RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
PKNOX1-209ENST00000560448 CHPF2Q9P2E5 772 aa17.99■□□□□ 0.47
PKNOX1-209ENST00000560448 CACNA1FO60840 1977 aa17.99■□□□□ 0.47
PKNOX1-209ENST00000560448 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 ELL2O00472 640 aaPredicted RBP17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 CT47B1P0C2W7 299 aaPredicted RBP17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 NFIXQ14938 502 aa17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 TSPYL6Q8N831 410 aa17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 SETDB2Q96T68 719 aa17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
PKNOX1-209ENST00000560448 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
PKNOX1-209ENST00000560448 HNRNPUQ00839 825 aaKnown RBP eCLIP17.97■□□□□ 0.47
PKNOX1-209ENST00000560448 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
PKNOX1-209ENST00000560448 GIGYF2Q6Y7W6 1299 aaKnown RBP17.97■□□□□ 0.47
PKNOX1-209ENST00000560448 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
PKNOX1-209ENST00000560448 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
PKNOX1-209ENST00000560448 NRXN2Q9P2S2 1712 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 KIF13BQ9NQT8 1826 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 VAMP4O75379 141 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 PROSER3Q2NL68 480 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 COPS6Q7L5N1 327 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 NECTIN2Q92692 538 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 SYT17Q9BSW7 474 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
PKNOX1-209ENST00000560448 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
PKNOX1-209ENST00000560448 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
PKNOX1-209ENST00000560448 TBC1D9BQ66K14 1250 aa17.95■□□□□ 0.46
PKNOX1-209ENST00000560448 PLBD2Q8NHP8 589 aa17.95■□□□□ 0.46
PKNOX1-209ENST00000560448 NUP98P52948 1817 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 SERPINB2P05120 415 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 TGFB2P61812 414 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 DDR1Q08345 913 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 TTLL7Q6ZT98 887 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 PDZRN3Q9UPQ7 1066 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
PKNOX1-209ENST00000560448 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
PKNOX1-209ENST00000560448 NYXQ9GZU5 481 aa17.93■□□□□ 0.46
PKNOX1-209ENST00000560448 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
PKNOX1-209ENST00000560448 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
PKNOX1-209ENST00000560448 ANXA1P04083 346 aa17.92■□□□□ 0.46
PKNOX1-209ENST00000560448 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
PKNOX1-209ENST00000560448 ZBTB3Q9H5J0 574 aa17.92■□□□□ 0.46
PKNOX1-209ENST00000560448 AIMP1Q12904 312 aaKnown RBP17.91■□□□□ 0.46
PKNOX1-209ENST00000560448 HLFQ16534 295 aa17.91■□□□□ 0.46
PKNOX1-209ENST00000560448 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 ST5P78524 1137 aa17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 ZNF34Q8IZ26 560 aa17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 CNBD1Q8NA66 436 aa17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
PKNOX1-209ENST00000560448 NPHP1O15259 732 aa17.89■□□□□ 0.46
PKNOX1-209ENST00000560448 TCIRG1Q13488 830 aa17.89■□□□□ 0.46
PKNOX1-209ENST00000560448 PPP1R42Q7Z4L9 355 aa17.89■□□□□ 0.46
PKNOX1-209ENST00000560448 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.46
PKNOX1-209ENST00000560448 KLHL34Q8N239 644 aa17.89■□□□□ 0.46
PKNOX1-209ENST00000560448 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.46
PKNOX1-209ENST00000560448 ANKRD36CQ5JPF3 1778 aa17.89■□□□□ 0.45
PKNOX1-209ENST00000560448 ALDH1L2Q3SY69 923 aa17.89■□□□□ 0.45
PKNOX1-209ENST00000560448 RIC3Q7Z5B4 369 aa17.89■□□□□ 0.45
PKNOX1-209ENST00000560448 BRIP1Q9BX63 1249 aa17.89■□□□□ 0.45
PKNOX1-209ENST00000560448 RIC1Q4ADV7 1423 aa17.88■□□□□ 0.45
PKNOX1-209ENST00000560448 PDE6BP35913 854 aa17.88■□□□□ 0.45
PKNOX1-209ENST00000560448 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
PKNOX1-209ENST00000560448 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
PKNOX1-209ENST00000560448 PHAXQ9H814 394 aaKnown RBP17.88■□□□□ 0.45
PKNOX1-209ENST00000560448 FLIIQ13045 1269 aa17.87■□□□□ 0.45
PKNOX1-209ENST00000560448 PRR5LQ6MZQ0 368 aa17.87■□□□□ 0.45
PKNOX1-209ENST00000560448 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
PKNOX1-209ENST00000560448 PXDNLA1KZ92 1463 aa17.85■□□□□ 0.45
PKNOX1-209ENST00000560448 GTF2E1P29083 439 aaPredicted RBP17.85■□□□□ 0.45
PKNOX1-209ENST00000560448 NEXNQ0ZGT2 675 aa17.85■□□□□ 0.45
PKNOX1-209ENST00000560448 UBN2Q6ZU65 1347 aa17.85■□□□□ 0.45
PKNOX1-209ENST00000560448 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
PKNOX1-209ENST00000560448 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
PKNOX1-209ENST00000560448 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
PKNOX1-209ENST00000560448 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
PKNOX1-209ENST00000560448 PTPRCP08575 1304 aa17.84■□□□□ 0.45
PKNOX1-209ENST00000560448 PI4KAP2A4QPH2 592 aa17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 FKBP5Q13451 457 aaPredicted RBP17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 NLRP10Q86W26 655 aa17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 PI4KAP1Q8N8J0 262 aa17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 CCDC191Q8NCU4 936 aa17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 NLGN2Q8NFZ4 835 aa17.83■□□□□ 0.45
PKNOX1-209ENST00000560448 KIAA1551Q9HCM1 1747 aa17.83■□□□□ 0.44
PKNOX1-209ENST00000560448 H0YIN7 160 aa17.82■□□□□ 0.44
PKNOX1-209ENST00000560448 NTSR2O95665 410 aa17.82■□□□□ 0.44
PKNOX1-209ENST00000560448 GPTP24298 496 aa17.82■□□□□ 0.44
PKNOX1-209ENST00000560448 MAP3K2Q9Y2U5 619 aa17.82■□□□□ 0.44
PKNOX1-209ENST00000560448 DLEC1Q9Y238 1755 aa17.82■□□□□ 0.44
PKNOX1-209ENST00000560448 KLRG2A4D1S0 409 aaPredicted RBP17.81■□□□□ 0.44
PKNOX1-209ENST00000560448 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
PKNOX1-209ENST00000560448 PIM2Q9P1W9 311 aa17.81■□□□□ 0.44
PKNOX1-209ENST00000560448 SH3TC1Q8TE82 1336 aa17.81■□□□□ 0.44
PKNOX1-209ENST00000560448 ADCY9O60503 1353 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms