RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 DDR1Q08345 913 aa15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 IFT57Q9NWB7 429 aa15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 TBC1D2BQ9UPU7 963 aa15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 SALL2Q9Y467 1007 aaPredicted RBP15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
ALDH1A3-206ENST00000560555 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
ALDH1A3-206ENST00000560555 MMP10P09238 476 aa15.9■□□□□ 0.14
ALDH1A3-206ENST00000560555 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
ALDH1A3-206ENST00000560555 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
ALDH1A3-206ENST00000560555 RRAGCQ9HB90 399 aa15.9■□□□□ 0.14
ALDH1A3-206ENST00000560555 AFDNP55196 1824 aaKnown RBP15.89■□□□□ 0.13
ALDH1A3-206ENST00000560555 SMC1BQ8NDV3 1235 aa15.89■□□□□ 0.13
ALDH1A3-206ENST00000560555 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
ALDH1A3-206ENST00000560555 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
ALDH1A3-206ENST00000560555 BCORQ6W2J9 1755 aa15.88■□□□□ 0.13
ALDH1A3-206ENST00000560555 ANXA1P04083 346 aa15.88■□□□□ 0.13
ALDH1A3-206ENST00000560555 NFIXQ14938 502 aa15.88■□□□□ 0.13
ALDH1A3-206ENST00000560555 TSR2Q969E8 191 aaKnown RBP15.88■□□□□ 0.13
ALDH1A3-206ENST00000560555 KIF13BQ9NQT8 1826 aa15.88■□□□□ 0.13
ALDH1A3-206ENST00000560555 DPEP1P16444 411 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 GNAI1P63096 354 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 HLFQ16534 295 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 DUSP27Q5VZP5 1158 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 WDR63Q8IWG1 891 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 NRXN2Q9P2S2 1712 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 IL16Q14005 1332 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 NUP98P52948 1817 aa15.87■□□□□ 0.13
ALDH1A3-206ENST00000560555 SCN7AQ01118 1682 aa15.86■□□□□ 0.13
ALDH1A3-206ENST00000560555 POLRMTO00411 1230 aaKnown RBP15.86■□□□□ 0.13
ALDH1A3-206ENST00000560555 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
ALDH1A3-206ENST00000560555 TBC1D9BQ66K14 1250 aa15.86■□□□□ 0.13
ALDH1A3-206ENST00000560555 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
ALDH1A3-206ENST00000560555 DZIP3Q86Y13 1208 aaKnown RBP15.85■□□□□ 0.13
ALDH1A3-206ENST00000560555 NECTIN2Q92692 538 aa15.85■□□□□ 0.13
ALDH1A3-206ENST00000560555 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
ALDH1A3-206ENST00000560555 A0A087WZG4 1122 aa15.84■□□□□ 0.13
ALDH1A3-206ENST00000560555 ZPR1O75312 459 aa15.84■□□□□ 0.13
ALDH1A3-206ENST00000560555 HOXB7P09629 217 aa15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 MYL6BP14649 208 aa15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 KCNA3P22001 575 aa15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 NGEFQ8N5V2 710 aa15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 RNF181Q9P0P0 153 aa15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 ZNF330Q9Y3S2 320 aaPredicted RBP15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 ERBB4Q15303 1308 aa15.83■□□□□ 0.12
ALDH1A3-206ENST00000560555 DDX21Q9NR30 783 aaKnown RBP eCLIP15.82■□□□□ 0.12
ALDH1A3-206ENST00000560555 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
ALDH1A3-206ENST00000560555 FANCIQ9NVI1 1328 aa15.82■□□□□ 0.12
ALDH1A3-206ENST00000560555 VAMP4O75379 141 aa15.81■□□□□ 0.12
ALDH1A3-206ENST00000560555 N4BP2Q86UW6 1770 aaPredicted RBP15.81■□□□□ 0.12
ALDH1A3-206ENST00000560555 ANKRD31Q8N7Z5 1873 aa15.81■□□□□ 0.12
ALDH1A3-206ENST00000560555 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
ALDH1A3-206ENST00000560555 PCNTO95613 3336 aa15.81■□□□□ 0.12
ALDH1A3-206ENST00000560555 MAP3K15Q6ZN16 1313 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 SERPINB2P05120 415 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 CLEC4GQ6UXB4 293 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 BICDL1Q6ZP65 573 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 COPS6Q7L5N1 327 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 TRMT2AQ8IZ69 625 aaKnown RBP15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 PIM2Q9P1W9 311 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 PCDH10Q9P2E7 1040 aa15.8■□□□□ 0.12
ALDH1A3-206ENST00000560555 CARMIL3Q8ND23 1372 aa15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 ERVV-1B6SEH8 477 aa15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 RGL2O15211 777 aa15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 EXOSC9Q06265 439 aaKnown RBP15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 PARP3Q9Y6F1 533 aa15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 BRCA1P38398 1863 aaKnown RBP15.79■□□□□ 0.12
ALDH1A3-206ENST00000560555 SLFN5Q08AF3 891 aa15.78■□□□□ 0.12
ALDH1A3-206ENST00000560555 DALRD3Q5D0E6 543 aaKnown RBP15.78■□□□□ 0.12
ALDH1A3-206ENST00000560555 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
ALDH1A3-206ENST00000560555 CCDC24Q8N4L8 307 aa15.78■□□□□ 0.12
ALDH1A3-206ENST00000560555 PHAXQ9H814 394 aaKnown RBP15.78■□□□□ 0.12
ALDH1A3-206ENST00000560555 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
ALDH1A3-206ENST00000560555 VEGFAP15692 232 aaPredicted RBP15.77■□□□□ 0.12
ALDH1A3-206ENST00000560555 ZBTB3Q9H5J0 574 aa15.77■□□□□ 0.12
ALDH1A3-206ENST00000560555 DBF4Q9UBU7 674 aaPredicted RBP15.77■□□□□ 0.12
ALDH1A3-206ENST00000560555 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
ALDH1A3-206ENST00000560555 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
ALDH1A3-206ENST00000560555 PRR5LQ6MZQ0 368 aa15.76■□□□□ 0.11
ALDH1A3-206ENST00000560555 GIGYF2Q6Y7W6 1299 aaKnown RBP15.76■□□□□ 0.11
ALDH1A3-206ENST00000560555 G2E3Q7L622 706 aa15.76■□□□□ 0.11
ALDH1A3-206ENST00000560555 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
ALDH1A3-206ENST00000560555 GLTPD2A6NH11 291 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 CHRNA5P30532 468 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 GOLGA2Q08379 1002 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 SUSD4Q5VX71 490 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 SETDB2Q96T68 719 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 PRDM10Q9NQV6 1147 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 CACNA1FO60840 1977 aa15.74■□□□□ 0.11
ALDH1A3-206ENST00000560555 ANKRD36CQ5JPF3 1778 aa15.73■□□□□ 0.11
ALDH1A3-206ENST00000560555 FOXN1O15353 648 aa15.73■□□□□ 0.11
ALDH1A3-206ENST00000560555 HYPKQ9NX55 129 aa15.73■□□□□ 0.11
ALDH1A3-206ENST00000560555 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
ALDH1A3-206ENST00000560555 ZC3H4Q9UPT8 1303 aaKnown RBP15.72■□□□□ 0.11
ALDH1A3-206ENST00000560555 KLRG2A4D1S0 409 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms