RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NBPF11Q86T75 865 aa8.99□□□□□ -0.97
CHD9-215ENST00000565442 PLPP7Q8NBV4 271 aa8.99□□□□□ -0.97
CHD9-215ENST00000565442 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
CHD9-215ENST00000565442 TRIM28Q13263 835 aaKnown RBP8.98□□□□□ -0.97
CHD9-215ENST00000565442 PRM3Q9NNZ6 103 aa8.98□□□□□ -0.97
CHD9-215ENST00000565442 STARD13Q9Y3M8 1113 aa8.98□□□□□ -0.97
CHD9-215ENST00000565442 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
CHD9-215ENST00000565442 TXLNAP40222 546 aa8.97□□□□□ -0.97
CHD9-215ENST00000565442 TNFRSF25Q93038 417 aa8.97□□□□□ -0.97
CHD9-215ENST00000565442 ALBP02768 609 aa8.96□□□□□ -0.98
CHD9-215ENST00000565442 GRIK4Q16099 956 aa8.96□□□□□ -0.98
CHD9-215ENST00000565442 C8orf86Q6ZUL3 223 aa8.96□□□□□ -0.98
CHD9-215ENST00000565442 MICALL1Q8N3F8 863 aa8.96□□□□□ -0.98
CHD9-215ENST00000565442 NID1P14543 1247 aa8.95□□□□□ -0.98
CHD9-215ENST00000565442 VAC14Q08AM6 782 aa8.95□□□□□ -0.98
CHD9-215ENST00000565442 FLIIQ13045 1269 aa8.94□□□□□ -0.98
CHD9-215ENST00000565442 LRRC69Q6ZNQ3 347 aa8.94□□□□□ -0.98
CHD9-215ENST00000565442 ZDHHC1Q8WTX9 485 aa8.94□□□□□ -0.98
CHD9-215ENST00000565442 SLC30A3Q99726 388 aa8.94□□□□□ -0.98
CHD9-215ENST00000565442 LRP8Q14114 963 aa8.93□□□□□ -0.98
CHD9-215ENST00000565442 PCDHGA11Q9Y5H2 935 aa8.93□□□□□ -0.98
CHD9-215ENST00000565442 C9orf172C9J069 976 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 EML1O00423 815 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 BACH1O14867 736 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 H2AFB1P0C5Y9 115 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 ADH7P40394 386 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 SFSWAPQ12872 951 aaKnown RBP8.92□□□□□ -0.98
CHD9-215ENST00000565442 L3MBTL2Q969R5 705 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 ZMYND15Q9H091 742 aa8.92□□□□□ -0.98
CHD9-215ENST00000565442 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
CHD9-215ENST00000565442 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
CHD9-215ENST00000565442 NEUROD4Q9HD90 331 aa8.91□□□□□ -0.98
CHD9-215ENST00000565442 GPC6Q9Y625 555 aaPredicted RBP8.91□□□□□ -0.98
CHD9-215ENST00000565442 SPEM2Q0P670 501 aa8.9□□□□□ -0.98
CHD9-215ENST00000565442 NEUROD1Q13562 356 aa8.9□□□□□ -0.98
CHD9-215ENST00000565442 ADGRE1Q14246 886 aa8.9□□□□□ -0.98
CHD9-215ENST00000565442 MCM6Q14566 821 aa8.9□□□□□ -0.98
CHD9-215ENST00000565442 MBTPS1Q14703 1052 aa8.9□□□□□ -0.98
CHD9-215ENST00000565442 TEAD4Q15561 434 aa8.9□□□□□ -0.98
CHD9-215ENST00000565442 NOS2P35228 1153 aa8.89□□□□□ -0.99
CHD9-215ENST00000565442 TRAPPC3LQ5T215 181 aa8.89□□□□□ -0.99
CHD9-215ENST00000565442 C20orf204Q6ZNR8 217 aa8.89□□□□□ -0.99
CHD9-215ENST00000565442 RAB44Q7Z6P3 723 aaPredicted RBP8.89□□□□□ -0.99
CHD9-215ENST00000565442 SEMA3FQ13275 785 aa8.88□□□□□ -0.99
CHD9-215ENST00000565442 ZNF358Q9NW07 568 aa8.88□□□□□ -0.99
CHD9-215ENST00000565442 ZNF232Q9UNY5 417 aa8.88□□□□□ -0.99
CHD9-215ENST00000565442 ELNP15502 786 aa8.87□□□□□ -0.99
CHD9-215ENST00000565442 SELPP16109 830 aa8.87□□□□□ -0.99
CHD9-215ENST00000565442 WASHC4Q2M389 1173 aa8.87□□□□□ -0.99
CHD9-215ENST00000565442 TXNRD3Q86VQ6 643 aa8.87□□□□□ -0.99
CHD9-215ENST00000565442 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.87□□□□□ -0.99
CHD9-215ENST00000565442 C7orf43Q8WVR3 580 aa8.87□□□□□ -0.99
CHD9-215ENST00000565442 HYAL3O43820 417 aaPredicted RBP8.86□□□□□ -0.99
CHD9-215ENST00000565442 LILRB5O75023 590 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
CHD9-215ENST00000565442 SOX11P35716 441 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 EPHA4P54764 986 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 EML3Q32P44 896 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 SLC9A9Q8IVB4 645 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 RHPN1Q8TCX5 695 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 CLUAP1Q96AJ1 413 aa8.86□□□□□ -0.99
CHD9-215ENST00000565442 A0A0A0MRY4 1105 aa8.85□□□□□ -0.99
CHD9-215ENST00000565442 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
CHD9-215ENST00000565442 ABL2P42684 1182 aa8.85□□□□□ -0.99
CHD9-215ENST00000565442 GTF2IP78347 998 aa8.85□□□□□ -0.99
CHD9-215ENST00000565442 NRG1Q02297 640 aaPredicted RBP8.85□□□□□ -0.99
CHD9-215ENST00000565442 GDPD2Q9HCC8 539 aa8.85□□□□□ -0.99
CHD9-215ENST00000565442 NOD1Q9Y239 953 aa8.85□□□□□ -0.99
CHD9-215ENST00000565442 PSME1Q06323 249 aa8.84□□□□□ -0.99
CHD9-215ENST00000565442 TBCELQ5QJ74 424 aa8.84□□□□□ -0.99
CHD9-215ENST00000565442 SH3PXD2AQ5TCZ1 1133 aa8.84□□□□□ -0.99
CHD9-215ENST00000565442 LENG1Q96BZ8 264 aaPredicted RBP8.84□□□□□ -0.99
CHD9-215ENST00000565442 BRD7Q9NPI1 651 aa8.84□□□□□ -0.99
CHD9-215ENST00000565442 SERTM1A2A2V5 107 aa8.83□□□□□ -1
CHD9-215ENST00000565442 BTBD11A6QL63 1104 aa8.83□□□□□ -1
CHD9-215ENST00000565442 KCNQ4P56696 695 aa8.83□□□□□ -1
CHD9-215ENST00000565442 RAC1P63000 192 aa8.83□□□□□ -1
CHD9-215ENST00000565442 SHISA2Q6UWI4 295 aa8.83□□□□□ -1
CHD9-215ENST00000565442 KRTAP19-1Q8IUB9 90 aa8.83□□□□□ -1
CHD9-215ENST00000565442 TP53INP1Q96A56 240 aa8.83□□□□□ -1
CHD9-215ENST00000565442 TNS4Q8IZW8 715 aa8.82□□□□□ -1
CHD9-215ENST00000565442 POM121Q96HA1 1249 aa8.82□□□□□ -1
CHD9-215ENST00000565442 CEP63Q96MT8 703 aa8.82□□□□□ -1
CHD9-215ENST00000565442 KRTAP9-9Q9BYP9 154 aa8.82□□□□□ -1
CHD9-215ENST00000565442 KRTAP9-4Q9BYQ2 154 aa8.82□□□□□ -1
CHD9-215ENST00000565442 KCNH4Q9UQ05 1017 aa8.82□□□□□ -1
CHD9-215ENST00000565442 HSH2DQ96JZ2 352 aa8.81□□□□□ -1
CHD9-215ENST00000565442 JPH1Q9HDC5 661 aaPredicted RBP8.81□□□□□ -1
CHD9-215ENST00000565442 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
CHD9-215ENST00000565442 SKIP12755 728 aa8.8□□□□□ -1
CHD9-215ENST00000565442 TYRO3Q06418 890 aa8.8□□□□□ -1
CHD9-215ENST00000565442 C1orf53Q5VUE5 145 aa8.8□□□□□ -1
CHD9-215ENST00000565442 BHMTQ93088 406 aa8.8□□□□□ -1
CHD9-215ENST00000565442 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
CHD9-215ENST00000565442 ANKIB1Q9P2G1 1089 aa8.8□□□□□ -1
CHD9-215ENST00000565442 RAD21O60216 631 aa8.79□□□□□ -1
CHD9-215ENST00000565442 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
CHD9-215ENST00000565442 SSBP4Q9BWG4 385 aaPredicted RBP8.79□□□□□ -1
CHD9-215ENST00000565442 GOLGA2P5Q9HBQ8 144 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms