RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 PNPLA7Q6ZV29 1317 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 SMIM5Q71RC9 77 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 AMIGO3Q86WK7 504 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 PLBD2Q8NHP8 589 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 NARFQ9UHQ1 456 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 ZNF652Q9Y2D9 606 aa8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
CHRNA3-204ENST00000559002 USP42Q9H9J4 1324 aaKnown RBP8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 PI4KAP2A4QPH2 592 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 ERVV-1B6SEH8 477 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 CAMTA2O94983 1202 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 MS4A1P11836 297 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 NEXNQ0ZGT2 675 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 R3HDM1Q15032 1099 aaKnown RBP8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 HSP90AB3PQ58FF7 597 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 USPL1Q5W0Q7 1092 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 COL23A1Q86Y22 540 aaPredicted RBP8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 FTSJ3Q8IY81 847 aaKnown RBP8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 PI4KAP1Q8N8J0 262 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 DNAAF4Q8WXU2 420 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 ARHGAP45Q92619 1136 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 SRP68Q9UHB9 627 aaKnown RBP8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 MAP3K2Q9Y2U5 619 aa8.38□□□□□ -1.07
CHRNA3-204ENST00000559002 UBR3Q6ZT12 1888 aa8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 RGL2O15211 777 aa8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 RRP1P56182 461 aaKnown RBP8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 SLC4A10Q6U841 1118 aa8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 ATF7IPQ6VMQ6 1270 aa8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 GIGYF2Q6Y7W6 1299 aaKnown RBP8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 MYD88Q99836 296 aa8.37□□□□□ -1.07
CHRNA3-204ENST00000559002 ADCY9O60503 1353 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 PSDA5PKW4 1024 aaPredicted RBP8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 F6X3S4 739 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 PLIN1O60240 522 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 TRIM27P14373 513 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 HLFQ16534 295 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 CLEC4GQ6UXB4 293 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 METTL22Q9BUU2 404 aaPredicted RBP8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 SCN7AQ01118 1682 aa8.36□□□□□ -1.07
CHRNA3-204ENST00000559002 ABCC4O15439 1325 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 PXDNLA1KZ92 1463 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 GYS1P13807 737 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 GPTP24298 496 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 CCT4P50991 539 aaKnown RBP8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 TCIRG1Q13488 830 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 MSL1Q68DK7 614 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 DZIP1LQ8IYY4 767 aaKnown RBP8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 NLGN1Q8N2Q7 840 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 LINS1Q8NG48 757 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 TNNQ9UQP3 1299 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 SUPT16HQ9Y5B9 1047 aaKnown RBP8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 TUBGCP6Q96RT7 1819 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 ATP10DQ9P241 1426 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
CHRNA3-204ENST00000559002 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 QSER1Q2KHR3 1735 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 NPHP1O15259 732 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 FKBP8Q14318 412 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 PDE3AQ14432 1141 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 PARP10Q53GL7 1025 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 TBC1D9BQ66K14 1250 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 ITPRIPQ8IWB1 547 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 SETDB2Q96T68 719 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 CWC25Q9NXE8 425 aaPredicted RBP8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 BCORQ6W2J9 1755 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 CARMIL3Q8ND23 1372 aa8.34□□□□□ -1.07
CHRNA3-204ENST00000559002 ARFGEF2Q9Y6D5 1785 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 FAM177BA6PVY3 158 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 NEURL1BA8MQ27 555 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 ALDH1L1O75891 902 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 ZBTB7AO95365 584 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 POLD1P28340 1107 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 NFIXQ14938 502 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 BEND3Q5T5X7 828 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 PPP1R42Q7Z4L9 355 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 ZNF34Q8IZ26 560 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 TMEM57Q8N5G2 664 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 PANK1Q8TE04 598 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 ISCA1Q9BUE6 129 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 PDGFDQ9GZP0 370 aaPredicted RBP8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 MTFR1LQ9H019 292 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 PARP3Q9Y6F1 533 aa8.33□□□□□ -1.08
CHRNA3-204ENST00000559002 RNF123Q5XPI4 1314 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 UBN2Q6ZU65 1347 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 NEFLP07196 543 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 MMP10P09238 476 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 RLBP1P12271 317 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 GTF2E1P29083 439 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms