RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 HIRAP54198 1017 aaPredicted RBP8.28□□□□□ -1.08
CASC4-207ENST00000559037 EFHC2Q5JST6 749 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 SLC9A9Q8IVB4 645 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 STAG2Q8N3U4 1231 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 TRERF1Q96PN7 1200 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 NUCKS1Q9H1E3 243 aaKnown RBP8.28□□□□□ -1.08
CASC4-207ENST00000559037 CABP1Q9NZU7 370 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 PTPRGP23470 1445 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 CARMIL2Q6F5E8 1435 aa8.28□□□□□ -1.08
CASC4-207ENST00000559037 MSX1P28360 303 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 DPYDQ12882 1025 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 POTEAQ6S8J7 498 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 TNS4Q8IZW8 715 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 PBXIP1Q96AQ6 731 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 MAPKBP1O60336 1514 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 DISP1Q96F81 1524 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 UGGT2Q9NYU1 1516 aa8.27□□□□□ -1.09
CASC4-207ENST00000559037 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 TSPOAP1O95153 1857 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 TNIKQ9UKE5 1360 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 RFX1P22670 979 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 FIGNL1Q6PIW4 674 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 NLRP8Q86W28 1048 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 TSEN2Q8NCE0 465 aaKnown RBP8.26□□□□□ -1.09
CASC4-207ENST00000559037 PHF24Q9UPV7 400 aa8.26□□□□□ -1.09
CASC4-207ENST00000559037 SERTM1A2A2V5 107 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 ATG7O95352 703 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 ATP4AP20648 1035 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 NOS2P35228 1153 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 DBN1Q16643 649 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 SWI5Q1ZZU3 235 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 FAM200AQ8TCP9 573 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 ARXQ96QS3 562 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 GPAMQ9HCL2 828 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
CASC4-207ENST00000559037 ABCC10Q5T3U5 1492 aa8.25□□□□□ -1.09
CASC4-207ENST00000559037 ARID3CA6NKF2 412 aa8.24□□□□□ -1.09
CASC4-207ENST00000559037 SRPK2P78362 688 aaKnown RBP8.24□□□□□ -1.09
CASC4-207ENST00000559037 L3MBTL2Q969R5 705 aa8.24□□□□□ -1.09
CASC4-207ENST00000559037 CFHR5Q9BXR6 569 aa8.24□□□□□ -1.09
CASC4-207ENST00000559037 TSPAN10Q9H1Z9 355 aaPredicted RBP8.24□□□□□ -1.09
CASC4-207ENST00000559037 NOVA2Q9UNW9 492 aaKnown RBP8.24□□□□□ -1.09
CASC4-207ENST00000559037 USP3Q9Y6I4 520 aa8.24□□□□□ -1.09
CASC4-207ENST00000559037 EML1O00423 815 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
CASC4-207ENST00000559037 IGFBP4P22692 258 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 FAM69CQ0P6D2 419 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 CCDC82Q8N4S0 544 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 GPR161Q8N6U8 529 aaKnown RBP8.23□□□□□ -1.09
CASC4-207ENST00000559037 ZDHHC1Q8WTX9 485 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 AIDAQ96BJ3 306 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 COL25A1Q9BXS0 654 aaPredicted RBP8.23□□□□□ -1.09
CASC4-207ENST00000559037 ZNF232Q9UNY5 417 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 NSFL1CQ9UNZ2 370 aaKnown RBP8.23□□□□□ -1.09
CASC4-207ENST00000559037 UHRF1BP1LA0JNW5 1464 aa8.23□□□□□ -1.09
CASC4-207ENST00000559037 DIP2BQ9P265 1576 aa8.22□□□□□ -1.09
CASC4-207ENST00000559037 KIAA0556O60303 1618 aa8.22□□□□□ -1.09
CASC4-207ENST00000559037 PPP1R12BO60237 982 aaPredicted RBP8.22□□□□□ -1.09
CASC4-207ENST00000559037 RUBCNLQ9H714 662 aa8.22□□□□□ -1.09
CASC4-207ENST00000559037 MBIPQ9NS73 344 aa8.22□□□□□ -1.09
CASC4-207ENST00000559037 ABCC2Q92887 1545 aa8.22□□□□□ -1.09
CASC4-207ENST00000559037 TTBK1Q5TCY1 1321 aaPredicted RBP8.22□□□□□ -1.09
CASC4-207ENST00000559037 ACIN1Q9UKV3 1341 aaKnown RBP8.22□□□□□ -1.09
CASC4-207ENST00000559037 UACAQ9BZF9 1416 aa8.21□□□□□ -1.09
CASC4-207ENST00000559037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.21□□□□□ -1.1
CASC4-207ENST00000559037 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
CASC4-207ENST00000559037 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
CASC4-207ENST00000559037 HIF1AQ16665 826 aa8.21□□□□□ -1.1
CASC4-207ENST00000559037 SAMD5Q5TGI4 173 aa8.21□□□□□ -1.1
CASC4-207ENST00000559037 GTPBP3Q969Y2 492 aaKnown RBP8.21□□□□□ -1.1
CASC4-207ENST00000559037 HINFPQ9BQA5 517 aa8.21□□□□□ -1.1
CASC4-207ENST00000559037 ATXN7L1Q9ULK2 861 aaPredicted RBP8.21□□□□□ -1.1
CASC4-207ENST00000559037 ATAD2Q6PL18 1390 aa8.21□□□□□ -1.1
CASC4-207ENST00000559037 FOXO3O43524 673 aa8.2□□□□□ -1.1
CASC4-207ENST00000559037 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
CASC4-207ENST00000559037 C2orf49Q9BVC5 232 aaPredicted RBP8.2□□□□□ -1.1
CASC4-207ENST00000559037 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
CASC4-207ENST00000559037 KDM5BQ9UGL1 1544 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 A0A1W2PNR3 127 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 C21orf2O43822 256 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 SLURP2P0DP57 97 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 WEE1P30291 646 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 UBAP2LQ14157 1087 aaKnown RBP8.19□□□□□ -1.1
CASC4-207ENST00000559037 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 ZSCAN1Q8NBB4 408 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
CASC4-207ENST00000559037 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 ZIC5Q96T25 663 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 ANKIB1Q9P2G1 1089 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 STK17AQ9UEE5 414 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 PCDHGC4Q9Y5F7 938 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 GOLGA3Q08378 1498 aa8.19□□□□□ -1.1
CASC4-207ENST00000559037 THBS1P07996 1170 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 TXLNAP40222 546 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 KRT76Q01546 638 aa8.18□□□□□ -1.1
CASC4-207ENST00000559037 GAS6Q14393 721 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms