RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GPBP1L1Q9HC44 474 aaPredicted RBP22.62■■□□□ 1.21
CDC42BPB-208ENST00000561271 RUNDC1Q96C34 613 aa22.61■■□□□ 1.21
CDC42BPB-208ENST00000561271 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
CDC42BPB-208ENST00000561271 ZNF652Q9Y2D9 606 aa22.61■■□□□ 1.21
CDC42BPB-208ENST00000561271 LAMB2P55268 1798 aa22.61■■□□□ 1.21
CDC42BPB-208ENST00000561271 NPHP1O15259 732 aa22.6■■□□□ 1.21
CDC42BPB-208ENST00000561271 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
CDC42BPB-208ENST00000561271 H0YIN7 160 aa22.59■■□□□ 1.21
CDC42BPB-208ENST00000561271 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
CDC42BPB-208ENST00000561271 CLEC4GQ6UXB4 293 aa22.58■■□□□ 1.21
CDC42BPB-208ENST00000561271 BRIP1Q9BX63 1249 aa22.58■■□□□ 1.21
CDC42BPB-208ENST00000561271 MYL6BP14649 208 aa22.57■■□□□ 1.2
CDC42BPB-208ENST00000561271 ST5P78524 1137 aa22.57■■□□□ 1.2
CDC42BPB-208ENST00000561271 HLFQ16534 295 aa22.57■■□□□ 1.2
CDC42BPB-208ENST00000561271 TTLL6Q8N841 843 aa22.57■■□□□ 1.2
CDC42BPB-208ENST00000561271 PDE6BP35913 854 aa22.56■■□□□ 1.2
CDC42BPB-208ENST00000561271 RASSF7Q02833 373 aa22.56■■□□□ 1.2
CDC42BPB-208ENST00000561271 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
CDC42BPB-208ENST00000561271 NBPF5PQ86XG9 351 aaPredicted RBP22.56■■□□□ 1.2
CDC42BPB-208ENST00000561271 TRIM35Q9UPQ4 493 aa22.56■■□□□ 1.2
CDC42BPB-208ENST00000561271 NIP7Q9Y221 180 aaKnown RBP eCLIP22.56■■□□□ 1.2
CDC42BPB-208ENST00000561271 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
CDC42BPB-208ENST00000561271 ZNF622Q969S3 477 aaKnown RBP eCLIP22.55■■□□□ 1.23e-6■□□□□ 10.4
CDC42BPB-208ENST00000561271 FAM177BA6PVY3 158 aa22.54■■□□□ 1.2
CDC42BPB-208ENST00000561271 RGL2O15211 777 aa22.54■■□□□ 1.2
CDC42BPB-208ENST00000561271 BABAM1Q9NWV8 329 aa22.54■■□□□ 1.2
CDC42BPB-208ENST00000561271 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
CDC42BPB-208ENST00000561271 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
CDC42BPB-208ENST00000561271 MAP3K15Q6ZN16 1313 aa22.54■■□□□ 1.2
CDC42BPB-208ENST00000561271 KIF6Q6ZMV9 814 aa22.53■■□□□ 1.2
CDC42BPB-208ENST00000561271 PDZRN3Q9UPQ7 1066 aa22.53■■□□□ 1.2
CDC42BPB-208ENST00000561271 EIF2S2P20042 333 aaKnown RBP22.52■■□□□ 1.2
CDC42BPB-208ENST00000561271 ZBTB3Q9H5J0 574 aa22.52■■□□□ 1.2
CDC42BPB-208ENST00000561271 LAS1LQ9Y4W2 734 aaKnown RBP22.52■■□□□ 1.2
CDC42BPB-208ENST00000561271 SENP3-EIF4A1A0A087X0R7 540 aa22.51■■□□□ 1.19
CDC42BPB-208ENST00000561271 KRT24Q2M2I5 525 aa22.51■■□□□ 1.19
CDC42BPB-208ENST00000561271 ZNF219Q9P2Y4 722 aaPredicted RBP22.51■■□□□ 1.19
CDC42BPB-208ENST00000561271 ABCC12Q96J65 1359 aa22.5■■□□□ 1.19
CDC42BPB-208ENST00000561271 ANXA1P04083 346 aa22.5■■□□□ 1.19
CDC42BPB-208ENST00000561271 PROSER3Q2NL68 480 aa22.5■■□□□ 1.19
CDC42BPB-208ENST00000561271 NECTIN2Q92692 538 aa22.5■■□□□ 1.19
CDC42BPB-208ENST00000561271 TAF1P21675 1872 aa22.49■■□□□ 1.19
CDC42BPB-208ENST00000561271 ERVV-1B6SEH8 477 aa22.49■■□□□ 1.19
CDC42BPB-208ENST00000561271 CHL1O00533 1208 aa22.49■■□□□ 1.19
CDC42BPB-208ENST00000561271 SRGNP10124 158 aa22.49■■□□□ 1.19
CDC42BPB-208ENST00000561271 PRELPP51888 382 aa22.49■■□□□ 1.19
CDC42BPB-208ENST00000561271 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
CDC42BPB-208ENST00000561271 DDX60Q8IY21 1712 aaKnown RBP22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 NFKBIEO00221 500 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 APAF1O14727 1248 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 KIF3CO14782 793 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 C21orf2O43822 256 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 PDIA6Q15084 440 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 STYK1Q6J9G0 422 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 UBN2Q6ZU65 1347 aa22.48■■□□□ 1.19
CDC42BPB-208ENST00000561271 ZNF316A6NFI3 1004 aaPredicted RBP22.47■■□□□ 1.19
CDC42BPB-208ENST00000561271 GPTP24298 496 aa22.47■■□□□ 1.19
CDC42BPB-208ENST00000561271 PRPF40BQ6NWY9 871 aaKnown RBP22.47■■□□□ 1.19
CDC42BPB-208ENST00000561271 MASTLQ96GX5 879 aa22.47■■□□□ 1.19
CDC42BPB-208ENST00000561271 NMRK2Q9NPI5 230 aa22.47■■□□□ 1.19
CDC42BPB-208ENST00000561271 LMNB1P20700 586 aa22.46■■□□□ 1.19
CDC42BPB-208ENST00000561271 CNKSR1Q969H4 720 aa22.46■■□□□ 1.19
CDC42BPB-208ENST00000561271 IBTKQ9P2D0 1353 aaPredicted RBP22.46■■□□□ 1.19
CDC42BPB-208ENST00000561271 NUTM1Q86Y26 1132 aa22.45■■□□□ 1.18
CDC42BPB-208ENST00000561271 GTF2E1P29083 439 aaPredicted RBP22.44■■□□□ 1.18
CDC42BPB-208ENST00000561271 RIC1Q4ADV7 1423 aa22.44■■□□□ 1.18
CDC42BPB-208ENST00000561271 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
CDC42BPB-208ENST00000561271 NPR1P16066 1061 aa22.43■■□□□ 1.18
CDC42BPB-208ENST00000561271 GIGYF2Q6Y7W6 1299 aaKnown RBP22.43■■□□□ 1.18
CDC42BPB-208ENST00000561271 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
CDC42BPB-208ENST00000561271 NYXQ9GZU5 481 aa22.43■■□□□ 1.18
CDC42BPB-208ENST00000561271 ZC3H4Q9UPT8 1303 aaKnown RBP22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 CACNA1FO60840 1977 aa22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 KLRG2A4D1S0 409 aaPredicted RBP22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 ERFEQ4G0M1 354 aa22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 ZNF34Q8IZ26 560 aa22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 CHPF2Q9P2E5 772 aa22.42■■□□□ 1.18
CDC42BPB-208ENST00000561271 KDM2BQ8NHM5 1336 aa22.41■■□□□ 1.18
CDC42BPB-208ENST00000561271 HDGFL1Q5TGJ6 251 aa22.41■■□□□ 1.18
CDC42BPB-208ENST00000561271 SUSD4Q5VX71 490 aa22.41■■□□□ 1.18
CDC42BPB-208ENST00000561271 XAGE3Q8WTP9 111 aa22.41■■□□□ 1.18
CDC42BPB-208ENST00000561271 CEP350Q5VT06 3117 aa22.41■■□□□ 1.18
CDC42BPB-208ENST00000561271 NTSR2O95665 410 aa22.4■■□□□ 1.18
CDC42BPB-208ENST00000561271 AIMP1Q12904 312 aaKnown RBP22.4■■□□□ 1.18
CDC42BPB-208ENST00000561271 COPS6Q7L5N1 327 aa22.4■■□□□ 1.18
CDC42BPB-208ENST00000561271 TAOK3Q9H2K8 898 aa22.4■■□□□ 1.18
CDC42BPB-208ENST00000561271 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
CDC42BPB-208ENST00000561271 LTBP3Q9NS15 1303 aa22.38■■□□□ 1.17
CDC42BPB-208ENST00000561271 HOXB7P09629 217 aa22.38■■□□□ 1.17
CDC42BPB-208ENST00000561271 ZNF853P0CG23 659 aa22.38■■□□□ 1.17
CDC42BPB-208ENST00000561271 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
CDC42BPB-208ENST00000561271 IFT57Q9NWB7 429 aa22.38■■□□□ 1.17
CDC42BPB-208ENST00000561271 SCN4AP35499 1836 aa22.37■■□□□ 1.17
CDC42BPB-208ENST00000561271 CRY2Q49AN0 593 aa22.37■■□□□ 1.17
CDC42BPB-208ENST00000561271 SOGA3Q5TF21 947 aa22.37■■□□□ 1.17
CDC42BPB-208ENST00000561271 OLFM4Q6UX06 510 aa22.37■■□□□ 1.17
CDC42BPB-208ENST00000561271 MRS2Q9HD23 443 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms