RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 CAPN15O75808 1086 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 DDX58O95786 925 aaKnown RBP9.53□□□□□ -0.88
GINS3-205ENST00000564814 A1BGP04217 495 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 TXNRD1Q16881 649 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 PROSER3Q2NL68 480 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 KSR2Q6VAB6 950 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 DZIP1LQ8IYY4 767 aaKnown RBP9.53□□□□□ -0.88
GINS3-205ENST00000564814 LINC00116Q8NCU8 138 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 PLBD2Q8NHP8 589 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 BCL2L13Q9BXK5 485 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 ZBTB1Q9Y2K1 713 aa9.53□□□□□ -0.88
GINS3-205ENST00000564814 COL15A1P39059 1388 aa9.52□□□□□ -0.88
GINS3-205ENST00000564814 NUP98P52948 1817 aa9.52□□□□□ -0.89
GINS3-205ENST00000564814 SSFA2P28290 1259 aa9.52□□□□□ -0.89
GINS3-205ENST00000564814 TRIM28Q13263 835 aaKnown RBP9.52□□□□□ -0.89
GINS3-205ENST00000564814 G2E3Q7L622 706 aa9.52□□□□□ -0.89
GINS3-205ENST00000564814 CHMP4BQ9H444 224 aaKnown RBP9.52□□□□□ -0.89
GINS3-205ENST00000564814 PHAXQ9H814 394 aaKnown RBP9.52□□□□□ -0.89
GINS3-205ENST00000564814 TUBGCP6Q96RT7 1819 aa9.52□□□□□ -0.89
GINS3-205ENST00000564814 A0A087WZG4 1122 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
GINS3-205ENST00000564814 FKBP5Q13451 457 aaPredicted RBP9.51□□□□□ -0.89
GINS3-205ENST00000564814 CLEC4GQ6UXB4 293 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 COPS6Q7L5N1 327 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 DNAAF4Q8WXU2 420 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 MAP3K15Q6ZN16 1313 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 COL24A1Q17RW2 1714 aa9.51□□□□□ -0.89
GINS3-205ENST00000564814 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 ALDH1L1O75891 902 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 RLBP1P12271 317 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 KCNA4P22459 653 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
GINS3-205ENST00000564814 GIGYF2Q6Y7W6 1299 aaKnown RBP9.5□□□□□ -0.89
GINS3-205ENST00000564814 ANKRD13DQ6ZTN6 518 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 PI4KAP1Q8N8J0 262 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 FLAD1Q8NFF5 587 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
GINS3-205ENST00000564814 PPP1R1BQ9UD71 204 aaPredicted RBP9.5□□□□□ -0.89
GINS3-205ENST00000564814 DDX19BQ9UMR2 479 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 UTYO14607 1347 aa9.5□□□□□ -0.89
GINS3-205ENST00000564814 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
GINS3-205ENST00000564814 BEND3Q5T5X7 828 aa9.49□□□□□ -0.89
GINS3-205ENST00000564814 FTSJ3Q8IY81 847 aaKnown RBP9.49□□□□□ -0.89
GINS3-205ENST00000564814 FRAT1Q92837 279 aaPredicted RBP9.49□□□□□ -0.89
GINS3-205ENST00000564814 SPON1Q9HCB6 807 aa9.49□□□□□ -0.89
GINS3-205ENST00000564814 ANO8Q9HCE9 1232 aaPredicted RBP9.49□□□□□ -0.89
GINS3-205ENST00000564814 RTCBQ9Y3I0 505 aaKnown RBP9.49□□□□□ -0.89
GINS3-205ENST00000564814 AFDNP55196 1824 aaKnown RBP9.48□□□□□ -0.89
GINS3-205ENST00000564814 TCERG1O14776 1098 aaKnown RBP9.48□□□□□ -0.89
GINS3-205ENST00000564814 PLIN1O60240 522 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 CAMTA2O94983 1202 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 ANXA1P04083 346 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 MYL6BP14649 208 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
GINS3-205ENST00000564814 TTLL7Q6ZT98 887 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 DZIP3Q86Y13 1208 aaKnown RBP9.48□□□□□ -0.89
GINS3-205ENST00000564814 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 ISCA1Q9BUE6 129 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 PDGFDQ9GZP0 370 aaPredicted RBP9.48□□□□□ -0.89
GINS3-205ENST00000564814 NARFQ9UHQ1 456 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 CHD4Q14839 1912 aa9.48□□□□□ -0.89
GINS3-205ENST00000564814 LAMB2P55268 1798 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 CASZ1Q86V15 1759 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 ZBTB7BO15156 539 aaPredicted RBP9.47□□□□□ -0.89
GINS3-205ENST00000564814 NEFLP07196 543 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 NEXNQ0ZGT2 675 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 C20orf194Q5TEA3 1177 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 KIF6Q6ZMV9 814 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 TMEM57Q8N5G2 664 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 CCDC191Q8NCU4 936 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 AK7Q96M32 723 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 SRCIN1Q9C0H9 1055 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 HDAC5Q9UQL6 1122 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 ZNF652Q9Y2D9 606 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 MAP3K2Q9Y2U5 619 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 USP42Q9H9J4 1324 aaKnown RBP9.47□□□□□ -0.89
GINS3-205ENST00000564814 RIC1Q4ADV7 1423 aa9.47□□□□□ -0.89
GINS3-205ENST00000564814 NRXN2Q9P2S2 1712 aa9.46□□□□□ -0.89
GINS3-205ENST00000564814 NEURL1BA8MQ27 555 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 GNPATO15228 680 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 ZBTB7AO95365 584 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 IGKV5-2P06315 115 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 GNAI3P08754 354 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 PARP10Q53GL7 1025 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 RIC3Q7Z5B4 369 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.9
GINS3-205ENST00000564814 ZNF34Q8IZ26 560 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 PANK1Q8TE04 598 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 STK32BQ9NY57 414 aa9.46□□□□□ -0.9
GINS3-205ENST00000564814 F6X3S4 739 aa9.45□□□□□ -0.9
GINS3-205ENST00000564814 SLC15A2Q16348 729 aa9.45□□□□□ -0.9
GINS3-205ENST00000564814 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
GINS3-205ENST00000564814 ARHGEF1Q92888 912 aaKnown RBP9.45□□□□□ -0.9
GINS3-205ENST00000564814 CLUAP1Q96AJ1 413 aa9.45□□□□□ -0.9
GINS3-205ENST00000564814 TNNQ9UQP3 1299 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms