RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 RGL2O15211 777 aa30.5■■■□□ 2.47
CRNDE-209ENST00000560208 LMOD3Q0VAK6 560 aa30.5■■■□□ 2.47
CRNDE-209ENST00000560208 ST5P78524 1137 aa30.49■■■□□ 2.47
CRNDE-209ENST00000560208 ZNF622Q969S3 477 aaKnown RBP eCLIP30.49■■■□□ 2.47
CRNDE-209ENST00000560208 RNF181Q9P0P0 153 aa30.49■■■□□ 2.47
CRNDE-209ENST00000560208 RRP7AQ9Y3A4 280 aaKnown RBP30.49■■■□□ 2.47
CRNDE-209ENST00000560208 COL11A2P13942 1736 aaPredicted RBP30.48■■■□□ 2.47
CRNDE-209ENST00000560208 NBPF5PQ86XG9 351 aaPredicted RBP30.48■■■□□ 2.47
CRNDE-209ENST00000560208 NGEFQ8N5V2 710 aa30.48■■■□□ 2.47
CRNDE-209ENST00000560208 NEUROD2Q15784 382 aa30.47■■■□□ 2.47
CRNDE-209ENST00000560208 HLFQ16534 295 aa30.47■■■□□ 2.47
CRNDE-209ENST00000560208 CCDC184Q52MB2 194 aa30.47■■■□□ 2.47
CRNDE-209ENST00000560208 RUNDC1Q96C34 613 aa30.47■■■□□ 2.47
CRNDE-209ENST00000560208 NIP7Q9Y221 180 aaKnown RBP eCLIP30.47■■■□□ 2.47
CRNDE-209ENST00000560208 KIF3CO14782 793 aa30.46■■■□□ 2.47
CRNDE-209ENST00000560208 BABAM1Q9NWV8 329 aa30.46■■■□□ 2.47
CRNDE-209ENST00000560208 ADAMTS8Q9UP79 889 aa30.46■■■□□ 2.47
CRNDE-209ENST00000560208 RASSF7Q02833 373 aa30.45■■■□□ 2.47
CRNDE-209ENST00000560208 NUP98P52948 1817 aa30.45■■■□□ 2.46
CRNDE-209ENST00000560208 CCDC88AQ3V6T2 1871 aa30.44■■■□□ 2.46
CRNDE-209ENST00000560208 MYL6BP14649 208 aa30.44■■■□□ 2.46
CRNDE-209ENST00000560208 TPTE2Q6XPS3 522 aa30.43■■■□□ 2.46
CRNDE-209ENST00000560208 CACNA1SQ13698 1873 aa30.42■■■□□ 2.46
CRNDE-209ENST00000560208 ERVV-1B6SEH8 477 aa30.41■■■□□ 2.46
CRNDE-209ENST00000560208 SRGNP10124 158 aa30.41■■■□□ 2.46
CRNDE-209ENST00000560208 STYK1Q6J9G0 422 aa30.41■■■□□ 2.46
CRNDE-209ENST00000560208 TTLL7Q6ZT98 887 aa30.41■■■□□ 2.46
CRNDE-209ENST00000560208 MAP3K15Q6ZN16 1313 aa30.41■■■□□ 2.46
CRNDE-209ENST00000560208 FAM177BA6PVY3 158 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 LMNB1P20700 586 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 KIF6Q6ZMV9 814 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 CNKSR1Q969H4 720 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 MRS2Q9HD23 443 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 NMRK2Q9NPI5 230 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 ZNF219Q9P2Y4 722 aaPredicted RBP30.4■■■□□ 2.46
CRNDE-209ENST00000560208 ERBB4Q15303 1308 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 SLX4Q8IY92 1834 aa30.4■■■□□ 2.46
CRNDE-209ENST00000560208 C21orf2O43822 256 aa30.39■■■□□ 2.46
CRNDE-209ENST00000560208 MASTLQ96GX5 879 aa30.39■■■□□ 2.46
CRNDE-209ENST00000560208 TRIM35Q9UPQ4 493 aa30.39■■■□□ 2.46
CRNDE-209ENST00000560208 CEP350Q5VT06 3117 aa30.38■■■□□ 2.45
CRNDE-209ENST00000560208 NFKBIEO00221 500 aa30.38■■■□□ 2.45
CRNDE-209ENST00000560208 EIF2S2P20042 333 aaKnown RBP30.38■■■□□ 2.45
CRNDE-209ENST00000560208 PRELPP51888 382 aa30.38■■■□□ 2.45
CRNDE-209ENST00000560208 FER1L6Q2WGJ9 1857 aa30.36■■■□□ 2.45
CRNDE-209ENST00000560208 CHL1O00533 1208 aa30.36■■■□□ 2.45
CRNDE-209ENST00000560208 ZBTB3Q9H5J0 574 aa30.36■■■□□ 2.45
CRNDE-209ENST00000560208 KDM2BQ8NHM5 1336 aa30.36■■■□□ 2.45
CRNDE-209ENST00000560208 ARFGEF2Q9Y6D5 1785 aa30.36■■■□□ 2.45
CRNDE-209ENST00000560208 GTF2E1P29083 439 aaPredicted RBP30.35■■■□□ 2.45
CRNDE-209ENST00000560208 PRPF40BQ6NWY9 871 aaKnown RBP30.35■■■□□ 2.45
CRNDE-209ENST00000560208 ZC3H4Q9UPT8 1303 aaKnown RBP30.34■■■□□ 2.45
CRNDE-209ENST00000560208 KLRG2A4D1S0 409 aaPredicted RBP30.34■■■□□ 2.45
CRNDE-209ENST00000560208 PDIA6Q15084 440 aa30.34■■■□□ 2.45
CRNDE-209ENST00000560208 LAS1LQ9Y4W2 734 aaKnown RBP30.34■■■□□ 2.45
CRNDE-209ENST00000560208 NPR1P16066 1061 aa30.33■■■□□ 2.45
CRNDE-209ENST00000560208 NYXQ9GZU5 481 aa30.33■■■□□ 2.45
CRNDE-209ENST00000560208 TOMM70O94826 608 aa30.32■■■□□ 2.44
CRNDE-209ENST00000560208 GPTP24298 496 aa30.31■■■□□ 2.44
CRNDE-209ENST00000560208 LRP10Q7Z4F1 713 aa30.31■■■□□ 2.44
CRNDE-209ENST00000560208 DICER1Q9UPY3 1922 aaKnown RBP30.3■■■□□ 2.44
CRNDE-209ENST00000560208 ANXA1P04083 346 aa30.3■■■□□ 2.44
CRNDE-209ENST00000560208 HSPA6P17066 643 aa30.3■■■□□ 2.44
CRNDE-209ENST00000560208 PROSER3Q2NL68 480 aa30.3■■■□□ 2.44
CRNDE-209ENST00000560208 GIGYF2Q6Y7W6 1299 aaKnown RBP30.3■■■□□ 2.44
CRNDE-209ENST00000560208 NECTIN2Q92692 538 aa30.3■■■□□ 2.44
CRNDE-209ENST00000560208 TIAM2Q8IVF5 1701 aa30.3■■■□□ 2.44
CRNDE-209ENST00000560208 KRT24Q2M2I5 525 aa30.29■■■□□ 2.44
CRNDE-209ENST00000560208 SOGA3Q5TF21 947 aa30.29■■■□□ 2.44
CRNDE-209ENST00000560208 NUTM1Q86Y26 1132 aa30.29■■■□□ 2.44
CRNDE-209ENST00000560208 RRAGCQ9HB90 399 aa30.29■■■□□ 2.44
CRNDE-209ENST00000560208 UBN2Q6ZU65 1347 aa30.28■■■□□ 2.44
CRNDE-209ENST00000560208 TNRC6CQ9HCJ0 1690 aaKnown RBP30.28■■■□□ 2.44
CRNDE-209ENST00000560208 DIEXFQ68CQ4 756 aaKnown RBP30.28■■■□□ 2.44
CRNDE-209ENST00000560208 ZNF34Q8IZ26 560 aa30.28■■■□□ 2.44
CRNDE-209ENST00000560208 LTBP3Q9NS15 1303 aa30.27■■■□□ 2.44
CRNDE-209ENST00000560208 APAF1O14727 1248 aa30.27■■■□□ 2.44
CRNDE-209ENST00000560208 ERFEQ4G0M1 354 aa30.27■■■□□ 2.44
CRNDE-209ENST00000560208 C16orf71Q8IYS4 520 aaPredicted RBP30.27■■■□□ 2.44
CRNDE-209ENST00000560208 C7orf43Q8WVR3 580 aa30.27■■■□□ 2.44
CRNDE-209ENST00000560208 TAOK3Q9H2K8 898 aa30.27■■■□□ 2.44
CRNDE-209ENST00000560208 SUSD4Q5VX71 490 aa30.26■■■□□ 2.43
CRNDE-209ENST00000560208 ABCC12Q96J65 1359 aa30.26■■■□□ 2.43
CRNDE-209ENST00000560208 GLTPD2A6NH11 291 aa30.25■■■□□ 2.43
CRNDE-209ENST00000560208 CFAP44Q96MT7 982 aa30.25■■■□□ 2.43
CRNDE-209ENST00000560208 IBTKQ9P2D0 1353 aaPredicted RBP30.25■■■□□ 2.43
CRNDE-209ENST00000560208 ALDH1B1P30837 517 aa30.23■■■□□ 2.43
CRNDE-209ENST00000560208 COPS6Q7L5N1 327 aa30.23■■■□□ 2.43
CRNDE-209ENST00000560208 DDX21Q9NR30 783 aaKnown RBP eCLIP30.23■■■□□ 2.43
CRNDE-209ENST00000560208 AIMP1Q12904 312 aaKnown RBP30.22■■■□□ 2.43
CRNDE-209ENST00000560208 CRY2Q49AN0 593 aa30.22■■■□□ 2.43
CRNDE-209ENST00000560208 PARP10Q53GL7 1025 aa30.22■■■□□ 2.43
CRNDE-209ENST00000560208 CCDC93Q567U6 631 aa30.22■■■□□ 2.43
CRNDE-209ENST00000560208 PPP1R42Q7Z4L9 355 aa30.22■■■□□ 2.43
CRNDE-209ENST00000560208 RBM46Q8TBY0 533 aaKnown RBP30.22■■■□□ 2.43
CRNDE-209ENST00000560208 XAGE3Q8WTP9 111 aa30.22■■■□□ 2.43
CRNDE-209ENST00000560208 NTSR2O95665 410 aa30.21■■■□□ 2.43
CRNDE-209ENST00000560208 HOXB7P09629 217 aa30.2■■■□□ 2.43
CRNDE-209ENST00000560208 FAM9BQ8IZU0 186 aa30.2■■■□□ 2.43
CRNDE-209ENST00000560208 MBIPQ9NS73 344 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms