RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 C1orf216Q8TAB5 229 aa6.81□□□□□ -1.32
CASC4-210ENST00000559550 ESF1Q9H501 851 aaKnown RBP6.81□□□□□ -1.32
CASC4-210ENST00000559550 ETNK1Q9HBU6 452 aa6.81□□□□□ -1.32
CASC4-210ENST00000559550 USP17L5A8MUK1 530 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 GRIK4Q16099 956 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 MAP7D1Q3KQU3 841 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 ESCO1Q5FWF5 840 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 MCTP1Q6DN14 999 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 PRDM6Q9NQX0 595 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 STRN4Q9NRL3 753 aa6.8□□□□□ -1.32
CASC4-210ENST00000559550 TFIP11Q9UBB9 837 aaKnown RBP6.8□□□□□ -1.32
CASC4-210ENST00000559550 A0A1W2PNR3 127 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 PALM3A6NDB9 673 aaPredicted RBP6.79□□□□□ -1.32
CASC4-210ENST00000559550 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
CASC4-210ENST00000559550 FAM157BP0CG42 384 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 NCOA4Q13772 614 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 ZNF295-AS1Q8N0V1 137 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 NACC1Q96RE7 527 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 PPP1R12CQ9BZL4 782 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 STARD13Q9Y3M8 1113 aa6.79□□□□□ -1.32
CASC4-210ENST00000559550 USP17L3A6NCW0 530 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 USP17L4A6NCW7 530 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 ATP9BO43861 1147 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 COBLO75128 1261 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 ADGRE1Q14246 886 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 TLR1Q15399 786 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 USP17L2Q6R6M4 530 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 USP17L1Q7RTZ2 530 aa6.78□□□□□ -1.32
CASC4-210ENST00000559550 MAFBQ9Y5Q3 323 aaPredicted RBP6.78□□□□□ -1.32
CASC4-210ENST00000559550 SUPT5HO00267 1087 aaKnown RBP6.77□□□□□ -1.33
CASC4-210ENST00000559550 EFSO43281 561 aa6.77□□□□□ -1.33
CASC4-210ENST00000559550 MYCP01106 439 aaPredicted RBP6.77□□□□□ -1.33
CASC4-210ENST00000559550 NID1P14543 1247 aa6.77□□□□□ -1.33
CASC4-210ENST00000559550 USP4Q13107 963 aa6.77□□□□□ -1.33
CASC4-210ENST00000559550 CFAP70Q5T0N1 1121 aa6.77□□□□□ -1.33
CASC4-210ENST00000559550 ERICH6Q7L0X2 663 aa6.77□□□□□ -1.33
CASC4-210ENST00000559550 ADARB2-AS1A8MUL3 147 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 M0R082 166 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 TRIM28Q13263 835 aaKnown RBP6.76□□□□□ -1.33
CASC4-210ENST00000559550 MBTPS1Q14703 1052 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 PLEKHM2Q8IWE5 1019 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
CASC4-210ENST00000559550 KRTAP4-11Q9BYQ6 195 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 PRR12Q9ULL5 1215 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 PCDHGA11Q9Y5H2 935 aa6.76□□□□□ -1.33
CASC4-210ENST00000559550 ALBP02768 609 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 SELPP16109 830 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 ALAS2P22557 587 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
CASC4-210ENST00000559550 EML3Q32P44 896 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 SAMD5Q5TGI4 173 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 SYT9Q86SS6 491 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 ZIC5Q96T25 663 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 MARK1Q9P0L2 795 aa6.75□□□□□ -1.33
CASC4-210ENST00000559550 COL17A1Q9UMD9 1497 aaPredicted RBP6.74□□□□□ -1.33
CASC4-210ENST00000559550 C9orf172C9J069 976 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 SCNN1DP51172 638 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 LAMC2Q13753 1193 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 CCDC82Q8N4S0 544 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 FMNL2Q96PY5 1086 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
CASC4-210ENST00000559550 NIFKQ9BYG3 293 aaKnown RBP6.74□□□□□ -1.33
CASC4-210ENST00000559550 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 NOD1Q9Y239 953 aa6.74□□□□□ -1.33
CASC4-210ENST00000559550 LZTS3O60299 673 aaPredicted RBP6.73□□□□□ -1.33
CASC4-210ENST00000559550 SIN3BO75182 1162 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 GTF2IP78347 998 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 CLDN10P78369 228 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 KANK4Q5T7N3 995 aaPredicted RBP6.73□□□□□ -1.33
CASC4-210ENST00000559550 TXNRD3Q86VQ6 643 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 TNFRSF25Q93038 417 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 AIDAQ96BJ3 306 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 SIRT1Q96EB6 747 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 KIAA1024Q9UPX6 916 aa6.73□□□□□ -1.33
CASC4-210ENST00000559550 ZBTB7BO15156 539 aaPredicted RBP6.72□□□□□ -1.33
CASC4-210ENST00000559550 RFX1P22670 979 aa6.72□□□□□ -1.33
CASC4-210ENST00000559550 ARSJQ5FYB0 599 aaPredicted RBP6.72□□□□□ -1.33
CASC4-210ENST00000559550 C20orf204Q6ZNR8 217 aa6.72□□□□□ -1.33
CASC4-210ENST00000559550 ZDHHC3Q9NYG2 299 aa6.72□□□□□ -1.33
CASC4-210ENST00000559550 MKRN1Q9UHC7 482 aaKnown RBP6.72□□□□□ -1.33
CASC4-210ENST00000559550 INHAP05111 366 aa6.71□□□□□ -1.34
CASC4-210ENST00000559550 CCDC97Q96F63 343 aaPredicted RBP6.71□□□□□ -1.34
CASC4-210ENST00000559550 RNF112Q9ULX5 631 aa6.71□□□□□ -1.34
CASC4-210ENST00000559550 IQSEC3Q9UPP2 1182 aaPredicted RBP6.71□□□□□ -1.34
CASC4-210ENST00000559550 TMEM229AB2RXF0 380 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 ELNP15502 786 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 GDF10P55107 478 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 SRPK2P78362 688 aaKnown RBP6.7□□□□□ -1.34
CASC4-210ENST00000559550 CDCA8Q53HL2 280 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 OGFOD1Q8N543 542 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 TP53INP1Q96A56 240 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 LENG1Q96BZ8 264 aaPredicted RBP6.7□□□□□ -1.34
CASC4-210ENST00000559550 SERPINA10Q9UK55 444 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
CASC4-210ENST00000559550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.69□□□□□ -1.34
CASC4-210ENST00000559550 DKK1O94907 266 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms