RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 WDR43Q15061 677 aaKnown RBP eCLIP19.73■□□□□ 0.75
LINC00593-202ENST00000560853 PDZRN3Q9UPQ7 1066 aa19.73■□□□□ 0.75
LINC00593-202ENST00000560853 CEP350Q5VT06 3117 aa19.73■□□□□ 0.75
LINC00593-202ENST00000560853 RASSF7Q02833 373 aa19.73■□□□□ 0.75
LINC00593-202ENST00000560853 NEUROD2Q15784 382 aa19.73■□□□□ 0.75
LINC00593-202ENST00000560853 NBPF5PQ86XG9 351 aaPredicted RBP19.73■□□□□ 0.75
LINC00593-202ENST00000560853 KIF3CO14782 793 aa19.72■□□□□ 0.75
LINC00593-202ENST00000560853 LMOD3Q0VAK6 560 aa19.72■□□□□ 0.75
LINC00593-202ENST00000560853 PRKRIP1Q9H875 184 aaPredicted RBP19.72■□□□□ 0.75
LINC00593-202ENST00000560853 NIP7Q9Y221 180 aaKnown RBP eCLIP19.72■□□□□ 0.75
LINC00593-202ENST00000560853 COL11A2P13942 1736 aaPredicted RBP19.72■□□□□ 0.75
LINC00593-202ENST00000560853 SBF1O95248 1867 aa19.71■□□□□ 0.75
LINC00593-202ENST00000560853 MYL6BP14649 208 aa19.71■□□□□ 0.75
LINC00593-202ENST00000560853 HLFQ16534 295 aa19.71■□□□□ 0.75
LINC00593-202ENST00000560853 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
LINC00593-202ENST00000560853 FAM177BA6PVY3 158 aa19.7■□□□□ 0.74
LINC00593-202ENST00000560853 RGL2O15211 777 aa19.69■□□□□ 0.74
LINC00593-202ENST00000560853 RUNDC1Q96C34 613 aa19.69■□□□□ 0.74
LINC00593-202ENST00000560853 NMRK2Q9NPI5 230 aa19.69■□□□□ 0.74
LINC00593-202ENST00000560853 ADAMTS8Q9UP79 889 aa19.69■□□□□ 0.74
LINC00593-202ENST00000560853 C21orf2O43822 256 aa19.68■□□□□ 0.74
LINC00593-202ENST00000560853 TPTE2Q6XPS3 522 aa19.68■□□□□ 0.74
LINC00593-202ENST00000560853 KIF6Q6ZMV9 814 aa19.68■□□□□ 0.74
LINC00593-202ENST00000560853 TTLL7Q6ZT98 887 aa19.68■□□□□ 0.74
LINC00593-202ENST00000560853 SRGNP10124 158 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 LMNB1P20700 586 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 NFKBIEO00221 500 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 EIF2S2P20042 333 aaKnown RBP19.67■□□□□ 0.74
LINC00593-202ENST00000560853 PRELPP51888 382 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 CNKSR1Q969H4 720 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 MASTLQ96GX5 879 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
LINC00593-202ENST00000560853 MAP3K15Q6ZN16 1313 aa19.66■□□□□ 0.74
LINC00593-202ENST00000560853 ERVV-1B6SEH8 477 aa19.66■□□□□ 0.74
LINC00593-202ENST00000560853 ZBTB3Q9H5J0 574 aa19.66■□□□□ 0.74
LINC00593-202ENST00000560853 CACNA1SQ13698 1873 aa19.66■□□□□ 0.74
LINC00593-202ENST00000560853 KDM2BQ8NHM5 1336 aa19.66■□□□□ 0.74
LINC00593-202ENST00000560853 GTF2E1P29083 439 aaPredicted RBP19.65■□□□□ 0.74
LINC00593-202ENST00000560853 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
LINC00593-202ENST00000560853 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
LINC00593-202ENST00000560853 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
LINC00593-202ENST00000560853 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
LINC00593-202ENST00000560853 NUP98P52948 1817 aa19.64■□□□□ 0.74
LINC00593-202ENST00000560853 CCDC88AQ3V6T2 1871 aa19.64■□□□□ 0.74
LINC00593-202ENST00000560853 SLX4Q8IY92 1834 aa19.64■□□□□ 0.73
LINC00593-202ENST00000560853 GPTP24298 496 aa19.63■□□□□ 0.73
LINC00593-202ENST00000560853 TOMM70O94826 608 aa19.62■□□□□ 0.73
LINC00593-202ENST00000560853 NPR1P16066 1061 aa19.62■□□□□ 0.73
LINC00593-202ENST00000560853 HSPA6P17066 643 aa19.62■□□□□ 0.73
LINC00593-202ENST00000560853 NECTIN2Q92692 538 aa19.62■□□□□ 0.73
LINC00593-202ENST00000560853 ZC3H4Q9UPT8 1303 aaKnown RBP19.62■□□□□ 0.73
LINC00593-202ENST00000560853 CHL1O00533 1208 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 ANXA1P04083 346 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 PDIA6Q15084 440 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 NUTM1Q86Y26 1132 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
LINC00593-202ENST00000560853 NYXQ9GZU5 481 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 RRAGCQ9HB90 399 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 FER1L6Q2WGJ9 1857 aa19.61■□□□□ 0.73
LINC00593-202ENST00000560853 KLRG2A4D1S0 409 aaPredicted RBP19.6■□□□□ 0.73
LINC00593-202ENST00000560853 KRT24Q2M2I5 525 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 ARFGEF2Q9Y6D5 1785 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 UBN2Q6ZU65 1347 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 LRP10Q7Z4F1 713 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 TAOK3Q9H2K8 898 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 TIAM2Q8IVF5 1701 aa19.6■□□□□ 0.73
LINC00593-202ENST00000560853 ABCC12Q96J65 1359 aa19.59■□□□□ 0.73
LINC00593-202ENST00000560853 ERFEQ4G0M1 354 aa19.59■□□□□ 0.73
LINC00593-202ENST00000560853 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
LINC00593-202ENST00000560853 GIGYF2Q6Y7W6 1299 aaKnown RBP19.59■□□□□ 0.73
LINC00593-202ENST00000560853 SUSD4Q5VX71 490 aa19.58■□□□□ 0.72
LINC00593-202ENST00000560853 ZNF34Q8IZ26 560 aa19.58■□□□□ 0.72
LINC00593-202ENST00000560853 TNRC6CQ9HCJ0 1690 aaKnown RBP19.57■□□□□ 0.72
LINC00593-202ENST00000560853 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
LINC00593-202ENST00000560853 APAF1O14727 1248 aa19.57■□□□□ 0.72
LINC00593-202ENST00000560853 AIMP1Q12904 312 aaKnown RBP19.57■□□□□ 0.72
LINC00593-202ENST00000560853 LTBP3Q9NS15 1303 aa19.56■□□□□ 0.72
LINC00593-202ENST00000560853 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
LINC00593-202ENST00000560853 C7orf43Q8WVR3 580 aa19.56■□□□□ 0.72
LINC00593-202ENST00000560853 ALDH1B1P30837 517 aa19.55■□□□□ 0.72
LINC00593-202ENST00000560853 OLFM4Q6UX06 510 aa19.55■□□□□ 0.72
LINC00593-202ENST00000560853 COPS6Q7L5N1 327 aa19.55■□□□□ 0.72
LINC00593-202ENST00000560853 RBM46Q8TBY0 533 aaKnown RBP19.55■□□□□ 0.72
LINC00593-202ENST00000560853 XAGE3Q8WTP9 111 aa19.55■□□□□ 0.72
LINC00593-202ENST00000560853 CFAP44Q96MT7 982 aa19.55■□□□□ 0.72
LINC00593-202ENST00000560853 DICER1Q9UPY3 1922 aaKnown RBP19.55■□□□□ 0.72
LINC00593-202ENST00000560853 IBTKQ9P2D0 1353 aaPredicted RBP19.55■□□□□ 0.72
LINC00593-202ENST00000560853 NTSR2O95665 410 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 PARP10Q53GL7 1025 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
LINC00593-202ENST00000560853 CRY2Q49AN0 593 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 DPY19L2Q6NUT2 758 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 CHPF2Q9P2E5 772 aa19.54■□□□□ 0.72
LINC00593-202ENST00000560853 CCDC184Q52MB2 194 aa19.53■□□□□ 0.72
LINC00593-202ENST00000560853 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
LINC00593-202ENST00000560853 MBIPQ9NS73 344 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms