RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 APAF1O14727 1248 aa16.46■□□□□ 0.23
LRRC28-214ENST00000559433 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
LRRC28-214ENST00000559433 CHL1O00533 1208 aa16.45■□□□□ 0.22
LRRC28-214ENST00000559433 MYL6BP14649 208 aa16.45■□□□□ 0.22
LRRC28-214ENST00000559433 CLEC4GQ6UXB4 293 aa16.45■□□□□ 0.22
LRRC28-214ENST00000559433 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
LRRC28-214ENST00000559433 H0YIN7 160 aa16.44■□□□□ 0.22
LRRC28-214ENST00000559433 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
LRRC28-214ENST00000559433 KIF6Q6ZMV9 814 aa16.44■□□□□ 0.22
LRRC28-214ENST00000559433 CNBD1Q8NA66 436 aa16.44■□□□□ 0.22
LRRC28-214ENST00000559433 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
LRRC28-214ENST00000559433 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
LRRC28-214ENST00000559433 RGL2O15211 777 aa16.43■□□□□ 0.22
LRRC28-214ENST00000559433 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
LRRC28-214ENST00000559433 C2CD5Q86YS7 1000 aa16.43■□□□□ 0.22
LRRC28-214ENST00000559433 CCDC24Q8N4L8 307 aa16.43■□□□□ 0.22
LRRC28-214ENST00000559433 PDE6BP35913 854 aa16.42■□□□□ 0.22
LRRC28-214ENST00000559433 ST5P78524 1137 aa16.42■□□□□ 0.22
LRRC28-214ENST00000559433 NBPF5PQ86XG9 351 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-214ENST00000559433 GPBP1L1Q9HC44 474 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-214ENST00000559433 PDZRN3Q9UPQ7 1066 aa16.42■□□□□ 0.22
LRRC28-214ENST00000559433 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
LRRC28-214ENST00000559433 HLFQ16534 295 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 TTLL7Q6ZT98 887 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 ZNF526Q8TF50 670 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-214ENST00000559433 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 BRIP1Q9BX63 1249 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 ATP10DQ9P241 1426 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 MAP3K15Q6ZN16 1313 aa16.41■□□□□ 0.22
LRRC28-214ENST00000559433 ADCY9O60503 1353 aa16.4■□□□□ 0.22
LRRC28-214ENST00000559433 ERVV-1B6SEH8 477 aa16.4■□□□□ 0.22
LRRC28-214ENST00000559433 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
LRRC28-214ENST00000559433 TTLL6Q8N841 843 aa16.4■□□□□ 0.22
LRRC28-214ENST00000559433 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
LRRC28-214ENST00000559433 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
LRRC28-214ENST00000559433 ARFGEF2Q9Y6D5 1785 aa16.4■□□□□ 0.22
LRRC28-214ENST00000559433 ANKRD36CQ5JPF3 1778 aa16.39■□□□□ 0.21
LRRC28-214ENST00000559433 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
LRRC28-214ENST00000559433 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
LRRC28-214ENST00000559433 MBIPQ9NS73 344 aa16.39■□□□□ 0.21
LRRC28-214ENST00000559433 SBF1O95248 1867 aa16.39■□□□□ 0.21
LRRC28-214ENST00000559433 ANXA1P04083 346 aa16.38■□□□□ 0.21
LRRC28-214ENST00000559433 PDIA6Q15084 440 aa16.38■□□□□ 0.21
LRRC28-214ENST00000559433 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
LRRC28-214ENST00000559433 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
LRRC28-214ENST00000559433 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
LRRC28-214ENST00000559433 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
LRRC28-214ENST00000559433 HOXB7P09629 217 aa16.37■□□□□ 0.21
LRRC28-214ENST00000559433 GNAI1P63096 354 aa16.37■□□□□ 0.21
LRRC28-214ENST00000559433 TNRC6CQ9HCJ0 1690 aaKnown RBP16.37■□□□□ 0.21
LRRC28-214ENST00000559433 CCDC88AQ3V6T2 1871 aa16.36■□□□□ 0.21
LRRC28-214ENST00000559433 ZNF853P0CG23 659 aa16.36■□□□□ 0.21
LRRC28-214ENST00000559433 C1QTNF8P60827 252 aa16.36■□□□□ 0.21
LRRC28-214ENST00000559433 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
LRRC28-214ENST00000559433 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
LRRC28-214ENST00000559433 LRP10Q7Z4F1 713 aa16.36■□□□□ 0.21
LRRC28-214ENST00000559433 GPTP24298 496 aa16.35■□□□□ 0.21
LRRC28-214ENST00000559433 DUSP27Q5VZP5 1158 aa16.35■□□□□ 0.21
LRRC28-214ENST00000559433 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
LRRC28-214ENST00000559433 DDX21Q9NR30 783 aaKnown RBP eCLIP16.35■□□□□ 0.21
LRRC28-214ENST00000559433 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
LRRC28-214ENST00000559433 SLX4Q8IY92 1834 aa16.35■□□□□ 0.21
LRRC28-214ENST00000559433 SRGNP10124 158 aa16.34■□□□□ 0.21
LRRC28-214ENST00000559433 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
LRRC28-214ENST00000559433 STYK1Q6J9G0 422 aa16.34■□□□□ 0.21
LRRC28-214ENST00000559433 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
LRRC28-214ENST00000559433 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
LRRC28-214ENST00000559433 FER1L6Q2WGJ9 1857 aa16.33■□□□□ 0.21
LRRC28-214ENST00000559433 ZBTB22O15209 634 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 COPS6Q7L5N1 327 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 CNKSR1Q969H4 720 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 MASTLQ96GX5 879 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-214ENST00000559433 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-214ENST00000559433 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
LRRC28-214ENST00000559433 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
LRRC28-214ENST00000559433 RASSF7Q02833 373 aa16.32■□□□□ 0.2
LRRC28-214ENST00000559433 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
LRRC28-214ENST00000559433 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
LRRC28-214ENST00000559433 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
LRRC28-214ENST00000559433 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
LRRC28-214ENST00000559433 C21orf2O43822 256 aa16.31■□□□□ 0.2
LRRC28-214ENST00000559433 NPR1P16066 1061 aa16.31■□□□□ 0.2
LRRC28-214ENST00000559433 ERFEQ4G0M1 354 aa16.31■□□□□ 0.2
LRRC28-214ENST00000559433 SUSD4Q5VX71 490 aa16.31■□□□□ 0.2
LRRC28-214ENST00000559433 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
LRRC28-214ENST00000559433 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
LRRC28-214ENST00000559433 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
LRRC28-214ENST00000559433 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
LRRC28-214ENST00000559433 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
LRRC28-214ENST00000559433 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
LRRC28-214ENST00000559433 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
LRRC28-214ENST00000559433 KLRG2A4D1S0 409 aaPredicted RBP16.29■□□□□ 0.2
LRRC28-214ENST00000559433 NTSR2O95665 410 aa16.29■□□□□ 0.2
LRRC28-214ENST00000559433 LMNB1P20700 586 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms