RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 TMF1P82094 1093 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 MPNDQ8N594 471 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 PUS7Q96PZ0 661 aaKnown RBP8.57□□□□□ -1.04
CLPX-206ENST00000560166 PURBQ96QR8 312 aaKnown RBP8.57□□□□□ -1.04
CLPX-206ENST00000560166 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
CLPX-206ENST00000560166 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
CLPX-206ENST00000560166 KIF7Q2M1P5 1343 aa8.56□□□□□ -1.04
CLPX-206ENST00000560166 ADAMTS13Q76LX8 1427 aa8.56□□□□□ -1.04
CLPX-206ENST00000560166 YTHDC2Q9H6S0 1430 aaKnown RBP8.56□□□□□ -1.04
CLPX-206ENST00000560166 IGHA1P01876 353 aa8.56□□□□□ -1.04
CLPX-206ENST00000560166 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
CLPX-206ENST00000560166 TBX22Q9Y458 520 aa8.56□□□□□ -1.04
CLPX-206ENST00000560166 CENPJQ9HC77 1338 aaPredicted RBP8.55□□□□□ -1.04
CLPX-206ENST00000560166 NRXN3Q9Y4C0 1643 aa8.55□□□□□ -1.04
CLPX-206ENST00000560166 MYO5BQ9ULV0 1848 aa8.55□□□□□ -1.04
CLPX-206ENST00000560166 USP46P62068 366 aa8.55□□□□□ -1.04
CLPX-206ENST00000560166 NGLY1Q96IV0 654 aa8.55□□□□□ -1.04
CLPX-206ENST00000560166 SHPRHQ149N8 1683 aa8.55□□□□□ -1.04
CLPX-206ENST00000560166 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
CLPX-206ENST00000560166 ATF3P18847 181 aa8.54□□□□□ -1.04
CLPX-206ENST00000560166 MCM6Q14566 821 aa8.54□□□□□ -1.04
CLPX-206ENST00000560166 XP32Q5T750 250 aa8.54□□□□□ -1.04
CLPX-206ENST00000560166 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
CLPX-206ENST00000560166 TIMP2P16035 220 aa8.53□□□□□ -1.04
CLPX-206ENST00000560166 HLA-CQ95604 372 aa8.53□□□□□ -1.04
CLPX-206ENST00000560166 HIRIP3Q9BW71 556 aaPredicted RBP8.53□□□□□ -1.04
CLPX-206ENST00000560166 KLF16Q9BXK1 252 aaPredicted RBP8.53□□□□□ -1.04
CLPX-206ENST00000560166 SRCAPQ6ZRS2 3230 aa8.53□□□□□ -1.04
CLPX-206ENST00000560166 PTCH1Q13635 1447 aa8.53□□□□□ -1.04
CLPX-206ENST00000560166 NWD1Q149M9 1564 aa8.52□□□□□ -1.04
CLPX-206ENST00000560166 METP08581 1390 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 NINLQ9Y2I6 1382 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
CLPX-206ENST00000560166 A6NJR5 290 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 ADAMTS2O95450 1211 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 NNTQ13423 1086 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 TMEM132EQ6IEE7 984 aa8.52□□□□□ -1.05
CLPX-206ENST00000560166 DNMT3AQ9Y6K1 912 aaPredicted RBP8.52□□□□□ -1.05
CLPX-206ENST00000560166 KNDC1Q76NI1 1749 aa8.51□□□□□ -1.05
CLPX-206ENST00000560166 KRT76Q01546 638 aa8.51□□□□□ -1.05
CLPX-206ENST00000560166 DDX10Q13206 875 aaKnown RBP8.51□□□□□ -1.05
CLPX-206ENST00000560166 TRAK1Q9UPV9 953 aa8.51□□□□□ -1.05
CLPX-206ENST00000560166 ARHGEF28Q8N1W1 1705 aaKnown RBP8.51□□□□□ -1.05
CLPX-206ENST00000560166 EVC2Q86UK5 1308 aa8.51□□□□□ -1.05
CLPX-206ENST00000560166 KTN1Q86UP2 1357 aaKnown RBP8.5□□□□□ -1.05
CLPX-206ENST00000560166 TRAK2O60296 914 aa8.5□□□□□ -1.05
CLPX-206ENST00000560166 ADH1CP00326 375 aa8.5□□□□□ -1.05
CLPX-206ENST00000560166 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
CLPX-206ENST00000560166 BRINP3Q76B58 766 aa8.5□□□□□ -1.05
CLPX-206ENST00000560166 TLL2Q9Y6L7 1015 aa8.5□□□□□ -1.05
CLPX-206ENST00000560166 HOXA2O43364 376 aa8.49□□□□□ -1.05
CLPX-206ENST00000560166 MAN1A2O60476 641 aa8.49□□□□□ -1.05
CLPX-206ENST00000560166 VARSP26640 1264 aaKnown RBP8.49□□□□□ -1.05
CLPX-206ENST00000560166 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
CLPX-206ENST00000560166 WDR4P57081 412 aaKnown RBP8.49□□□□□ -1.05
CLPX-206ENST00000560166 TBC1D2Q9BYX2 928 aa8.49□□□□□ -1.05
CLPX-206ENST00000560166 USP21Q9UK80 565 aa8.49□□□□□ -1.05
CLPX-206ENST00000560166 FOXK2Q01167 660 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 CCDC125Q86Z20 511 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 GPR161Q8N6U8 529 aaKnown RBP8.48□□□□□ -1.05
CLPX-206ENST00000560166 SYMPKQ92797 1274 aaKnown RBP8.48□□□□□ -1.05
CLPX-206ENST00000560166 LRRC59Q96AG4 307 aaKnown RBP8.48□□□□□ -1.05
CLPX-206ENST00000560166 PRAM1Q96QH2 718 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLPX-206ENST00000560166 C19orf44Q9H6X5 657 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 POGKQ9P215 609 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
CLPX-206ENST00000560166 QRICH2Q9H0J4 1663 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 TULP4Q9NRJ4 1543 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 ADGRB2O60241 1585 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 NPC1L1Q9UHC9 1359 aa8.48□□□□□ -1.05
CLPX-206ENST00000560166 XRN1Q8IZH2 1706 aaKnown RBP8.47□□□□□ -1.05
CLPX-206ENST00000560166 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.47□□□□□ -1.05
CLPX-206ENST00000560166 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
CLPX-206ENST00000560166 DDX17Q92841 729 aaKnown RBP8.47□□□□□ -1.05
CLPX-206ENST00000560166 POM121Q96HA1 1249 aa8.47□□□□□ -1.05
CLPX-206ENST00000560166 STK26Q9P289 416 aa8.47□□□□□ -1.05
CLPX-206ENST00000560166 ROBO2Q9HCK4 1378 aa8.47□□□□□ -1.05
CLPX-206ENST00000560166 PTPRUQ92729 1446 aa8.46□□□□□ -1.05
CLPX-206ENST00000560166 CCER2I3L3R5 266 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 ANP32CO43423 234 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.06
CLPX-206ENST00000560166 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 PNPLA6Q8IY17 1366 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.06
CLPX-206ENST00000560166 RAD21O60216 631 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 CCNYL3P0C7X3 344 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 ZNF385CQ66K41 422 aaPredicted RBP8.45□□□□□ -1.06
CLPX-206ENST00000560166 DEFB132Q7Z7B7 95 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 BAP1Q92560 729 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 AMOTL2Q9Y2J4 779 aa8.45□□□□□ -1.06
CLPX-206ENST00000560166 PER1O15534 1290 aaPredicted RBP8.44□□□□□ -1.06
CLPX-206ENST00000560166 YY1P25490 414 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms