RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
SMAD3-213ENST00000560175 MAP3K15Q6ZN16 1313 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 GNAI1P63096 354 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 HLFQ16534 295 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 TTLL7Q6ZT98 887 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 MBIPQ9NS73 344 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 PDZRN3Q9UPQ7 1066 aa17.24■□□□□ 0.35
SMAD3-213ENST00000560175 CHRNA5P30532 468 aa17.23■□□□□ 0.35
SMAD3-213ENST00000560175 MYL6BP14649 208 aa17.22■□□□□ 0.35
SMAD3-213ENST00000560175 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
SMAD3-213ENST00000560175 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
SMAD3-213ENST00000560175 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMAD3-213ENST00000560175 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
SMAD3-213ENST00000560175 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
SMAD3-213ENST00000560175 KLRG2A4D1S0 409 aaPredicted RBP17.21■□□□□ 0.35
SMAD3-213ENST00000560175 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
SMAD3-213ENST00000560175 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
SMAD3-213ENST00000560175 PDE6BP35913 854 aa17.2■□□□□ 0.34
SMAD3-213ENST00000560175 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
SMAD3-213ENST00000560175 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
SMAD3-213ENST00000560175 ZNF34Q8IZ26 560 aa17.2■□□□□ 0.34
SMAD3-213ENST00000560175 ZNF784Q8NCA9 323 aaPredicted RBP17.2■□□□□ 0.34
SMAD3-213ENST00000560175 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMAD3-213ENST00000560175 IL16Q14005 1332 aa17.2■□□□□ 0.34
SMAD3-213ENST00000560175 H0YIN7 160 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
SMAD3-213ENST00000560175 ADCY9O60503 1353 aa17.18■□□□□ 0.34
SMAD3-213ENST00000560175 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
SMAD3-213ENST00000560175 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-213ENST00000560175 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-213ENST00000560175 SBF1O95248 1867 aa17.17■□□□□ 0.34
SMAD3-213ENST00000560175 ANXA1P04083 346 aa17.17■□□□□ 0.34
SMAD3-213ENST00000560175 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
SMAD3-213ENST00000560175 NBPF5PQ86XG9 351 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-213ENST00000560175 TTLL6Q8N841 843 aa17.17■□□□□ 0.34
SMAD3-213ENST00000560175 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-213ENST00000560175 SRGNP10124 158 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 ST5P78524 1137 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 HDGFL1Q5TGJ6 251 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 ZBTB3Q9H5J0 574 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
SMAD3-213ENST00000560175 ANKRD36CQ5JPF3 1778 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 ARFGEF2Q9Y6D5 1785 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 CCDC24Q8N4L8 307 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 NYXQ9GZU5 481 aa17.15■□□□□ 0.34
SMAD3-213ENST00000560175 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
SMAD3-213ENST00000560175 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
SMAD3-213ENST00000560175 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
SMAD3-213ENST00000560175 SLX4Q8IY92 1834 aa17.13■□□□□ 0.33
SMAD3-213ENST00000560175 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
SMAD3-213ENST00000560175 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
SMAD3-213ENST00000560175 MASTLQ96GX5 879 aa17.13■□□□□ 0.33
SMAD3-213ENST00000560175 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
SMAD3-213ENST00000560175 NTSR2O95665 410 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 HSP90AB3PQ58FF7 597 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
SMAD3-213ENST00000560175 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
SMAD3-213ENST00000560175 C7orf43Q8WVR3 580 aa17.11■□□□□ 0.33
SMAD3-213ENST00000560175 CNKSR1Q969H4 720 aa17.11■□□□□ 0.33
SMAD3-213ENST00000560175 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
SMAD3-213ENST00000560175 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
SMAD3-213ENST00000560175 NPR1P16066 1061 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 GPTP24298 496 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
SMAD3-213ENST00000560175 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
SMAD3-213ENST00000560175 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 PPP1R42Q7Z4L9 355 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 TSR2Q969E8 191 aaKnown RBP17.1■□□□□ 0.33
SMAD3-213ENST00000560175 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMAD3-213ENST00000560175 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
SMAD3-213ENST00000560175 SENP3-EIF4A1A0A087X0R7 540 aa17.09■□□□□ 0.33
SMAD3-213ENST00000560175 NPHP1O15259 732 aa17.09■□□□□ 0.33
SMAD3-213ENST00000560175 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
SMAD3-213ENST00000560175 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
SMAD3-213ENST00000560175 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
SMAD3-213ENST00000560175 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
SMAD3-213ENST00000560175 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
SMAD3-213ENST00000560175 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms