RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
GTF3C1-204ENST00000564664 SRGNP10124 158 aa16.06■□□□□ 0.16
GTF3C1-204ENST00000564664 APLP1P51693 650 aa16.06■□□□□ 0.16
GTF3C1-204ENST00000564664 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
GTF3C1-204ENST00000564664 KLRG2A4D1S0 409 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-204ENST00000564664 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
GTF3C1-204ENST00000564664 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
GTF3C1-204ENST00000564664 FSTL1Q12841 308 aa16.05■□□□□ 0.16
GTF3C1-204ENST00000564664 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
GTF3C1-204ENST00000564664 GLTPD2A6NH11 291 aa16.04■□□□□ 0.16
GTF3C1-204ENST00000564664 DDX10Q13206 875 aaKnown RBP16.04■□□□□ 0.16
GTF3C1-204ENST00000564664 NIP7Q9Y221 180 aaKnown RBP eCLIP16.04■□□□□ 0.16
GTF3C1-204ENST00000564664 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 MYBBP1AQ9BQG0 1328 aaKnown RBP16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 LTBP3Q9NS15 1303 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 NFKBIEO00221 500 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 C21orf2O43822 256 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 RIPK4P57078 832 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 RASSF7Q02833 373 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 DPY19L2Q6NUT2 758 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 RRAGCQ9HB90 399 aa16.03■□□□□ 0.16
GTF3C1-204ENST00000564664 NPR1P16066 1061 aa16.02■□□□□ 0.16
GTF3C1-204ENST00000564664 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
GTF3C1-204ENST00000564664 NYXQ9GZU5 481 aa16.02■□□□□ 0.16
GTF3C1-204ENST00000564664 DLG5Q8TDM6 1919 aa16.02■□□□□ 0.15
GTF3C1-204ENST00000564664 ANKRD31Q8N7Z5 1873 aa16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 GTF2E1P29083 439 aaPredicted RBP16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 PRPF40BQ6NWY9 871 aaKnown RBP16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 KIF6Q6ZMV9 814 aa16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 THUMPD2Q9BTF0 503 aaKnown RBP16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 TSPYL4Q9UJ04 414 aa16.01■□□□□ 0.15
GTF3C1-204ENST00000564664 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
GTF3C1-204ENST00000564664 ALDH1B1P30837 517 aa16■□□□□ 0.15
GTF3C1-204ENST00000564664 PRELPP51888 382 aa16■□□□□ 0.15
GTF3C1-204ENST00000564664 HLFQ16534 295 aa16■□□□□ 0.15
GTF3C1-204ENST00000564664 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
GTF3C1-204ENST00000564664 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
GTF3C1-204ENST00000564664 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
GTF3C1-204ENST00000564664 SMC1BQ8NDV3 1235 aa15.99■□□□□ 0.15
GTF3C1-204ENST00000564664 C7orf43Q8WVR3 580 aa15.99■□□□□ 0.15
GTF3C1-204ENST00000564664 KDM3BQ7LBC6 1761 aa15.99■□□□□ 0.15
GTF3C1-204ENST00000564664 RTKN2Q8IZC4 609 aa15.98■□□□□ 0.15
GTF3C1-204ENST00000564664 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
GTF3C1-204ENST00000564664 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
GTF3C1-204ENST00000564664 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
GTF3C1-204ENST00000564664 RUNDC1Q96C34 613 aa15.97■□□□□ 0.15
GTF3C1-204ENST00000564664 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
GTF3C1-204ENST00000564664 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
GTF3C1-204ENST00000564664 TNRC6CQ9HCJ0 1690 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 MYL6BP14649 208 aa15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 TTLL7Q6ZT98 887 aa15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 DNAJC5GQ8N7S2 189 aa15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
GTF3C1-204ENST00000564664 CCDC88AQ3V6T2 1871 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 CHL1O00533 1208 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 PPP1R42Q7Z4L9 355 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 SLX4Q8IY92 1834 aa15.95■□□□□ 0.14
GTF3C1-204ENST00000564664 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
GTF3C1-204ENST00000564664 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
GTF3C1-204ENST00000564664 EIF2S2P20042 333 aaKnown RBP15.94■□□□□ 0.14
GTF3C1-204ENST00000564664 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
GTF3C1-204ENST00000564664 FKBP4Q02790 459 aaKnown RBP eCLIP15.94■□□□□ 0.14
GTF3C1-204ENST00000564664 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
GTF3C1-204ENST00000564664 PDIA6Q15084 440 aa15.93■□□□□ 0.14
GTF3C1-204ENST00000564664 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
GTF3C1-204ENST00000564664 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
GTF3C1-204ENST00000564664 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
GTF3C1-204ENST00000564664 ADAMTS8Q9UP79 889 aa15.93■□□□□ 0.14
GTF3C1-204ENST00000564664 ARFGEF2Q9Y6D5 1785 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 NUP98P52948 1817 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 POTECB2RU33 542 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 SUSD4Q5VX71 490 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 LRP10Q7Z4F1 713 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
GTF3C1-204ENST00000564664 HOXB7P09629 217 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 RPGRQ92834 1020 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 RBM17Q96I25 401 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 PSMD1Q99460 953 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 DDX21Q9NR30 783 aaKnown RBP eCLIP15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
GTF3C1-204ENST00000564664 IQCA1LA6NCM1 817 aa15.9■□□□□ 0.14
GTF3C1-204ENST00000564664 NTSR2O95665 410 aa15.9■□□□□ 0.14
GTF3C1-204ENST00000564664 GPTP24298 496 aa15.9■□□□□ 0.14
GTF3C1-204ENST00000564664 NLRP3Q96P20 1036 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms