RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 CHRNA5P30532 468 aa29.17■■■□□ 2.26
CDH11-211ENST00000565210 NCBP3Q53F19 620 aaKnown RBP29.17■■■□□ 2.26
CDH11-211ENST00000565210 TPTE2Q6XPS3 522 aa29.17■■■□□ 2.26
CDH11-211ENST00000565210 NBPF5PQ86XG9 351 aaPredicted RBP29.17■■■□□ 2.26
CDH11-211ENST00000565210 MAP3K15Q6ZN16 1313 aa29.17■■■□□ 2.26
CDH11-211ENST00000565210 PRR5LQ6MZQ0 368 aa29.16■■■□□ 2.26
CDH11-211ENST00000565210 CHMP4AQ9BY43 222 aa29.16■■■□□ 2.26
CDH11-211ENST00000565210 CCDC27Q2M243 656 aa29.15■■■□□ 2.26
CDH11-211ENST00000565210 C2CD5Q86YS7 1000 aa29.15■■■□□ 2.26
CDH11-211ENST00000565210 MBIPQ9NS73 344 aa29.14■■■□□ 2.26
CDH11-211ENST00000565210 N4BP2Q86UW6 1770 aaPredicted RBP29.13■■■□□ 2.25
CDH11-211ENST00000565210 ZNF853P0CG23 659 aa29.13■■■□□ 2.25
CDH11-211ENST00000565210 GTF2E1P29083 439 aaPredicted RBP29.13■■■□□ 2.25
CDH11-211ENST00000565210 HLFQ16534 295 aa29.13■■■□□ 2.25
CDH11-211ENST00000565210 ARHGAP27Q6ZUM4 889 aa29.13■■■□□ 2.25
CDH11-211ENST00000565210 NRXN2Q9P2S2 1712 aa29.13■■■□□ 2.25
CDH11-211ENST00000565210 HDGFL1Q5TGJ6 251 aa29.12■■■□□ 2.25
CDH11-211ENST00000565210 TTLL7Q6ZT98 887 aa29.12■■■□□ 2.25
CDH11-211ENST00000565210 TTLL6Q8N841 843 aa29.12■■■□□ 2.25
CDH11-211ENST00000565210 ZNF784Q8NCA9 323 aaPredicted RBP29.12■■■□□ 2.25
CDH11-211ENST00000565210 DDX21Q9NR30 783 aaKnown RBP eCLIP29.12■■■□□ 2.25
CDH11-211ENST00000565210 NECTIN2Q92692 538 aa29.11■■■□□ 2.25
CDH11-211ENST00000565210 NYXQ9GZU5 481 aa29.11■■■□□ 2.25
CDH11-211ENST00000565210 AFDNP55196 1824 aaKnown RBP29.1■■■□□ 2.25
CDH11-211ENST00000565210 PDIA6Q15084 440 aa29.1■■■□□ 2.25
CDH11-211ENST00000565210 DUSP27Q5VZP5 1158 aa29.1■■■□□ 2.25
CDH11-211ENST00000565210 ZBTB3Q9H5J0 574 aa29.1■■■□□ 2.25
CDH11-211ENST00000565210 BCORQ6W2J9 1755 aa29.1■■■□□ 2.25
CDH11-211ENST00000565210 DBF4Q9UBU7 674 aaPredicted RBP29.09■■■□□ 2.25
CDH11-211ENST00000565210 KIAA1551Q9HCM1 1747 aa29.08■■■□□ 2.25
CDH11-211ENST00000565210 KRT24Q2M2I5 525 aa29.08■■■□□ 2.25
CDH11-211ENST00000565210 GIGYF2Q6Y7W6 1299 aaKnown RBP29.08■■■□□ 2.25
CDH11-211ENST00000565210 ZNF622Q969S3 477 aaKnown RBP eCLIP29.08■■■□□ 2.25
CDH11-211ENST00000565210 HSP90AB3PQ58FF7 597 aa29.07■■■□□ 2.24
CDH11-211ENST00000565210 WWC1Q8IX03 1113 aa29.07■■■□□ 2.24
CDH11-211ENST00000565210 FAM9BQ8IZU0 186 aa29.07■■■□□ 2.24
CDH11-211ENST00000565210 FAM177BA6PVY3 158 aa29.06■■■□□ 2.24
CDH11-211ENST00000565210 COPS6Q7L5N1 327 aa29.06■■■□□ 2.24
CDH11-211ENST00000565210 CCDC24Q8N4L8 307 aa29.06■■■□□ 2.24
CDH11-211ENST00000565210 AIMP1Q12904 312 aaKnown RBP29.05■■■□□ 2.24
CDH11-211ENST00000565210 CNKSR1Q969H4 720 aa29.05■■■□□ 2.24
CDH11-211ENST00000565210 ATP10DQ9P241 1426 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 ANXA1P04083 346 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 PROSER3Q2NL68 480 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 PARP10Q53GL7 1025 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 LRP10Q7Z4F1 713 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 PPP1R42Q7Z4L9 355 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 XAGE3Q8WTP9 111 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 MASTLQ96GX5 879 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 HYPKQ9NX55 129 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 CHPF2Q9P2E5 772 aa29.04■■■□□ 2.24
CDH11-211ENST00000565210 IL16Q14005 1332 aa29.03■■■□□ 2.24
CDH11-211ENST00000565210 STYK1Q6J9G0 422 aa29.03■■■□□ 2.24
CDH11-211ENST00000565210 UTRNP46939 3433 aa29.03■■■□□ 2.24
CDH11-211ENST00000565210 ZNF34Q8IZ26 560 aa29.02■■■□□ 2.24
CDH11-211ENST00000565210 GPTP24298 496 aa29.01■■■□□ 2.23
CDH11-211ENST00000565210 ELL2O00472 640 aaPredicted RBP29■■■□□ 2.23
CDH11-211ENST00000565210 SRGNP10124 158 aa29■■■□□ 2.23
CDH11-211ENST00000565210 WDR63Q8IWG1 891 aa29■■■□□ 2.23
CDH11-211ENST00000565210 BRCA1P38398 1863 aaKnown RBP29■■■□□ 2.23
CDH11-211ENST00000565210 NPR1P16066 1061 aa28.99■■■□□ 2.23
CDH11-211ENST00000565210 IBTKQ9P2D0 1353 aaPredicted RBP28.99■■■□□ 2.23
CDH11-211ENST00000565210 KLRG2A4D1S0 409 aaPredicted RBP28.98■■■□□ 2.23
CDH11-211ENST00000565210 CCDC30Q5VVM6 783 aa28.98■■■□□ 2.23
CDH11-211ENST00000565210 ANKRD13DQ6ZTN6 518 aa28.98■■■□□ 2.23
CDH11-211ENST00000565210 SALL2Q9Y467 1007 aaPredicted RBP28.98■■■□□ 2.23
CDH11-211ENST00000565210 SOGA3Q5TF21 947 aa28.97■■■□□ 2.23
CDH11-211ENST00000565210 PLBD2Q8NHP8 589 aa28.97■■■□□ 2.23
CDH11-211ENST00000565210 ARFGEF1Q9Y6D6 1849 aa28.97■■■□□ 2.23
CDH11-211ENST00000565210 SENP3-EIF4A1A0A087X0R7 540 aa28.96■■■□□ 2.23
CDH11-211ENST00000565210 ALDH1B1P30837 517 aa28.96■■■□□ 2.23
CDH11-211ENST00000565210 TCIRG1Q13488 830 aa28.96■■■□□ 2.23
CDH11-211ENST00000565210 SUSD4Q5VX71 490 aa28.96■■■□□ 2.23
CDH11-211ENST00000565210 UTP14AQ9BVJ6 771 aaKnown RBP28.96■■■□□ 2.23
CDH11-211ENST00000565210 C8orf58Q8NAV2 365 aa28.95■■■□□ 2.22
CDH11-211ENST00000565210 GOLGB1Q14789 3259 aaKnown RBP28.95■■■□□ 2.22
CDH11-211ENST00000565210 RNF123Q5XPI4 1314 aa28.94■■■□□ 2.22
CDH11-211ENST00000565210 UBN2Q6ZU65 1347 aa28.94■■■□□ 2.22
CDH11-211ENST00000565210 NUTM1Q86Y26 1132 aa28.94■■■□□ 2.22
CDH11-211ENST00000565210 TSR2Q969E8 191 aaKnown RBP28.94■■■□□ 2.22
CDH11-211ENST00000565210 GPBP1L1Q9HC44 474 aaPredicted RBP28.94■■■□□ 2.22
CDH11-211ENST00000565210 NUP98P52948 1817 aa28.94■■■□□ 2.22
CDH11-211ENST00000565210 GOLGA2Q08379 1002 aa28.93■■■□□ 2.22
CDH11-211ENST00000565210 ERFEQ4G0M1 354 aa28.93■■■□□ 2.22
CDH11-211ENST00000565210 C9orf131Q5VYM1 1079 aa28.93■■■□□ 2.22
CDH11-211ENST00000565210 ADCY9O60503 1353 aa28.92■■■□□ 2.22
CDH11-211ENST00000565210 C21orf2O43822 256 aa28.92■■■□□ 2.22
CDH11-211ENST00000565210 STK31Q9BXU1 1019 aa28.92■■■□□ 2.22
CDH11-211ENST00000565210 NTSR2O95665 410 aa28.91■■■□□ 2.22
CDH11-211ENST00000565210 PRPF40BQ6NWY9 871 aaKnown RBP28.91■■■□□ 2.22
CDH11-211ENST00000565210 NLRP3Q96P20 1036 aa28.91■■■□□ 2.22
CDH11-211ENST00000565210 ANKRD31Q8N7Z5 1873 aa28.91■■■□□ 2.22
CDH11-211ENST00000565210 DLEC1Q9Y238 1755 aa28.9■■■□□ 2.22
CDH11-211ENST00000565210 DDX58O95786 925 aaKnown RBP28.9■■■□□ 2.22
CDH11-211ENST00000565210 RIC3Q7Z5B4 369 aa28.9■■■□□ 2.22
CDH11-211ENST00000565210 RPGRQ92834 1020 aaKnown RBP28.9■■■□□ 2.22
CDH11-211ENST00000565210 RNF181Q9P0P0 153 aa28.9■■■□□ 2.22
CDH11-211ENST00000565210 ZNF219Q9P2Y4 722 aaPredicted RBP28.9■■■□□ 2.22
CDH11-211ENST00000565210 LMNB1P20700 586 aa28.89■■■□□ 2.22
CDH11-211ENST00000565210 TWISTNBQ3B726 338 aaPredicted RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms