RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 ERVH48-1M5A8F1 160 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 ITGA6P23229 1130 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 RAB15P59190 212 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 NBPF20Q3BBV1 942 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 RNF20Q5VTR2 975 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 VWA5B2Q8N398 1253 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
HMG20A-212ENST00000560986 MPHOSPH9Q99550 1183 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 GLI2P10070 1586 aa8.09□□□□□ -1.11
HMG20A-212ENST00000560986 TONSLQ96HA7 1378 aa8.09□□□□□ -1.12
HMG20A-212ENST00000560986 RPRD2Q5VT52 1461 aaKnown RBP8.08□□□□□ -1.12
HMG20A-212ENST00000560986 ESPNB1AK53 854 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 EML3Q32P44 896 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 POLMQ9NP87 494 aaPredicted RBP8.08□□□□□ -1.12
HMG20A-212ENST00000560986 RRP7BPQ9NSQ0 103 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
HMG20A-212ENST00000560986 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 DOLKQ9UPQ8 538 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 UNC13BO14795 1591 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 ANKRD30BQ9BXX2 1392 aa8.08□□□□□ -1.12
HMG20A-212ENST00000560986 ATP10AO60312 1499 aa8.07□□□□□ -1.12
HMG20A-212ENST00000560986 ZNF518AQ6AHZ1 1483 aa8.07□□□□□ -1.12
HMG20A-212ENST00000560986 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
HMG20A-212ENST00000560986 SEPT12Q8IYM1 358 aa8.07□□□□□ -1.12
HMG20A-212ENST00000560986 EIF2AK4Q9P2K8 1649 aaKnown RBP8.07□□□□□ -1.12
HMG20A-212ENST00000560986 DENND4BO75064 1496 aaPredicted RBP8.06□□□□□ -1.12
HMG20A-212ENST00000560986 PZPP20742 1482 aa8.06□□□□□ -1.12
HMG20A-212ENST00000560986 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
HMG20A-212ENST00000560986 ATP5J2-PTCD1G3V325 749 aa8.06□□□□□ -1.12
HMG20A-212ENST00000560986 ADH1AP07327 375 aa8.06□□□□□ -1.12
HMG20A-212ENST00000560986 FOXD4L5Q5VV16 416 aaPredicted RBP8.06□□□□□ -1.12
HMG20A-212ENST00000560986 ZNF385CQ66K41 422 aaPredicted RBP8.06□□□□□ -1.12
HMG20A-212ENST00000560986 WHAMMQ8TF30 809 aa8.06□□□□□ -1.12
HMG20A-212ENST00000560986 TEX14Q8IWB6 1497 aa8.06□□□□□ -1.12
HMG20A-212ENST00000560986 INO80Q9ULG1 1556 aaPredicted RBP8.05□□□□□ -1.12
HMG20A-212ENST00000560986 ZFYVE16Q7Z3T8 1539 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 ARHGEF12Q9NZN5 1544 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 CDC14CA4D256 554 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L13C9JLJ4 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L12C9JPN9 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L11C9JVI0 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L21D6R901 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L18D6R9N7 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L22D6RA61 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L17D6RBQ6 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L19D6RCP7 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L20D6RJB6 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 SLURP2P0DP57 97 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 PTGIRP43119 386 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 USP17L24Q0WX57 530 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
HMG20A-212ENST00000560986 OXLD1Q5BKU9 147 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 SV2AQ7L0J3 742 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 KCTD17Q8N5Z5 321 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 ADGRL1O94910 1474 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 MLH3Q9UHC1 1453 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 KDM5CP41229 1560 aa8.05□□□□□ -1.12
HMG20A-212ENST00000560986 KDM6BO15054 1643 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 IQGAP3Q86VI3 1631 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 CARNS1A5YM72 827 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 RASA1P20936 1047 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 PTK7Q13308 1070 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
HMG20A-212ENST00000560986 CCDC125Q86Z20 511 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 CDCA7Q9BWT1 371 aaPredicted RBP8.04□□□□□ -1.12
HMG20A-212ENST00000560986 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 NOVA2Q9UNW9 492 aaKnown RBP8.04□□□□□ -1.12
HMG20A-212ENST00000560986 NOD1Q9Y239 953 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 NEURL4Q96JN8 1562 aa8.04□□□□□ -1.12
HMG20A-212ENST00000560986 CD109Q6YHK3 1445 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 ZBTB7CA1YPR0 619 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 HNRNPMP52272 730 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMG20A-212ENST00000560986 RASSF7Q02833 373 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 TRIM50Q86XT4 487 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 AEBP1Q8IUX7 1158 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 CUEDC1Q9NWM3 386 aaPredicted RBP8.03□□□□□ -1.12
HMG20A-212ENST00000560986 PCDHB11Q9Y5F2 797 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 ATP7AQ04656 1500 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 FAM135AQ9P2D6 1515 aa8.03□□□□□ -1.12
HMG20A-212ENST00000560986 SPAG9O60271 1321 aaKnown RBP8.03□□□□□ -1.12
HMG20A-212ENST00000560986 NUP155O75694 1391 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 TMEM164Q5U3C3 297 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 STK32AQ8WU08 396 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 CYLDQ9NQC7 956 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 BCORL1Q5H9F3 1711 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 POGZQ7Z3K3 1410 aa8.02□□□□□ -1.13
HMG20A-212ENST00000560986 DHX29Q7Z478 1369 aaKnown RBP8.01□□□□□ -1.13
HMG20A-212ENST00000560986 MAP3K4Q9Y6R4 1608 aa8.01□□□□□ -1.13
HMG20A-212ENST00000560986 LOC100996750A0A140TA64 210 aa8.01□□□□□ -1.13
HMG20A-212ENST00000560986 ARHGEF15O94989 841 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms