RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 GOLGA6L3A6NEY3 463 aa20.18■□□□□ 0.82
CCNF-204ENST00000564333 CABP4P57796 275 aa20.18■□□□□ 0.82
CCNF-204ENST00000564333 XAGE3Q8WTP9 111 aa20.18■□□□□ 0.82
CCNF-204ENST00000564333 SUCLG2Q96I99 432 aa20.18■□□□□ 0.82
CCNF-204ENST00000564333 USP42Q9H9J4 1324 aaKnown RBP20.18■□□□□ 0.82
CCNF-204ENST00000564333 MCCP23508 829 aa20.17■□□□□ 0.82
CCNF-204ENST00000564333 TNPO1Q92973 898 aaKnown RBP20.17■□□□□ 0.82
CCNF-204ENST00000564333 PCDH11XQ9BZA7 1347 aa20.17■□□□□ 0.82
CCNF-204ENST00000564333 PCDH11YQ9BZA8 1340 aa20.17■□□□□ 0.82
CCNF-204ENST00000564333 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
CCNF-204ENST00000564333 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
CCNF-204ENST00000564333 SLAIN2Q9P270 581 aa20.17■□□□□ 0.82
CCNF-204ENST00000564333 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
CCNF-204ENST00000564333 ERC1Q8IUD2 1116 aa20.16■□□□□ 0.82
CCNF-204ENST00000564333 ANO2Q9NQ90 1003 aa20.16■□□□□ 0.82
CCNF-204ENST00000564333 TTC41PQ6P2S7 1318 aa20.16■□□□□ 0.82
CCNF-204ENST00000564333 COPS6Q7L5N1 327 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 BICC1Q9H694 974 aaKnown RBP20.15■□□□□ 0.82
CCNF-204ENST00000564333 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 NEURL1BA8MQ27 555 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 MAP4K4O95819 1239 aaPredicted RBP20.15■□□□□ 0.82
CCNF-204ENST00000564333 LRP10Q7Z4F1 713 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 CNTROBQ8N137 903 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
CCNF-204ENST00000564333 KAZALD1Q96I82 304 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
CCNF-204ENST00000564333 PA2G4Q9UQ80 394 aaKnown RBP20.15■□□□□ 0.82
CCNF-204ENST00000564333 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
CCNF-204ENST00000564333 MYD88Q99836 296 aa20.14■□□□□ 0.81
CCNF-204ENST00000564333 NUP188Q5SRE5 1749 aa20.14■□□□□ 0.81
CCNF-204ENST00000564333 ANAPC15P60006 121 aa20.13■□□□□ 0.81
CCNF-204ENST00000564333 ZCRB1Q8TBF4 217 aaKnown RBP20.13■□□□□ 0.81
CCNF-204ENST00000564333 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
CCNF-204ENST00000564333 EPB41L2O43491 1005 aaKnown RBP20.12■□□□□ 0.81
CCNF-204ENST00000564333 TRAK2O60296 914 aa20.12■□□□□ 0.81
CCNF-204ENST00000564333 GLRX3O76003 335 aaKnown RBP20.12■□□□□ 0.81
CCNF-204ENST00000564333 GCKRQ14397 625 aa20.12■□□□□ 0.81
CCNF-204ENST00000564333 TOGARAM1Q9Y4F4 1720 aa20.12■□□□□ 0.81
CCNF-204ENST00000564333 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
CCNF-204ENST00000564333 GPATCH3Q96I76 525 aa20.12■□□□□ 0.81
CCNF-204ENST00000564333 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
CCNF-204ENST00000564333 ANKRD13DQ6ZTN6 518 aa20.11■□□□□ 0.81
CCNF-204ENST00000564333 IL25Q9H293 177 aa20.11■□□□□ 0.81
CCNF-204ENST00000564333 IFIT2P09913 472 aaKnown RBP20.1■□□□□ 0.81
CCNF-204ENST00000564333 SSFA2P28290 1259 aa20.1■□□□□ 0.81
CCNF-204ENST00000564333 SKOR2Q2VWA4 1001 aaPredicted RBP20.1■□□□□ 0.81
CCNF-204ENST00000564333 ANO8Q9HCE9 1232 aaPredicted RBP20.1■□□□□ 0.81
CCNF-204ENST00000564333 MRE11P49959 708 aa20.1■□□□□ 0.81
CCNF-204ENST00000564333 IL17RAQ96F46 866 aa20.1■□□□□ 0.81
CCNF-204ENST00000564333 CARD10Q9BWT7 1032 aa20.1■□□□□ 0.81
CCNF-204ENST00000564333 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
CCNF-204ENST00000564333 ERBB4Q15303 1308 aa20.09■□□□□ 0.81
CCNF-204ENST00000564333 IL2RBP14784 551 aa20.09■□□□□ 0.81
CCNF-204ENST00000564333 NEK4P51957 841 aa20.09■□□□□ 0.81
CCNF-204ENST00000564333 AACSQ86V21 672 aa20.09■□□□□ 0.81
CCNF-204ENST00000564333 RAD50Q92878 1312 aa20.08■□□□□ 0.81
CCNF-204ENST00000564333 SGSM2O43147 1006 aa20.08■□□□□ 0.81
CCNF-204ENST00000564333 G3BP1Q13283 466 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCNF-204ENST00000564333 TJP1Q07157 1748 aa20.08■□□□□ 0.81
CCNF-204ENST00000564333 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.8
CCNF-204ENST00000564333 MCM2P49736 904 aa20.08■□□□□ 0.8
CCNF-204ENST00000564333 CWC22Q9HCG8 908 aaKnown RBP20.08■□□□□ 0.8
CCNF-204ENST00000564333 SASH1O94885 1247 aa20.07■□□□□ 0.8
CCNF-204ENST00000564333 COL15A1P39059 1388 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 NUCB2P80303 420 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
CCNF-204ENST00000564333 STRN4Q9NRL3 753 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 TNS2Q63HR2 1409 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 HSPA4P34932 840 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 EPHA10Q5JZY3 1008 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 PLBD2Q8NHP8 589 aa20.06■□□□□ 0.8
CCNF-204ENST00000564333 CLEC17AQ6ZS10 378 aa20.05■□□□□ 0.8
CCNF-204ENST00000564333 SIL1Q9H173 461 aa20.05■□□□□ 0.8
CCNF-204ENST00000564333 DIAPH3Q9NSV4 1193 aa20.05■□□□□ 0.8
CCNF-204ENST00000564333 XRCC6P12956 609 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCNF-204ENST00000564333 ZGPATQ8N5A5 531 aaKnown RBP20.04■□□□□ 0.8
CCNF-204ENST00000564333 GZF1Q9H116 711 aaPredicted RBP20.04■□□□□ 0.8
CCNF-204ENST00000564333 LTBP4Q8N2S1 1624 aa20.04■□□□□ 0.8
CCNF-204ENST00000564333 CYP2E1P05181 493 aaPredicted RBP20.04■□□□□ 0.8
CCNF-204ENST00000564333 CWC27Q6UX04 472 aaKnown RBP20.04■□□□□ 0.8
CCNF-204ENST00000564333 LSG1Q9H089 658 aaKnown RBP20.04■□□□□ 0.8
CCNF-204ENST00000564333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
CCNF-204ENST00000564333 UBE3BQ7Z3V4 1068 aa20.03■□□□□ 0.8
CCNF-204ENST00000564333 KLHDC4Q8TBB5 520 aa20.03■□□□□ 0.8
CCNF-204ENST00000564333 EAF2Q96CJ1 260 aaPredicted RBP20.03■□□□□ 0.8
CCNF-204ENST00000564333 TMX3Q96JJ7 454 aa20.03■□□□□ 0.8
CCNF-204ENST00000564333 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
CCNF-204ENST00000564333 EVA1CP58658 441 aa20.02■□□□□ 0.8
CCNF-204ENST00000564333 NBPF14Q5TI25 921 aa20.02■□□□□ 0.8
CCNF-204ENST00000564333 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
CCNF-204ENST00000564333 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
CCNF-204ENST00000564333 DDX54Q8TDD1 881 aaKnown RBP20.02■□□□□ 0.8
CCNF-204ENST00000564333 RUFY2Q8WXA3 655 aa20.02■□□□□ 0.8
CCNF-204ENST00000564333 EVI5LQ96CN4 794 aa20.02■□□□□ 0.8
CCNF-204ENST00000564333 ATP5J2-PTCD1G3V325 749 aa20.02■□□□□ 0.79
CCNF-204ENST00000564333 GOLGA6L22H0YM25 854 aa20.02■□□□□ 0.79
CCNF-204ENST00000564333 PTCD1O75127 700 aaKnown RBP20.02■□□□□ 0.79
CCNF-204ENST00000564333 BAG4O95429 457 aaKnown RBP20.02■□□□□ 0.79
CCNF-204ENST00000564333 RABL6Q3YEC7 729 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms