RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 ATP4AP20648 1035 aa8.26□□□□□ -1.09
CDH1-207ENST00000564745 BRD2P25440 801 aaKnown RBP8.26□□□□□ -1.09
CDH1-207ENST00000564745 AAMPQ13685 434 aa8.26□□□□□ -1.09
CDH1-207ENST00000564745 SCARF1Q14162 830 aa8.26□□□□□ -1.09
CDH1-207ENST00000564745 HSH2DQ96JZ2 352 aa8.26□□□□□ -1.09
CDH1-207ENST00000564745 DACH1Q9UI36 760 aa8.26□□□□□ -1.09
CDH1-207ENST00000564745 AXIN1O15169 862 aa8.25□□□□□ -1.09
CDH1-207ENST00000564745 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
CDH1-207ENST00000564745 RHPN1Q8TCX5 695 aa8.25□□□□□ -1.09
CDH1-207ENST00000564745 ASB16Q96NS5 453 aa8.25□□□□□ -1.09
CDH1-207ENST00000564745 DNMT3LQ9UJW3 386 aa8.25□□□□□ -1.09
CDH1-207ENST00000564745 TAGLNQ01995 201 aaKnown RBP8.24□□□□□ -1.09
CDH1-207ENST00000564745 CTC1Q2NKJ3 1217 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 NBPF1Q3BBV0 1214 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 TMC7Q7Z402 723 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 TREML1Q86YW5 311 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 TIMMDC1Q9NPL8 285 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 BRPF3Q9ULD4 1205 aa8.24□□□□□ -1.09
CDH1-207ENST00000564745 UNCXA6NJT0 531 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 MSX1P28360 303 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 ZAP70P43403 619 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 SUSD3Q96L08 255 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 POLIQ9UNA4 740 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
CDH1-207ENST00000564745 NDUFB5O43674 189 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 DNM1Q05193 864 aaKnown RBP8.22□□□□□ -1.09
CDH1-207ENST00000564745 ALKBH2Q6NS38 261 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 BICDL1Q6ZP65 573 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 RGL4Q8IZJ4 473 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 EDEM1Q92611 657 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 ZIC5Q96T25 663 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 BCL2L13Q9BXK5 485 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 RBCK1Q9BYM8 510 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 GPAMQ9HCL2 828 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 AAASQ9NRG9 546 aa8.22□□□□□ -1.09
CDH1-207ENST00000564745 IGHA2P01877 340 aa8.21□□□□□ -1.1
CDH1-207ENST00000564745 TATP17735 454 aaPredicted RBP8.21□□□□□ -1.1
CDH1-207ENST00000564745 ERCC3P19447 782 aa8.21□□□□□ -1.1
CDH1-207ENST00000564745 ARSJQ5FYB0 599 aaPredicted RBP8.21□□□□□ -1.1
CDH1-207ENST00000564745 WDR44Q5JSH3 913 aa8.21□□□□□ -1.1
CDH1-207ENST00000564745 ZSCAN29Q8IWY8 852 aaPredicted RBP8.21□□□□□ -1.1
CDH1-207ENST00000564745 GPR152Q8TDT2 470 aa8.21□□□□□ -1.1
CDH1-207ENST00000564745 ATP13A2Q9NQ11 1180 aa8.21□□□□□ -1.1
CDH1-207ENST00000564745 DMGDHQ9UI17 866 aaKnown RBP8.21□□□□□ -1.1
CDH1-207ENST00000564745 USP20Q9Y2K6 914 aa8.21□□□□□ -1.1
CDH1-207ENST00000564745 A0A1B0GTH6 734 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 RBM47A0AV96 593 aaKnown RBP8.2□□□□□ -1.1
CDH1-207ENST00000564745 TGFBR3LH3BV60 316 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 OPLAHO14841 1288 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 GPR182O15218 404 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 MICAL2O94851 1124 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 LRRC69Q6ZNQ3 347 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 TMC1Q8TDI8 760 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 GIPC2Q8TF65 315 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 RUBCNLQ9H714 662 aa8.2□□□□□ -1.1
CDH1-207ENST00000564745 SENP3-EIF4A1A0A087X0R7 540 aa8.19□□□□□ -1.1
CDH1-207ENST00000564745 A6NHS1 94 aa8.19□□□□□ -1.1
CDH1-207ENST00000564745 PDGFAP04085 211 aa8.19□□□□□ -1.1
CDH1-207ENST00000564745 ZNF16P17020 682 aaPredicted RBP8.19□□□□□ -1.1
CDH1-207ENST00000564745 FBXO33Q7Z6M2 555 aa8.19□□□□□ -1.1
CDH1-207ENST00000564745 A0A1W2PNR3 127 aa8.18□□□□□ -1.1
CDH1-207ENST00000564745 P4HBP07237 508 aaKnown RBP8.18□□□□□ -1.1
CDH1-207ENST00000564745 MZF1P28698 734 aaPredicted RBP8.18□□□□□ -1.1
CDH1-207ENST00000564745 IDH3AP50213 366 aa8.18□□□□□ -1.1
CDH1-207ENST00000564745 GJD3Q8N144 294 aa8.18□□□□□ -1.1
CDH1-207ENST00000564745 NUDT16Q96DE0 195 aaKnown RBP8.18□□□□□ -1.1
CDH1-207ENST00000564745 FAM129BQ96TA1 746 aa8.18□□□□□ -1.1
CDH1-207ENST00000564745 GAS2L1Q99501 681 aaPredicted RBP8.18□□□□□ -1.1
CDH1-207ENST00000564745 GGNBP2Q9H3C7 697 aa8.18□□□□□ -1.1
CDH1-207ENST00000564745 TREHO43280 583 aa8.17□□□□□ -1.1
CDH1-207ENST00000564745 MAN1A2O60476 641 aa8.17□□□□□ -1.1
CDH1-207ENST00000564745 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
CDH1-207ENST00000564745 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
CDH1-207ENST00000564745 THBS1P07996 1170 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 DSC3Q14574 896 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
CDH1-207ENST00000564745 BTLAQ7Z6A9 289 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 SETDB2Q96T68 719 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 NIF3L1Q9GZT8 377 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 DYRK1BQ9Y463 629 aa8.16□□□□□ -1.1
CDH1-207ENST00000564745 F11P03951 625 aa8.15□□□□□ -1.1
CDH1-207ENST00000564745 INPP5BP32019 993 aa8.15□□□□□ -1.1
CDH1-207ENST00000564745 FMR1Q06787 632 aaKnown RBP eCLIP8.15□□□□□ -1.1
CDH1-207ENST00000564745 C8orf34Q49A92 452 aa8.15□□□□□ -1.1
CDH1-207ENST00000564745 IER5Q5VY09 327 aa8.15□□□□□ -1.1
CDH1-207ENST00000564745 ZNF787Q6DD87 383 aa8.15□□□□□ -1.1
CDH1-207ENST00000564745 ZNF775Q96BV0 537 aaPredicted RBP8.15□□□□□ -1.1
CDH1-207ENST00000564745 NEUROD4Q9HD90 331 aa8.15□□□□□ -1.1
CDH1-207ENST00000564745 KIAA1522Q9P206 1035 aaPredicted RBP8.15□□□□□ -1.1
CDH1-207ENST00000564745 GPC6Q9Y625 555 aaPredicted RBP8.15□□□□□ -1.1
CDH1-207ENST00000564745 MAPK8P45983 427 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 PTSQ03393 145 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 TYRO3Q06418 890 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 EHHADHQ08426 723 aa8.14□□□□□ -1.11
CDH1-207ENST00000564745 TRIP4Q15650 581 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms