RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 KDM2BQ8NHM5 1336 aa22.11■■□□□ 1.13
TNRC6A-209ENST00000562829 RIPK4P57078 832 aa22.11■■□□□ 1.13
TNRC6A-209ENST00000562829 NGEFQ8N5V2 710 aa22.11■■□□□ 1.13
TNRC6A-209ENST00000562829 NIP7Q9Y221 180 aaKnown RBP eCLIP22.11■■□□□ 1.13
TNRC6A-209ENST00000562829 HSPA6P17066 643 aa22.1■■□□□ 1.13
TNRC6A-209ENST00000562829 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
TNRC6A-209ENST00000562829 FAM177BA6PVY3 158 aa22.09■■□□□ 1.13
TNRC6A-209ENST00000562829 LMNB1P20700 586 aa22.09■■□□□ 1.13
TNRC6A-209ENST00000562829 C16orf71Q8IYS4 520 aaPredicted RBP22.09■■□□□ 1.13
TNRC6A-209ENST00000562829 TSPYL4Q9UJ04 414 aa22.09■■□□□ 1.13
TNRC6A-209ENST00000562829 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
TNRC6A-209ENST00000562829 C21orf2O43822 256 aa22.08■■□□□ 1.13
TNRC6A-209ENST00000562829 TOMM70O94826 608 aa22.08■■□□□ 1.13
TNRC6A-209ENST00000562829 CCDC88AQ3V6T2 1871 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 NFKBIEO00221 500 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 MYL6BP14649 208 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 HLFQ16534 295 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 CNKSR1Q969H4 720 aa22.07■■□□□ 1.12
TNRC6A-209ENST00000562829 RGL2O15211 777 aa22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 TMPOP42166 694 aaKnown RBP22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 STYK1Q6J9G0 422 aa22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 TPTE2Q6XPS3 522 aa22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 KIF6Q6ZMV9 814 aa22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 MASTLQ96GX5 879 aa22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
TNRC6A-209ENST00000562829 SRGNP10124 158 aa22.05■■□□□ 1.12
TNRC6A-209ENST00000562829 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
TNRC6A-209ENST00000562829 NEUROD2Q15784 382 aa22.05■■□□□ 1.12
TNRC6A-209ENST00000562829 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
TNRC6A-209ENST00000562829 TNRC6CQ9HCJ0 1690 aaKnown RBP22.04■■□□□ 1.12
TNRC6A-209ENST00000562829 PRELPP51888 382 aa22.04■■□□□ 1.12
TNRC6A-209ENST00000562829 PRPF40BQ6NWY9 871 aaKnown RBP22.04■■□□□ 1.12
TNRC6A-209ENST00000562829 RRAGCQ9HB90 399 aa22.04■■□□□ 1.12
TNRC6A-209ENST00000562829 TTLL7Q6ZT98 887 aa22.03■■□□□ 1.12
TNRC6A-209ENST00000562829 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
TNRC6A-209ENST00000562829 MAP3K15Q6ZN16 1313 aa22.03■■□□□ 1.12
TNRC6A-209ENST00000562829 ARFGEF2Q9Y6D5 1785 aa22.02■■□□□ 1.12
TNRC6A-209ENST00000562829 ZBTB3Q9H5J0 574 aa22.02■■□□□ 1.12
TNRC6A-209ENST00000562829 FER1L6Q2WGJ9 1857 aa22.02■■□□□ 1.12
TNRC6A-209ENST00000562829 NUP98P52948 1817 aa22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 ERVV-1B6SEH8 477 aa22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 NPR1P16066 1061 aa22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 EIF2S2P20042 333 aaKnown RBP22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 SOGA3Q5TF21 947 aa22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 RBM46Q8TBY0 533 aaKnown RBP22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 TAOK3Q9H2K8 898 aa22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 ERBB4Q15303 1308 aa22.01■■□□□ 1.11
TNRC6A-209ENST00000562829 RUNDC1Q96C34 613 aa22■■□□□ 1.11
TNRC6A-209ENST00000562829 NYXQ9GZU5 481 aa22■■□□□ 1.11
TNRC6A-209ENST00000562829 GLTPD2A6NH11 291 aa21.99■■□□□ 1.11
TNRC6A-209ENST00000562829 GPTP24298 496 aa21.99■■□□□ 1.11
TNRC6A-209ENST00000562829 ERFEQ4G0M1 354 aa21.99■■□□□ 1.11
TNRC6A-209ENST00000562829 BABAM1Q9NWV8 329 aa21.99■■□□□ 1.11
TNRC6A-209ENST00000562829 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
TNRC6A-209ENST00000562829 NUTM1Q86Y26 1132 aa21.98■■□□□ 1.11
TNRC6A-209ENST00000562829 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
TNRC6A-209ENST00000562829 APLP1P51693 650 aa21.97■■□□□ 1.11
TNRC6A-209ENST00000562829 CCDC93Q567U6 631 aa21.97■■□□□ 1.11
TNRC6A-209ENST00000562829 ADAMTS8Q9UP79 889 aa21.97■■□□□ 1.11
TNRC6A-209ENST00000562829 DICER1Q9UPY3 1922 aaKnown RBP21.97■■□□□ 1.11
TNRC6A-209ENST00000562829 LTBP3Q9NS15 1303 aa21.97■■□□□ 1.11
TNRC6A-209ENST00000562829 KLRG2A4D1S0 409 aaPredicted RBP21.96■■□□□ 1.11
TNRC6A-209ENST00000562829 DPY19L2Q6NUT2 758 aa21.96■■□□□ 1.11
TNRC6A-209ENST00000562829 NECTIN2Q92692 538 aa21.96■■□□□ 1.11
TNRC6A-209ENST00000562829 ABCC12Q96J65 1359 aa21.96■■□□□ 1.11
TNRC6A-209ENST00000562829 ANXA1P04083 346 aa21.95■■□□□ 1.1
TNRC6A-209ENST00000562829 VEGFAP15692 232 aaPredicted RBP21.95■■□□□ 1.1
TNRC6A-209ENST00000562829 CEP350Q5VT06 3117 aa21.94■■□□□ 1.1
TNRC6A-209ENST00000562829 FSTL1Q12841 308 aa21.94■■□□□ 1.1
TNRC6A-209ENST00000562829 GIGYF2Q6Y7W6 1299 aaKnown RBP21.94■■□□□ 1.1
TNRC6A-209ENST00000562829 UBN2Q6ZU65 1347 aa21.94■■□□□ 1.1
TNRC6A-209ENST00000562829 ALDH1B1P30837 517 aa21.93■■□□□ 1.1
TNRC6A-209ENST00000562829 PROSER3Q2NL68 480 aa21.93■■□□□ 1.1
TNRC6A-209ENST00000562829 SUSD4Q5VX71 490 aa21.93■■□□□ 1.1
TNRC6A-209ENST00000562829 TRIM35Q9UPQ4 493 aa21.93■■□□□ 1.1
TNRC6A-209ENST00000562829 IBTKQ9P2D0 1353 aaPredicted RBP21.92■■□□□ 1.1
TNRC6A-209ENST00000562829 PDIA6Q15084 440 aa21.92■■□□□ 1.1
TNRC6A-209ENST00000562829 SMC1BQ8NDV3 1235 aa21.92■■□□□ 1.1
TNRC6A-209ENST00000562829 C7orf43Q8WVR3 580 aa21.92■■□□□ 1.1
TNRC6A-209ENST00000562829 RPGRQ92834 1020 aaKnown RBP21.92■■□□□ 1.1
TNRC6A-209ENST00000562829 CHL1O00533 1208 aa21.91■■□□□ 1.1
TNRC6A-209ENST00000562829 AIMP1Q12904 312 aaKnown RBP21.91■■□□□ 1.1
TNRC6A-209ENST00000562829 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
TNRC6A-209ENST00000562829 OLFM4Q6UX06 510 aa21.91■■□□□ 1.1
TNRC6A-209ENST00000562829 PPP1R42Q7Z4L9 355 aa21.91■■□□□ 1.1
TNRC6A-209ENST00000562829 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
TNRC6A-209ENST00000562829 WDR90Q96KV7 1748 aa21.9■■□□□ 1.1
TNRC6A-209ENST00000562829 FKBP4Q02790 459 aaKnown RBP eCLIP21.9■■□□□ 1.1
TNRC6A-209ENST00000562829 PARP10Q53GL7 1025 aa21.9■■□□□ 1.1
TNRC6A-209ENST00000562829 LRP10Q7Z4F1 713 aa21.9■■□□□ 1.1
TNRC6A-209ENST00000562829 NTSR2O95665 410 aa21.89■■□□□ 1.09
TNRC6A-209ENST00000562829 CRY2Q49AN0 593 aa21.89■■□□□ 1.09
TNRC6A-209ENST00000562829 RTKN2Q8IZC4 609 aa21.89■■□□□ 1.09
TNRC6A-209ENST00000562829 XAGE3Q8WTP9 111 aa21.89■■□□□ 1.09
TNRC6A-209ENST00000562829 COPS6Q7L5N1 327 aa21.88■■□□□ 1.09
TNRC6A-209ENST00000562829 ZNF277Q9NRM2 450 aaPredicted RBP21.88■■□□□ 1.09
TNRC6A-209ENST00000562829 RIC1Q4ADV7 1423 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms