RNA–Protein interactions for RNA: ENST00000564257.1

NEIL1-203, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-203ENST00000564257 C9orf131Q5VYM1 1079 aa28.4■■■□□ 2.14
NEIL1-203ENST00000564257 RUNDC1Q96C34 613 aa28.4■■■□□ 2.14
NEIL1-203ENST00000564257 PDZRN3Q9UPQ7 1066 aa28.4■■■□□ 2.14
NEIL1-203ENST00000564257 SENP3-EIF4A1A0A087X0R7 540 aa28.39■■■□□ 2.14
NEIL1-203ENST00000564257 NBPF5PQ86XG9 351 aaPredicted RBP28.39■■■□□ 2.14
NEIL1-203ENST00000564257 ZNF622Q969S3 477 aaKnown RBP eCLIP28.39■■■□□ 2.14
NEIL1-203ENST00000564257 SBF1O95248 1867 aa28.38■■■□□ 2.13
NEIL1-203ENST00000564257 ADAMTS8Q9UP79 889 aa28.38■■■□□ 2.13
NEIL1-203ENST00000564257 NIP7Q9Y221 180 aaKnown RBP eCLIP28.38■■■□□ 2.13
NEIL1-203ENST00000564257 CACNA1SQ13698 1873 aa28.38■■■□□ 2.13
NEIL1-203ENST00000564257 MYL6BP14649 208 aa28.37■■■□□ 2.13
NEIL1-203ENST00000564257 RNF181Q9P0P0 153 aa28.37■■■□□ 2.13
NEIL1-203ENST00000564257 RGL2O15211 777 aa28.36■■■□□ 2.13
NEIL1-203ENST00000564257 NUP98P52948 1817 aa28.35■■■□□ 2.13
NEIL1-203ENST00000564257 KIF6Q6ZMV9 814 aa28.35■■■□□ 2.13
NEIL1-203ENST00000564257 BABAM1Q9NWV8 329 aa28.35■■■□□ 2.13
NEIL1-203ENST00000564257 RASSF7Q02833 373 aa28.34■■■□□ 2.13
NEIL1-203ENST00000564257 HLFQ16534 295 aa28.34■■■□□ 2.13
NEIL1-203ENST00000564257 FAM177BA6PVY3 158 aa28.33■■■□□ 2.13
NEIL1-203ENST00000564257 TPTE2Q6XPS3 522 aa28.32■■■□□ 2.12
NEIL1-203ENST00000564257 LAS1LQ9Y4W2 734 aaKnown RBP28.32■■■□□ 2.12
NEIL1-203ENST00000564257 ERBB4Q15303 1308 aa28.32■■■□□ 2.12
NEIL1-203ENST00000564257 EIF2S2P20042 333 aaKnown RBP28.31■■■□□ 2.12
NEIL1-203ENST00000564257 ZNF219Q9P2Y4 722 aaPredicted RBP28.31■■■□□ 2.12
NEIL1-203ENST00000564257 MAP3K15Q6ZN16 1313 aa28.31■■■□□ 2.12
NEIL1-203ENST00000564257 CCDC88AQ3V6T2 1871 aa28.31■■■□□ 2.12
NEIL1-203ENST00000564257 ARFGEF2Q9Y6D5 1785 aa28.3■■■□□ 2.12
NEIL1-203ENST00000564257 ERVV-1B6SEH8 477 aa28.3■■■□□ 2.12
NEIL1-203ENST00000564257 TTLL7Q6ZT98 887 aa28.3■■■□□ 2.12
NEIL1-203ENST00000564257 TRIM35Q9UPQ4 493 aa28.3■■■□□ 2.12
NEIL1-203ENST00000564257 GTF2E1P29083 439 aaPredicted RBP28.29■■■□□ 2.12
NEIL1-203ENST00000564257 CNKSR1Q969H4 720 aa28.29■■■□□ 2.12
NEIL1-203ENST00000564257 MASTLQ96GX5 879 aa28.29■■■□□ 2.12
NEIL1-203ENST00000564257 ZBTB3Q9H5J0 574 aa28.29■■■□□ 2.12
NEIL1-203ENST00000564257 KIF3CO14782 793 aa28.28■■■□□ 2.12
NEIL1-203ENST00000564257 C21orf2O43822 256 aa28.28■■■□□ 2.12
NEIL1-203ENST00000564257 SRGNP10124 158 aa28.28■■■□□ 2.12
NEIL1-203ENST00000564257 STYK1Q6J9G0 422 aa28.28■■■□□ 2.12
NEIL1-203ENST00000564257 SLX4Q8IY92 1834 aa28.27■■■□□ 2.12
NEIL1-203ENST00000564257 TIAM2Q8IVF5 1701 aa28.27■■■□□ 2.12
NEIL1-203ENST00000564257 LMNB1P20700 586 aa28.27■■■□□ 2.12
NEIL1-203ENST00000564257 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
NEIL1-203ENST00000564257 KDM2BQ8NHM5 1336 aa28.25■■■□□ 2.11
NEIL1-203ENST00000564257 PRPF40BQ6NWY9 871 aaKnown RBP28.25■■■□□ 2.11
NEIL1-203ENST00000564257 NECTIN2Q92692 538 aa28.25■■■□□ 2.11
NEIL1-203ENST00000564257 NYXQ9GZU5 481 aa28.25■■■□□ 2.11
NEIL1-203ENST00000564257 NMRK2Q9NPI5 230 aa28.25■■■□□ 2.11
NEIL1-203ENST00000564257 NFKBIEO00221 500 aa28.24■■■□□ 2.11
NEIL1-203ENST00000564257 CHL1O00533 1208 aa28.24■■■□□ 2.11
NEIL1-203ENST00000564257 TNRC6CQ9HCJ0 1690 aaKnown RBP28.23■■■□□ 2.11
NEIL1-203ENST00000564257 GPTP24298 496 aa28.23■■■□□ 2.11
NEIL1-203ENST00000564257 ZC3H4Q9UPT8 1303 aaKnown RBP28.22■■■□□ 2.11
NEIL1-203ENST00000564257 ANXA1P04083 346 aa28.22■■■□□ 2.11
NEIL1-203ENST00000564257 NPR1P16066 1061 aa28.22■■■□□ 2.11
NEIL1-203ENST00000564257 PRELPP51888 382 aa28.21■■■□□ 2.11
NEIL1-203ENST00000564257 PDIA6Q15084 440 aa28.21■■■□□ 2.11
NEIL1-203ENST00000564257 KRT24Q2M2I5 525 aa28.21■■■□□ 2.11
NEIL1-203ENST00000564257 PROSER3Q2NL68 480 aa28.21■■■□□ 2.11
NEIL1-203ENST00000564257 NUTM1Q86Y26 1132 aa28.21■■■□□ 2.11
NEIL1-203ENST00000564257 APAF1O14727 1248 aa28.2■■■□□ 2.1
NEIL1-203ENST00000564257 SOGA3Q5TF21 947 aa28.2■■■□□ 2.1
NEIL1-203ENST00000564257 GIGYF2Q6Y7W6 1299 aaKnown RBP28.2■■■□□ 2.1
NEIL1-203ENST00000564257 UBN2Q6ZU65 1347 aa28.19■■■□□ 2.1
NEIL1-203ENST00000564257 KLRG2A4D1S0 409 aaPredicted RBP28.19■■■□□ 2.1
NEIL1-203ENST00000564257 C16orf71Q8IYS4 520 aaPredicted RBP28.19■■■□□ 2.1
NEIL1-203ENST00000564257 TAOK3Q9H2K8 898 aa28.19■■■□□ 2.1
NEIL1-203ENST00000564257 ABCC12Q96J65 1359 aa28.19■■■□□ 2.1
NEIL1-203ENST00000564257 DICER1Q9UPY3 1922 aaKnown RBP28.18■■■□□ 2.1
NEIL1-203ENST00000564257 TOMM70O94826 608 aa28.18■■■□□ 2.1
NEIL1-203ENST00000564257 LRP10Q7Z4F1 713 aa28.18■■■□□ 2.1
NEIL1-203ENST00000564257 CFAP44Q96MT7 982 aa28.18■■■□□ 2.1
NEIL1-203ENST00000564257 IBTKQ9P2D0 1353 aaPredicted RBP28.18■■■□□ 2.1
NEIL1-203ENST00000564257 ANKRD36CQ5JPF3 1778 aa28.18■■■□□ 2.1
NEIL1-203ENST00000564257 ZNF316A6NFI3 1004 aaPredicted RBP28.17■■■□□ 2.1
NEIL1-203ENST00000564257 AIMP1Q12904 312 aaKnown RBP28.17■■■□□ 2.1
NEIL1-203ENST00000564257 ERFEQ4G0M1 354 aa28.17■■■□□ 2.1
NEIL1-203ENST00000564257 ZNF34Q8IZ26 560 aa28.17■■■□□ 2.1
NEIL1-203ENST00000564257 SUSD4Q5VX71 490 aa28.16■■■□□ 2.1
NEIL1-203ENST00000564257 CALD1Q05682 793 aaKnown RBP28.15■■■□□ 2.1
NEIL1-203ENST00000564257 HDGFL1Q5TGJ6 251 aa28.15■■■□□ 2.1
NEIL1-203ENST00000564257 COPS6Q7L5N1 327 aa28.15■■■□□ 2.1
NEIL1-203ENST00000564257 PPP1R42Q7Z4L9 355 aa28.15■■■□□ 2.1
NEIL1-203ENST00000564257 XAGE3Q8WTP9 111 aa28.15■■■□□ 2.1
NEIL1-203ENST00000564257 RRAGCQ9HB90 399 aa28.15■■■□□ 2.1
NEIL1-203ENST00000564257 DDX21Q9NR30 783 aaKnown RBP eCLIP28.15■■■□□ 2.1
NEIL1-203ENST00000564257 LTBP3Q9NS15 1303 aa28.15■■■□□ 2.1
NEIL1-203ENST00000564257 HSPA6P17066 643 aa28.14■■■□□ 2.1
NEIL1-203ENST00000564257 ALDH1B1P30837 517 aa28.14■■■□□ 2.1
NEIL1-203ENST00000564257 PARP10Q53GL7 1025 aa28.14■■■□□ 2.1
NEIL1-203ENST00000564257 CCDC93Q567U6 631 aa28.14■■■□□ 2.1
NEIL1-203ENST00000564257 MBIPQ9NS73 344 aa28.14■■■□□ 2.1
NEIL1-203ENST00000564257 HOXB7P09629 217 aa28.13■■■□□ 2.09
NEIL1-203ENST00000564257 CHPF2Q9P2E5 772 aa28.13■■■□□ 2.09
NEIL1-203ENST00000564257 RIC1Q4ADV7 1423 aa28.12■■■□□ 2.09
NEIL1-203ENST00000564257 GLTPD2A6NH11 291 aa28.12■■■□□ 2.09
NEIL1-203ENST00000564257 NTSR2O95665 410 aa28.12■■■□□ 2.09
NEIL1-203ENST00000564257 CCDC184Q52MB2 194 aa28.12■■■□□ 2.09
NEIL1-203ENST00000564257 RPGRQ92834 1020 aaKnown RBP28.12■■■□□ 2.09
NEIL1-203ENST00000564257 HSP90AB3PQ58FF7 597 aa28.11■■■□□ 2.09
NEIL1-203ENST00000564257 C7orf43Q8WVR3 580 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms