RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 PDZRN3Q9UPQ7 1066 aa17.59■□□□□ 0.41
SHF-210ENST00000561239 GOLGB1Q14789 3259 aaKnown RBP17.59■□□□□ 0.41
SHF-210ENST00000561239 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
SHF-210ENST00000561239 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
SHF-210ENST00000561239 BCS1LQ9Y276 419 aa17.57■□□□□ 0.4
SHF-210ENST00000561239 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SHF-210ENST00000561239 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
SHF-210ENST00000561239 DALRD3Q5D0E6 543 aaKnown RBP17.56■□□□□ 0.4
SHF-210ENST00000561239 LRP10Q7Z4F1 713 aa17.56■□□□□ 0.4
SHF-210ENST00000561239 NRXN2Q9P2S2 1712 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 MYL6BP14649 208 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 EIF2S2P20042 333 aaKnown RBP17.55■□□□□ 0.4
SHF-210ENST00000561239 PDE6BP35913 854 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 ST5P78524 1137 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 PDIA6Q15084 440 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 CNBD1Q8NA66 436 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
SHF-210ENST00000561239 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 WWC3Q9ULE0 1092 aa17.55■□□□□ 0.4
SHF-210ENST00000561239 FANCIQ9NVI1 1328 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 BCORQ6W2J9 1755 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 N4BP2Q86UW6 1770 aaPredicted RBP17.54■□□□□ 0.4
SHF-210ENST00000561239 H0YIN7 160 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 KCNA3P22001 575 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
SHF-210ENST00000561239 AFDNP55196 1824 aaKnown RBP17.54■□□□□ 0.4
SHF-210ENST00000561239 MAP3K15Q6ZN16 1313 aa17.53■□□□□ 0.4
SHF-210ENST00000561239 KIAA1551Q9HCM1 1747 aa17.53■□□□□ 0.4
SHF-210ENST00000561239 TPTE2Q6XPS3 522 aa17.53■□□□□ 0.4
SHF-210ENST00000561239 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
SHF-210ENST00000561239 NIP7Q9Y221 180 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHF-210ENST00000561239 CHRNA5P30532 468 aa17.52■□□□□ 0.4
SHF-210ENST00000561239 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
SHF-210ENST00000561239 C2CD5Q86YS7 1000 aa17.52■□□□□ 0.4
SHF-210ENST00000561239 TSPYL6Q8N831 410 aa17.51■□□□□ 0.39
SHF-210ENST00000561239 GTF2E1P29083 439 aaPredicted RBP17.5■□□□□ 0.39
SHF-210ENST00000561239 HLFQ16534 295 aa17.5■□□□□ 0.39
SHF-210ENST00000561239 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
SHF-210ENST00000561239 ARHGAP27Q6ZUM4 889 aa17.5■□□□□ 0.39
SHF-210ENST00000561239 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
SHF-210ENST00000561239 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
SHF-210ENST00000561239 ZNF784Q8NCA9 323 aaPredicted RBP17.5■□□□□ 0.39
SHF-210ENST00000561239 NYXQ9GZU5 481 aa17.5■□□□□ 0.39
SHF-210ENST00000561239 MYH16Q9H6N6 1097 aa17.5■□□□□ 0.39
SHF-210ENST00000561239 DDX21Q9NR30 783 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHF-210ENST00000561239 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
SHF-210ENST00000561239 HDGFL1Q5TGJ6 251 aa17.49■□□□□ 0.39
SHF-210ENST00000561239 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
SHF-210ENST00000561239 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
SHF-210ENST00000561239 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
SHF-210ENST00000561239 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
SHF-210ENST00000561239 E9PSI1 815 aa17.48■□□□□ 0.39
SHF-210ENST00000561239 SLFN5Q08AF3 891 aa17.48■□□□□ 0.39
SHF-210ENST00000561239 HSP90AB3PQ58FF7 597 aa17.48■□□□□ 0.39
SHF-210ENST00000561239 ZBTB3Q9H5J0 574 aa17.48■□□□□ 0.39
SHF-210ENST00000561239 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
SHF-210ENST00000561239 GIGYF2Q6Y7W6 1299 aaKnown RBP17.47■□□□□ 0.39
SHF-210ENST00000561239 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
SHF-210ENST00000561239 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHF-210ENST00000561239 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
SHF-210ENST00000561239 ELL2O00472 640 aaPredicted RBP17.46■□□□□ 0.39
SHF-210ENST00000561239 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
SHF-210ENST00000561239 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
SHF-210ENST00000561239 COPS6Q7L5N1 327 aa17.46■□□□□ 0.39
SHF-210ENST00000561239 CNKSR1Q969H4 720 aa17.46■□□□□ 0.39
SHF-210ENST00000561239 MASTLQ96GX5 879 aa17.46■□□□□ 0.39
SHF-210ENST00000561239 HYPKQ9NX55 129 aa17.46■□□□□ 0.39
SHF-210ENST00000561239 ARFGEF1Q9Y6D6 1849 aa17.46■□□□□ 0.39
SHF-210ENST00000561239 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
SHF-210ENST00000561239 VAMP4O75379 141 aa17.45■□□□□ 0.38
SHF-210ENST00000561239 ANXA1P04083 346 aa17.45■□□□□ 0.38
SHF-210ENST00000561239 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
SHF-210ENST00000561239 PPP1R42Q7Z4L9 355 aa17.45■□□□□ 0.38
SHF-210ENST00000561239 CCDC24Q8N4L8 307 aa17.45■□□□□ 0.38
SHF-210ENST00000561239 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
SHF-210ENST00000561239 DLEC1Q9Y238 1755 aa17.44■□□□□ 0.38
SHF-210ENST00000561239 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
SHF-210ENST00000561239 AIMP1Q12904 312 aaKnown RBP17.44■□□□□ 0.38
SHF-210ENST00000561239 ZNF34Q8IZ26 560 aa17.44■□□□□ 0.38
SHF-210ENST00000561239 XAGE3Q8WTP9 111 aa17.44■□□□□ 0.38
SHF-210ENST00000561239 NUP98P52948 1817 aa17.43■□□□□ 0.38
SHF-210ENST00000561239 KLRG2A4D1S0 409 aaPredicted RBP17.43■□□□□ 0.38
SHF-210ENST00000561239 SRGNP10124 158 aa17.43■□□□□ 0.38
SHF-210ENST00000561239 HNRNPUQ00839 825 aaKnown RBP eCLIP17.43■□□□□ 0.38
SHF-210ENST00000561239 CCDC30Q5VVM6 783 aa17.43■□□□□ 0.38
SHF-210ENST00000561239 NPR1P16066 1061 aa17.42■□□□□ 0.38
SHF-210ENST00000561239 GPTP24298 496 aa17.42■□□□□ 0.38
SHF-210ENST00000561239 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
SHF-210ENST00000561239 RNF123Q5XPI4 1314 aa17.42■□□□□ 0.38
SHF-210ENST00000561239 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
SHF-210ENST00000561239 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
SHF-210ENST00000561239 ADCY9O60503 1353 aa17.41■□□□□ 0.38
SHF-210ENST00000561239 ALDH1B1P30837 517 aa17.41■□□□□ 0.38
SHF-210ENST00000561239 ANKRD13DQ6ZTN6 518 aa17.41■□□□□ 0.38
SHF-210ENST00000561239 PLBD2Q8NHP8 589 aa17.41■□□□□ 0.38
SHF-210ENST00000561239 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
SHF-210ENST00000561239 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
SHF-210ENST00000561239 SUSD4Q5VX71 490 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms