RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 MAP3K15Q6ZN16 1313 aa24.1■■□□□ 1.45
PKD1-229ENST00000564890 RGL2O15211 777 aa24.1■■□□□ 1.45
PKD1-229ENST00000564890 C8orf58Q8NAV2 365 aa24.1■■□□□ 1.45
PKD1-229ENST00000564890 DDX21Q9NR30 783 aaKnown RBP eCLIP24.1■■□□□ 1.45
PKD1-229ENST00000564890 CHPF2Q9P2E5 772 aa24.1■■□□□ 1.45
PKD1-229ENST00000564890 CARMIL3Q8ND23 1372 aa24.1■■□□□ 1.45
PKD1-229ENST00000564890 AFDNP55196 1824 aaKnown RBP24.1■■□□□ 1.45
PKD1-229ENST00000564890 TGFB2P61812 414 aa24.09■■□□□ 1.45
PKD1-229ENST00000564890 HLFQ16534 295 aa24.09■■□□□ 1.45
PKD1-229ENST00000564890 GPR162Q16538 588 aa24.09■■□□□ 1.45
PKD1-229ENST00000564890 PXDNLA1KZ92 1463 aa24.08■■□□□ 1.45
PKD1-229ENST00000564890 NRXN2Q9P2S2 1712 aa24.08■■□□□ 1.45
PKD1-229ENST00000564890 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.45
PKD1-229ENST00000564890 ZBTB3Q9H5J0 574 aa24.08■■□□□ 1.45
PKD1-229ENST00000564890 A0A0G2JLW4 131 aa24.06■■□□□ 1.44
PKD1-229ENST00000564890 TSPYL6Q8N831 410 aa24.06■■□□□ 1.44
PKD1-229ENST00000564890 XAGE3Q8WTP9 111 aa24.06■■□□□ 1.44
PKD1-229ENST00000564890 DBF4Q9UBU7 674 aaPredicted RBP24.06■■□□□ 1.44
PKD1-229ENST00000564890 WWC3Q9ULE0 1092 aa24.06■■□□□ 1.44
PKD1-229ENST00000564890 NIP7Q9Y221 180 aaKnown RBP eCLIP24.06■■□□□ 1.44
PKD1-229ENST00000564890 FANCIQ9NVI1 1328 aa24.06■■□□□ 1.44
PKD1-229ENST00000564890 KIAA1551Q9HCM1 1747 aa24.05■■□□□ 1.44
PKD1-229ENST00000564890 DPEP1P16444 411 aa24.05■■□□□ 1.44
PKD1-229ENST00000564890 AIMP1Q12904 312 aaKnown RBP24.05■■□□□ 1.44
PKD1-229ENST00000564890 COPS6Q7L5N1 327 aa24.05■■□□□ 1.44
PKD1-229ENST00000564890 N4BP2Q86UW6 1770 aaPredicted RBP24.04■■□□□ 1.44
PKD1-229ENST00000564890 YBX3P16989 372 aaKnown RBP eCLIP24.04■■□□□ 1.443e-6■□□□□ 8.2
PKD1-229ENST00000564890 NPHP1O15259 732 aa24.03■■□□□ 1.44
PKD1-229ENST00000564890 PRR5LQ6MZQ0 368 aa24.03■■□□□ 1.44
PKD1-229ENST00000564890 CNBD1Q8NA66 436 aa24.03■■□□□ 1.44
PKD1-229ENST00000564890 SPINK5Q9NQ38 1064 aaPredicted RBP24.03■■□□□ 1.44
PKD1-229ENST00000564890 HYPKQ9NX55 129 aa24.03■■□□□ 1.44
PKD1-229ENST00000564890 ZNF521Q96K83 1311 aa24.03■■□□□ 1.44
PKD1-229ENST00000564890 ATP10DQ9P241 1426 aa24.02■■□□□ 1.44
PKD1-229ENST00000564890 TWISTNBQ3B726 338 aaPredicted RBP24.02■■□□□ 1.44
PKD1-229ENST00000564890 GIGYF2Q6Y7W6 1299 aaKnown RBP24.02■■□□□ 1.44
PKD1-229ENST00000564890 NBPF5PQ86XG9 351 aaPredicted RBP24.02■■□□□ 1.44
PKD1-229ENST00000564890 CCDC24Q8N4L8 307 aa24.02■■□□□ 1.44
PKD1-229ENST00000564890 CHMP4AQ9BY43 222 aa24.02■■□□□ 1.44
PKD1-229ENST00000564890 NUP98P52948 1817 aa24.02■■□□□ 1.44
PKD1-229ENST00000564890 GOLGA2Q08379 1002 aa24.01■■□□□ 1.43
PKD1-229ENST00000564890 CCDC30Q5VVM6 783 aa24.01■■□□□ 1.43
PKD1-229ENST00000564890 MYH16Q9H6N6 1097 aa24.01■■□□□ 1.43
PKD1-229ENST00000564890 FAM177BA6PVY3 158 aa24■■□□□ 1.43
PKD1-229ENST00000564890 CHRNA5P30532 468 aa24■■□□□ 1.43
PKD1-229ENST00000564890 ST5P78524 1137 aa24■■□□□ 1.43
PKD1-229ENST00000564890 KCNA3P22001 575 aa23.99■■□□□ 1.43
PKD1-229ENST00000564890 GPTP24298 496 aa23.99■■□□□ 1.43
PKD1-229ENST00000564890 GRIN3BO60391 1043 aa23.98■■□□□ 1.43
PKD1-229ENST00000564890 EXOSC9Q06265 439 aaKnown RBP23.98■■□□□ 1.43
PKD1-229ENST00000564890 TPTE2Q6XPS3 522 aa23.98■■□□□ 1.43
PKD1-229ENST00000564890 BRIP1Q9BX63 1249 aa23.98■■□□□ 1.43
PKD1-229ENST00000564890 UBN2Q6ZU65 1347 aa23.97■■□□□ 1.43
PKD1-229ENST00000564890 ZNF34Q8IZ26 560 aa23.97■■□□□ 1.43
PKD1-229ENST00000564890 PIM2Q9P1W9 311 aa23.97■■□□□ 1.43
PKD1-229ENST00000564890 PDE6BP35913 854 aa23.96■■□□□ 1.43
PKD1-229ENST00000564890 C2CD5Q86YS7 1000 aa23.96■■□□□ 1.43
PKD1-229ENST00000564890 PLBD2Q8NHP8 589 aa23.96■■□□□ 1.43
PKD1-229ENST00000564890 PHAXQ9H814 394 aaKnown RBP23.96■■□□□ 1.43
PKD1-229ENST00000564890 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
PKD1-229ENST00000564890 ANKRD31Q8N7Z5 1873 aa23.96■■□□□ 1.43
PKD1-229ENST00000564890 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
PKD1-229ENST00000564890 HSP90AB3PQ58FF7 597 aa23.95■■□□□ 1.42
PKD1-229ENST00000564890 ANKRD13DQ6ZTN6 518 aa23.95■■□□□ 1.42
PKD1-229ENST00000564890 STK31Q9BXU1 1019 aa23.95■■□□□ 1.42
PKD1-229ENST00000564890 NYXQ9GZU5 481 aa23.95■■□□□ 1.42
PKD1-229ENST00000564890 BRCA1P38398 1863 aaKnown RBP23.94■■□□□ 1.42
PKD1-229ENST00000564890 H0YIN7 160 aa23.94■■□□□ 1.42
PKD1-229ENST00000564890 GTF2E1P29083 439 aaPredicted RBP23.94■■□□□ 1.42
PKD1-229ENST00000564890 SUSD4Q5VX71 490 aa23.94■■□□□ 1.42
PKD1-229ENST00000564890 VAMP4O75379 141 aa23.93■■□□□ 1.42
PKD1-229ENST00000564890 TCIRG1Q13488 830 aa23.93■■□□□ 1.42
PKD1-229ENST00000564890 PARP10Q53GL7 1025 aa23.93■■□□□ 1.42
PKD1-229ENST00000564890 DALRD3Q5D0E6 543 aaKnown RBP23.93■■□□□ 1.42
PKD1-229ENST00000564890 IBTKQ9P2D0 1353 aaPredicted RBP23.92■■□□□ 1.42
PKD1-229ENST00000564890 E9PSI1 815 aa23.92■■□□□ 1.42
PKD1-229ENST00000564890 NUTM1Q86Y26 1132 aa23.92■■□□□ 1.42
PKD1-229ENST00000564890 PDZRN3Q9UPQ7 1066 aa23.92■■□□□ 1.42
PKD1-229ENST00000564890 GOLGB1Q14789 3259 aaKnown RBP23.92■■□□□ 1.42
PKD1-229ENST00000564890 PPP1R42Q7Z4L9 355 aa23.91■■□□□ 1.42
PKD1-229ENST00000564890 ANKRD36CQ5JPF3 1778 aa23.91■■□□□ 1.42
PKD1-229ENST00000564890 DLEC1Q9Y238 1755 aa23.91■■□□□ 1.42
PKD1-229ENST00000564890 NTSR2O95665 410 aa23.9■■□□□ 1.42
PKD1-229ENST00000564890 ERFEQ4G0M1 354 aa23.9■■□□□ 1.42
PKD1-229ENST00000564890 RIC3Q7Z5B4 369 aa23.9■■□□□ 1.42
PKD1-229ENST00000564890 COL11A2P13942 1736 aaPredicted RBP23.9■■□□□ 1.42
PKD1-229ENST00000564890 ABCC12Q96J65 1359 aa23.9■■□□□ 1.42
PKD1-229ENST00000564890 SLC4A2P04920 1241 aa23.89■■□□□ 1.41
PKD1-229ENST00000564890 SLFN5Q08AF3 891 aa23.89■■□□□ 1.41
PKD1-229ENST00000564890 NLRP10Q86W26 655 aa23.89■■□□□ 1.41
PKD1-229ENST00000564890 ZNF622Q969S3 477 aaKnown RBP eCLIP23.89■■□□□ 1.41
PKD1-229ENST00000564890 UTP14AQ9BVJ6 771 aaKnown RBP23.89■■□□□ 1.41
PKD1-229ENST00000564890 UTRNP46939 3433 aa23.88■■□□□ 1.41
PKD1-229ENST00000564890 DDX58O95786 925 aaKnown RBP23.88■■□□□ 1.41
PKD1-229ENST00000564890 YY1P25490 414 aa23.88■■□□□ 1.41
PKD1-229ENST00000564890 TTLL6Q8N841 843 aa23.88■■□□□ 1.41
PKD1-229ENST00000564890 ARFGEF2Q9Y6D5 1785 aa23.88■■□□□ 1.41
PKD1-229ENST00000564890 CHD4Q14839 1912 aa23.87■■□□□ 1.41
PKD1-229ENST00000564890 SRGNP10124 158 aa23.87■■□□□ 1.41
PKD1-229ENST00000564890 CDCA7LQ96GN5 454 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms