RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF521Q96K83 1311 aa18.08■□□□□ 0.49
TPM1-230ENST00000561266 UTRNP46939 3433 aa18.08■□□□□ 0.48
TPM1-230ENST00000561266 SERPINB2P05120 415 aa18.08■□□□□ 0.48
TPM1-230ENST00000561266 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
TPM1-230ENST00000561266 CCDC24Q8N4L8 307 aa18.08■□□□□ 0.48
TPM1-230ENST00000561266 CHPF2Q9P2E5 772 aa18.08■□□□□ 0.48
TPM1-230ENST00000561266 BRCA1P38398 1863 aaKnown RBP18.07■□□□□ 0.48
TPM1-230ENST00000561266 IL16Q14005 1332 aa18.07■□□□□ 0.48
TPM1-230ENST00000561266 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
TPM1-230ENST00000561266 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
TPM1-230ENST00000561266 MAP3K15Q6ZN16 1313 aa18.06■□□□□ 0.48
TPM1-230ENST00000561266 A0A0G2JLW4 131 aa18.06■□□□□ 0.48
TPM1-230ENST00000561266 KCNA3P22001 575 aa18.06■□□□□ 0.48
TPM1-230ENST00000561266 HDGFL1Q5TGJ6 251 aa18.06■□□□□ 0.48
TPM1-230ENST00000561266 WDR63Q8IWG1 891 aa18.06■□□□□ 0.48
TPM1-230ENST00000561266 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
TPM1-230ENST00000561266 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
TPM1-230ENST00000561266 HOXB7P09629 217 aa18.05■□□□□ 0.48
TPM1-230ENST00000561266 DPEP1P16444 411 aa18.05■□□□□ 0.48
TPM1-230ENST00000561266 NPM2Q86SE8 214 aaKnown RBP18.05■□□□□ 0.48
TPM1-230ENST00000561266 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
TPM1-230ENST00000561266 DDX21Q9NR30 783 aaKnown RBP eCLIP18.05■□□□□ 0.48
TPM1-230ENST00000561266 AIMP1Q12904 312 aaKnown RBP18.04■□□□□ 0.48
TPM1-230ENST00000561266 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
TPM1-230ENST00000561266 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
TPM1-230ENST00000561266 TCERG1O14776 1098 aaKnown RBP18.03■□□□□ 0.48
TPM1-230ENST00000561266 CHRNA5P30532 468 aa18.03■□□□□ 0.48
TPM1-230ENST00000561266 PRR5LQ6MZQ0 368 aa18.03■□□□□ 0.48
TPM1-230ENST00000561266 ERVV-1B6SEH8 477 aa18.02■□□□□ 0.48
TPM1-230ENST00000561266 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.48
TPM1-230ENST00000561266 SETDB2Q96T68 719 aa18.02■□□□□ 0.48
TPM1-230ENST00000561266 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
TPM1-230ENST00000561266 NIP7Q9Y221 180 aaKnown RBP eCLIP18.02■□□□□ 0.48
TPM1-230ENST00000561266 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
TPM1-230ENST00000561266 COL11A2P13942 1736 aaPredicted RBP18.01■□□□□ 0.47
TPM1-230ENST00000561266 FAM177BA6PVY3 158 aa18.01■□□□□ 0.47
TPM1-230ENST00000561266 TGFB2P61812 414 aa18.01■□□□□ 0.47
TPM1-230ENST00000561266 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
TPM1-230ENST00000561266 KIF6Q6ZMV9 814 aa18.01■□□□□ 0.47
TPM1-230ENST00000561266 ANKRD36CQ5JPF3 1778 aa18.01■□□□□ 0.47
TPM1-230ENST00000561266 DLEC1Q9Y238 1755 aa18■□□□□ 0.47
TPM1-230ENST00000561266 GPTP24298 496 aa18■□□□□ 0.47
TPM1-230ENST00000561266 GPR162Q16538 588 aa18■□□□□ 0.47
TPM1-230ENST00000561266 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
TPM1-230ENST00000561266 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
TPM1-230ENST00000561266 ATP10DQ9P241 1426 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 RGL2O15211 777 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 VAMP4O75379 141 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 TWISTNBQ3B726 338 aaPredicted RBP17.99■□□□□ 0.47
TPM1-230ENST00000561266 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 ARFGEF2Q9Y6D5 1785 aa17.99■□□□□ 0.47
TPM1-230ENST00000561266 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
TPM1-230ENST00000561266 CHD4Q14839 1912 aa17.98■□□□□ 0.47
TPM1-230ENST00000561266 TNRC6CQ9HCJ0 1690 aaKnown RBP17.97■□□□□ 0.47
TPM1-230ENST00000561266 G2E3Q7L622 706 aa17.97■□□□□ 0.47
TPM1-230ENST00000561266 ABCC12Q96J65 1359 aa17.96■□□□□ 0.47
TPM1-230ENST00000561266 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
TPM1-230ENST00000561266 NBPF5PQ86XG9 351 aaPredicted RBP17.96■□□□□ 0.47
TPM1-230ENST00000561266 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
TPM1-230ENST00000561266 CNBD1Q8NA66 436 aa17.96■□□□□ 0.47
TPM1-230ENST00000561266 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
TPM1-230ENST00000561266 CACNA1SQ13698 1873 aa17.96■□□□□ 0.47
TPM1-230ENST00000561266 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
TPM1-230ENST00000561266 CCDC30Q5VVM6 783 aa17.95■□□□□ 0.46
TPM1-230ENST00000561266 C2CD5Q86YS7 1000 aa17.95■□□□□ 0.46
TPM1-230ENST00000561266 SYNE4Q8N205 404 aa17.95■□□□□ 0.46
TPM1-230ENST00000561266 NTSR2O95665 410 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 TCIRG1Q13488 830 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
TPM1-230ENST00000561266 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
TPM1-230ENST00000561266 SLX4Q8IY92 1834 aa17.93■□□□□ 0.46
TPM1-230ENST00000561266 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 TRMT2AQ8IZ69 625 aaKnown RBP17.92■□□□□ 0.46
TPM1-230ENST00000561266 MYH16Q9H6N6 1097 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 PIM2Q9P1W9 311 aa17.92■□□□□ 0.46
TPM1-230ENST00000561266 LAMB2P55268 1798 aa17.91■□□□□ 0.46
TPM1-230ENST00000561266 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
TPM1-230ENST00000561266 ISCA1Q9BUE6 129 aa17.91■□□□□ 0.46
TPM1-230ENST00000561266 ADCY9O60503 1353 aa17.91■□□□□ 0.46
TPM1-230ENST00000561266 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
TPM1-230ENST00000561266 H0YIN7 160 aa17.9■□□□□ 0.46
TPM1-230ENST00000561266 SRGNP10124 158 aa17.9■□□□□ 0.46
TPM1-230ENST00000561266 ST5P78524 1137 aa17.9■□□□□ 0.46
TPM1-230ENST00000561266 E9PSI1 815 aa17.89■□□□□ 0.45
TPM1-230ENST00000561266 NPHP1O15259 732 aa17.89■□□□□ 0.45
TPM1-230ENST00000561266 PDE6BP35913 854 aa17.89■□□□□ 0.45
TPM1-230ENST00000561266 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.456e-7■■□□□ 13.8
TPM1-230ENST00000561266 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms