RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TGFB2P61812 414 aa19.84■□□□□ 0.77
SNRPA1-213ENST00000560856 DDX21Q9NR30 783 aaKnown RBP eCLIP19.84■□□□□ 0.77
SNRPA1-213ENST00000560856 PXDNLA1KZ92 1463 aa19.84■□□□□ 0.77
SNRPA1-213ENST00000560856 MAP3K15Q6ZN16 1313 aa19.83■□□□□ 0.77
SNRPA1-213ENST00000560856 TSPYL6Q8N831 410 aa19.83■□□□□ 0.77
SNRPA1-213ENST00000560856 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.77
SNRPA1-213ENST00000560856 ZNF521Q96K83 1311 aa19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 ELL2O00472 640 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 YBX3P16989 372 aaKnown RBP eCLIP19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 KCNA3P22001 575 aa19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 HDGFL1Q5TGJ6 251 aa19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 GOLGB1Q14789 3259 aaKnown RBP19.82■□□□□ 0.76
SNRPA1-213ENST00000560856 A0A0G2JLW4 131 aa19.81■□□□□ 0.76
SNRPA1-213ENST00000560856 DPEP1P16444 411 aa19.81■□□□□ 0.76
SNRPA1-213ENST00000560856 SETDB2Q96T68 719 aa19.81■□□□□ 0.76
SNRPA1-213ENST00000560856 ZNF652Q9Y2D9 606 aa19.81■□□□□ 0.76
SNRPA1-213ENST00000560856 CARMIL3Q8ND23 1372 aa19.81■□□□□ 0.76
SNRPA1-213ENST00000560856 UTRNP46939 3433 aa19.8■□□□□ 0.76
SNRPA1-213ENST00000560856 GPR162Q16538 588 aa19.8■□□□□ 0.76
SNRPA1-213ENST00000560856 PRR5LQ6MZQ0 368 aa19.8■□□□□ 0.76
SNRPA1-213ENST00000560856 COPS6Q7L5N1 327 aa19.8■□□□□ 0.76
SNRPA1-213ENST00000560856 XAGE3Q8WTP9 111 aa19.8■□□□□ 0.76
SNRPA1-213ENST00000560856 DCAF8L1A6NGE4 600 aa19.79■□□□□ 0.76
SNRPA1-213ENST00000560856 ZBTB3Q9H5J0 574 aa19.79■□□□□ 0.76
SNRPA1-213ENST00000560856 DBF4Q9UBU7 674 aaPredicted RBP19.79■□□□□ 0.76
SNRPA1-213ENST00000560856 FANCIQ9NVI1 1328 aa19.78■□□□□ 0.76
SNRPA1-213ENST00000560856 GIGYF2Q6Y7W6 1299 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-213ENST00000560856 KIF6Q6ZMV9 814 aa19.78■□□□□ 0.76
SNRPA1-213ENST00000560856 NIP7Q9Y221 180 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNRPA1-213ENST00000560856 N4BP2Q86UW6 1770 aaPredicted RBP19.78■□□□□ 0.76
SNRPA1-213ENST00000560856 ATP10DQ9P241 1426 aa19.77■□□□□ 0.76
SNRPA1-213ENST00000560856 NUP98P52948 1817 aa19.77■□□□□ 0.76
SNRPA1-213ENST00000560856 ZNF34Q8IZ26 560 aa19.77■□□□□ 0.76
SNRPA1-213ENST00000560856 CCDC24Q8N4L8 307 aa19.77■□□□□ 0.76
SNRPA1-213ENST00000560856 CHRNA5P30532 468 aa19.76■□□□□ 0.75
SNRPA1-213ENST00000560856 PELP1Q8IZL8 1130 aaKnown RBP19.76■□□□□ 0.75
SNRPA1-213ENST00000560856 WWC3Q9ULE0 1092 aa19.76■□□□□ 0.75
SNRPA1-213ENST00000560856 AIMP1Q12904 312 aaKnown RBP19.75■□□□□ 0.75
SNRPA1-213ENST00000560856 CNBD1Q8NA66 436 aa19.75■□□□□ 0.75
SNRPA1-213ENST00000560856 BRIP1Q9BX63 1249 aa19.75■□□□□ 0.75
SNRPA1-213ENST00000560856 HYPKQ9NX55 129 aa19.75■□□□□ 0.75
SNRPA1-213ENST00000560856 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
SNRPA1-213ENST00000560856 ANKRD31Q8N7Z5 1873 aa19.74■□□□□ 0.75
SNRPA1-213ENST00000560856 TWISTNBQ3B726 338 aaPredicted RBP19.74■□□□□ 0.75
SNRPA1-213ENST00000560856 NBPF5PQ86XG9 351 aaPredicted RBP19.74■□□□□ 0.75
SNRPA1-213ENST00000560856 BRCA1P38398 1863 aaKnown RBP19.73■□□□□ 0.75
SNRPA1-213ENST00000560856 GPTP24298 496 aa19.73■□□□□ 0.75
SNRPA1-213ENST00000560856 PHAXQ9H814 394 aaKnown RBP19.73■□□□□ 0.75
SNRPA1-213ENST00000560856 GRIN3BO60391 1043 aa19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 VAMP4O75379 141 aa19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 EXOSC9Q06265 439 aaKnown RBP19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 GOLGA2Q08379 1002 aa19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 CCDC30Q5VVM6 783 aa19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 TPTE2Q6XPS3 522 aa19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 PIM2Q9P1W9 311 aa19.72■□□□□ 0.75
SNRPA1-213ENST00000560856 KLRG2A4D1S0 409 aaPredicted RBP19.71■□□□□ 0.75
SNRPA1-213ENST00000560856 TCIRG1Q13488 830 aa19.71■□□□□ 0.75
SNRPA1-213ENST00000560856 SUSD4Q5VX71 490 aa19.71■□□□□ 0.75
SNRPA1-213ENST00000560856 ANKRD13DQ6ZTN6 518 aa19.71■□□□□ 0.75
SNRPA1-213ENST00000560856 C2CD5Q86YS7 1000 aa19.71■□□□□ 0.75
SNRPA1-213ENST00000560856 PLBD2Q8NHP8 589 aa19.71■□□□□ 0.75
SNRPA1-213ENST00000560856 FAM177BA6PVY3 158 aa19.7■□□□□ 0.74
SNRPA1-213ENST00000560856 CHMP4AQ9BY43 222 aa19.7■□□□□ 0.74
SNRPA1-213ENST00000560856 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
SNRPA1-213ENST00000560856 BCS1LQ9Y276 419 aa19.7■□□□□ 0.74
SNRPA1-213ENST00000560856 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
SNRPA1-213ENST00000560856 TCERG1O14776 1098 aaKnown RBP19.69■□□□□ 0.74
SNRPA1-213ENST00000560856 NTSR2O95665 410 aa19.69■□□□□ 0.74
SNRPA1-213ENST00000560856 PDE6BP35913 854 aa19.69■□□□□ 0.74
SNRPA1-213ENST00000560856 ST5P78524 1137 aa19.69■□□□□ 0.74
SNRPA1-213ENST00000560856 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
SNRPA1-213ENST00000560856 H0YIN7 160 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 PARP10Q53GL7 1025 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 HSP90AB3PQ58FF7 597 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 ISCA1Q9BUE6 129 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 NYXQ9GZU5 481 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 ABCC12Q96J65 1359 aa19.68■□□□□ 0.74
SNRPA1-213ENST00000560856 SLFN5Q08AF3 891 aa19.67■□□□□ 0.74
SNRPA1-213ENST00000560856 ERFEQ4G0M1 354 aa19.67■□□□□ 0.74
SNRPA1-213ENST00000560856 G2E3Q7L622 706 aa19.67■□□□□ 0.74
SNRPA1-213ENST00000560856 DLEC1Q9Y238 1755 aa19.67■□□□□ 0.74
SNRPA1-213ENST00000560856 NPHP1O15259 732 aa19.66■□□□□ 0.74
SNRPA1-213ENST00000560856 SRGNP10124 158 aa19.66■□□□□ 0.74
SNRPA1-213ENST00000560856 TRMT2AQ8IZ69 625 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-213ENST00000560856 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
SNRPA1-213ENST00000560856 CHD4Q14839 1912 aa19.66■□□□□ 0.74
SNRPA1-213ENST00000560856 COL11A2P13942 1736 aaPredicted RBP19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 E9PSI1 815 aa19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 TRIM28Q13263 835 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 PPP1R42Q7Z4L9 355 aa19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 TTLL6Q8N841 843 aa19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 STK31Q9BXU1 1019 aa19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 ANKRD36CQ5JPF3 1778 aa19.65■□□□□ 0.74
SNRPA1-213ENST00000560856 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
SNRPA1-213ENST00000560856 YY1P25490 414 aa19.64■□□□□ 0.73
SNRPA1-213ENST00000560856 SLC10A5Q5PT55 438 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms