ZMV9 814 aa20.03■□□□□ 0.8
COMMD4-212ENST00000565517 WDR63Q8IWG1 891 aa20.03■□□□□ 0.8
COMMD4-212ENST00000565517 DDX21Q9NR30 783 aaKnown RBP eCLIP20.03■□□□□ 0.8
COMMD4-212ENST00000565517 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
COMMD4-212ENST00000565517 TTLL7Q6ZT98 887 aa20.02■□□□□ 0.8
COMMD4-212ENST00000565517 DPEP1P16444 411 aa20.01■□□□□ 0.79
COMMD4-212ENST00000565517 HLFQ16534 295 aa20.01■□□□□ 0.79
COMMD4-212ENST00000565517 HDGFL1Q5TGJ6 251 aa20.01■□□□□ 0.79
COMMD4-212ENST00000565517 CHMP4AQ9BY43 222 aa20.01■□□□□ 0.79
COMMD4-212ENST00000565517 GOLGB1Q14789 3259 aaKnown RBP20.01■□□□□ 0.79
COMMD4-212ENST00000565517 UTRNP46939 3433 aa20■□□□□ 0.79
COMMD4-212ENST00000565517 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
COMMD4-212ENST00000565517 KCNA3P22001 575 aa20■□□□□ 0.79
COMMD4-212ENST00000565517 PROSER3Q2NL68 480 aa20■□□□□ 0.79
COMMD4-212ENST00000565517 NECTIN2Q92692 538 aa20■□□□□ 0.79
COMMD4-212ENST00000565517 DBF4Q9UBU7 674 aaPredicted RBP20■□□□□ 0.79
COMMD4-212ENST00000565517 NIP7Q9Y221 180 aaKnown RBP eCLIP20■□□□□ 0.79
COMMD4-212ENST00000565517 ANKRD31Q8N7Z5 1873 aa20■□□□□ 0.79
COMMD4-212ENST00000565517 PRR5LQ6MZQ0 368 aa19.99■□□□□ 0.79
COMMD4-212ENST00000565517 PDZRN3Q9UPQ7 1066 aa19.99■□□□□ 0.79
COMMD4-212ENST00000565517 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
COMMD4-212ENST00000565517 DLEC1Q9Y238 1755 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 ANXA1P04083 346 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 GIGYF2Q6Y7W6 1299 aaKnown RBP19.98■□□□□ 0.79
COMMD4-212ENST00000565517 CNBD1Q8NA66 436 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 BRIP1Q9BX63 1249 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 PIM2Q9P1W9 311 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 ATP10DQ9P241 1426 aa19.98■□□□□ 0.79
COMMD4-212ENST00000565517 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
COMMD4-212ENST00000565517 TPTE2Q6XPS3 522 aa19.97■□□□□ 0.79
COMMD4-212ENST00000565517 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
COMMD4-212ENST00000565517 NBPF5PQ86XG9 351 aaPredicted RBP19.97■□□□□ 0.79
COMMD4-212ENST00000565517 C8orf58Q8NAV2 365 aa19.97■□□□□ 0.79
COMMD4-212ENST00000565517 ZBTB3Q9H5J0 574 aa19.97■□□□□ 0.79
COMMD4-212ENST00000565517 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
COMMD4-212ENST00000565517 YY1P25490 414 aa19.96■□□□□ 0.79
COMMD4-212ENST00000565517 PDE6BP35913 854 aa19.96■□□□□ 0.79
COMMD4-212ENST00000565517 ST5P78524 1137 aa19.96■□□□□ 0.79
COMMD4-212ENST00000565517 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
COMMD4-212ENST00000565517 TSR2Q969E8 191 aaKnown RBP19.96■□□□□ 0.79
COMMD4-212ENST00000565517 HYPKQ9NX55 129 aa19.96■□□□□ 0.79
COMMD4-212ENST00000565517 H0YIN7 160 aa19.95■□□□□ 0.78
COMMD4-212ENST00000565517 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
COMMD4-212ENST00000565517 NPHP1O15259 732 aa19.95■□□□□ 0.78
COMMD4-212ENST00000565517 CHRNA5P30532 468 aa19.95■□□□□ 0.78
COMMD4-212ENST00000565517 ZNF34Q8IZ26 560 aa19.95■□□□□ 0.78
COMMD4-212ENST00000565517 ANKRD36CQ5JPF3 1778 aa19.95■□□□□ 0.78
COMMD4-212ENST00000565517 NYXQ9GZU5 481 aa19.94■□□□□ 0.78
COMMD4-212ENST00000565517 WWC3Q9ULE0 1092 aa19.94■□□□□ 0.78
COMMD4-212ENST00000565517 BCS1LQ9Y276 419 aa19.94■□□□□ 0.78
COMMD4-212ENST00000565517 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
COMMD4-212ENST00000565517 AIMP1Q12904 312 aaKnown RBP19.93■□□□□ 0.78
COMMD4-212ENST00000565517 DALRD3Q5D0E6 543 aaKnown RBP19.93■□□□□ 0.78
COMMD4-212ENST00000565517 CCDC30Q5VVM6 783 aa19.93■□□□□ 0.78
COMMD4-212ENST00000565517 C2CD5Q86YS7 1000 aa19.93■□□□□ 0.78
COMMD4-212ENST00000565517 TSPYL6Q8N831 410 aa19.93■□□□□ 0.78
COMMD4-212ENST00000565517 IBTKQ9P2D0 1353 aaPredicted RBP19.93■□□□□ 0.78
COMMD4-212ENST00000565517 PARP10Q53GL7 1025 aa19.92■□□□□ 0.78
COMMD4-212ENST00000565517 HSP90AB3PQ58FF7 597 aa19.92■□□□□ 0.78
COMMD4-212ENST00000565517 TWISTNBQ3B726 338 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-212ENST00000565517 ANKRD13DQ6ZTN6 518 aa19.91■□□□□ 0.78
COMMD4-212ENST00000565517 CCDC24Q8N4L8 307 aa19.91■□□□□ 0.78
COMMD4-212ENST00000565517 PLBD2Q8NHP8 589 aa19.91■□□□□ 0.78
COMMD4-212ENST00000565517 UBN2Q6ZU65 1347 aa19.91■□□□□ 0.78
COMMD4-212ENST00000565517 ZNF521Q96K83 1311 aa19.91■□□□□ 0.78
COMMD4-212ENST00000565517 FANCIQ9NVI1 1328 aa19.91■□□□□ 0.78
COMMD4-212ENST00000565517 KLRG2A4D1S0 409 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-212ENST00000565517 GPTP24298 496 aa19.9■□□□□ 0.78
COMMD4-212ENST00000565517 GTF2E1P29083 439 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-212ENST00000565517 GOLGA2Q08379 1002 aa19.9■□□□□ 0.78
COMMD4-212ENST00000565517 TCIRG1Q13488 830 aa19.9■□□□□ 0.78
COMMD4-212ENST00000565517 PPP1R42Q7Z4L9 355 aa19.9■□□□□ 0.78
COMMD4-212ENST00000565517 TTLL6Q8N841 843 aa19.9■□□□□ 0.78
COMMD4-212ENST00000565517 MYH16Q9H6N6 1097 aa19.9■□□□□ 0.78
COMMD4-212ENST00000565517 COL11A2P13942 1736 aaPredicted RBP19.9■□□□□ 0.78
COMMD4-212ENST00000565517 FAM177BA6PVY3 158 aa19.89■□□□□ 0.77
COMMD4-212ENST00000565517 SUSD4Q5VX71 490 aa19.89■□□□□ 0.77
COMMD4-212ENST00000565517 SRGNP10124 158 aa19.88■□□□□ 0.77
COMMD4-212ENST00000565517 STYK1Q6J9G0 422 aa19.88■□□□□ 0.77
COMMD4-212ENST00000565517 SPINK5Q9NQ38 1064 aaPredicted RBP19.88■□□□□ 0.77
COMMD4-212ENST00000565517 ARFGEF2Q9Y6D5 1785 aa19.88■□□□□ 0.77
COMMD4-212ENST00000565517 RIC1Q4ADV7 1423 aa19.87■□□□□ 0.77
COMMD4-212ENST00000565517 RNF123Q5XPI4 1314 aa19.87■□□□□ 0.77
COMMD4-212ENST00000565517 MIER1Q8N108 512 aa19.87■□□□□ 0.77
COMMD4-212ENST00000565517 MASTLQ96GX5 879 aa19.87■□□□□ 0.77
COMMD4-212ENST00000565517 PHAXQ9H814 394 aaKnown RBP19.87■□□□□ 0.77
COMMD4-212ENST00000565517 NTSR2O95665 410 aa19.86■□□□□ 0.77
COMMD4-212ENST00000565517 ARHGAP27Q6ZUM4 889 aa19.86■□□□□ 0.77
COMMD4-212ENST00000565517 CNKSR1Q969H4 720 aa19.86■□□□□ 0.77
COMMD4-212ENST00000565517 ZNF622Q969S3 477 aaKnown RBP eCLIP19.86■□□□□ 0.77
COMMD4-212ENST00000565517 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
COMMD4-212ENST00000565517 VAMP4O75379 141 aa19.85■□□□□ 0.77
COMMD4-212ENST00000565517 EXOSC9Q06265 439 aaKnown RBP19.85■□□□□ 0.77
COMMD4-212ENST00000565517 ERFEQ4G0M1 354 aa19.85■□□□□ 0.77
COMMD4-212ENST00000565517 NLRP10Q86W26 655 aa19.85■□□□□ 0.77
COMMD4-212ENST00000565517 NUTM1Q86Y26 1132 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms