RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 NBPF5PQ86XG9 351 aaPredicted RBP28.09■■■□□ 2.09
CRNDE-205ENST00000558952 LAS1LQ9Y4W2 734 aaKnown RBP28.09■■■□□ 2.09
CRNDE-205ENST00000558952 ERBB4Q15303 1308 aa28.09■■■□□ 2.09
CRNDE-205ENST00000558952 KIF6Q6ZMV9 814 aa28.08■■■□□ 2.09
CRNDE-205ENST00000558952 CCDC24Q8N4L8 307 aa28.08■■■□□ 2.09
CRNDE-205ENST00000558952 TTLL6Q8N841 843 aa28.08■■■□□ 2.09
CRNDE-205ENST00000558952 NIP7Q9Y221 180 aaKnown RBP eCLIP28.08■■■□□ 2.09
CRNDE-205ENST00000558952 GPBP1L1Q9HC44 474 aaPredicted RBP28.07■■■□□ 2.08
CRNDE-205ENST00000558952 DLEC1Q9Y238 1755 aa28.06■■■□□ 2.08
CRNDE-205ENST00000558952 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
CRNDE-205ENST00000558952 CHL1O00533 1208 aa28.05■■■□□ 2.08
CRNDE-205ENST00000558952 ZNF526Q8TF50 670 aaPredicted RBP28.05■■■□□ 2.08
CRNDE-205ENST00000558952 ZNF622Q969S3 477 aaKnown RBP eCLIP28.05■■■□□ 2.082e-6■■□□□ 14.2
CRNDE-205ENST00000558952 MAP3K15Q6ZN16 1313 aa28.04■■■□□ 2.08
CRNDE-205ENST00000558952 ERVV-1B6SEH8 477 aa28.04■■■□□ 2.08
CRNDE-205ENST00000558952 ANP32CO43423 234 aa28.04■■■□□ 2.08
CRNDE-205ENST00000558952 HLFQ16534 295 aa28.04■■■□□ 2.08
CRNDE-205ENST00000558952 TPTE2Q6XPS3 522 aa28.04■■■□□ 2.08
CRNDE-205ENST00000558952 APAF1O14727 1248 aa28.03■■■□□ 2.08
CRNDE-205ENST00000558952 ANKRD31Q8N7Z5 1873 aa28.02■■■□□ 2.08
CRNDE-205ENST00000558952 TTLL7Q6ZT98 887 aa28.02■■■□□ 2.08
CRNDE-205ENST00000558952 FAM177BA6PVY3 158 aa28.01■■■□□ 2.07
CRNDE-205ENST00000558952 GTF2E1P29083 439 aaPredicted RBP28■■■□□ 2.07
CRNDE-205ENST00000558952 CALD1Q05682 793 aaKnown RBP28■■■□□ 2.07
CRNDE-205ENST00000558952 C9orf131Q5VYM1 1079 aa28■■■□□ 2.07
CRNDE-205ENST00000558952 CFAP44Q96MT7 982 aa28■■■□□ 2.07
CRNDE-205ENST00000558952 ZBTB3Q9H5J0 574 aa28■■■□□ 2.07
CRNDE-205ENST00000558952 C1QTNF8P60827 252 aa27.99■■■□□ 2.07
CRNDE-205ENST00000558952 CCDC184Q52MB2 194 aa27.98■■■□□ 2.07
CRNDE-205ENST00000558952 NECTIN2Q92692 538 aa27.98■■■□□ 2.07
CRNDE-205ENST00000558952 NYXQ9GZU5 481 aa27.98■■■□□ 2.07
CRNDE-205ENST00000558952 STYK1Q6J9G0 422 aa27.97■■■□□ 2.07
CRNDE-205ENST00000558952 CNKSR1Q969H4 720 aa27.97■■■□□ 2.07
CRNDE-205ENST00000558952 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
CRNDE-205ENST00000558952 RNF181Q9P0P0 153 aa27.97■■■□□ 2.07
CRNDE-205ENST00000558952 COL11A2P13942 1736 aaPredicted RBP27.97■■■□□ 2.07
CRNDE-205ENST00000558952 SRGNP10124 158 aa27.96■■■□□ 2.07
CRNDE-205ENST00000558952 PDIA6Q15084 440 aa27.96■■■□□ 2.07
CRNDE-205ENST00000558952 KRT24Q2M2I5 525 aa27.95■■■□□ 2.06
CRNDE-205ENST00000558952 MRS2Q9HD23 443 aa27.95■■■□□ 2.06
CRNDE-205ENST00000558952 ANXA1P04083 346 aa27.94■■■□□ 2.06
CRNDE-205ENST00000558952 HOXB7P09629 217 aa27.94■■■□□ 2.06
CRNDE-205ENST00000558952 PROSER3Q2NL68 480 aa27.94■■■□□ 2.06
CRNDE-205ENST00000558952 GIGYF2Q6Y7W6 1299 aaKnown RBP27.94■■■□□ 2.06
CRNDE-205ENST00000558952 NUP98P52948 1817 aa27.93■■■□□ 2.06
CRNDE-205ENST00000558952 GPTP24298 496 aa27.93■■■□□ 2.06
CRNDE-205ENST00000558952 GNAI1P63096 354 aa27.93■■■□□ 2.06
CRNDE-205ENST00000558952 RASSF7Q02833 373 aa27.93■■■□□ 2.06
CRNDE-205ENST00000558952 MBIPQ9NS73 344 aa27.93■■■□□ 2.06
CRNDE-205ENST00000558952 IFT57Q9NWB7 429 aa27.93■■■□□ 2.06
CRNDE-205ENST00000558952 ZNF219Q9P2Y4 722 aaPredicted RBP27.93■■■□□ 2.06
CRNDE-205ENST00000558952 C21orf2O43822 256 aa27.92■■■□□ 2.06
CRNDE-205ENST00000558952 HDGFL1Q5TGJ6 251 aa27.92■■■□□ 2.06
CRNDE-205ENST00000558952 LRP10Q7Z4F1 713 aa27.92■■■□□ 2.06
CRNDE-205ENST00000558952 DDX21Q9NR30 783 aaKnown RBP eCLIP27.92■■■□□ 2.06
CRNDE-205ENST00000558952 NPR1P16066 1061 aa27.91■■■□□ 2.06
CRNDE-205ENST00000558952 LMNB1P20700 586 aa27.91■■■□□ 2.06
CRNDE-205ENST00000558952 AIMP1Q12904 312 aaKnown RBP27.91■■■□□ 2.06
CRNDE-205ENST00000558952 IBTKQ9P2D0 1353 aaPredicted RBP27.9■■■□□ 2.06
CRNDE-205ENST00000558952 PRPF40BQ6NWY9 871 aaKnown RBP27.9■■■□□ 2.06
CRNDE-205ENST00000558952 COPS6Q7L5N1 327 aa27.9■■■□□ 2.06
CRNDE-205ENST00000558952 ZNF34Q8IZ26 560 aa27.9■■■□□ 2.06
CRNDE-205ENST00000558952 KLRG2A4D1S0 409 aaPredicted RBP27.89■■■□□ 2.06
CRNDE-205ENST00000558952 ZNF853P0CG23 659 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 PARP10Q53GL7 1025 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 SOGA3Q5TF21 947 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 PPP1R42Q7Z4L9 355 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 NUTM1Q86Y26 1132 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 XAGE3Q8WTP9 111 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 CHPF2Q9P2E5 772 aa27.89■■■□□ 2.06
CRNDE-205ENST00000558952 UBN2Q6ZU65 1347 aa27.89■■■□□ 2.05
CRNDE-205ENST00000558952 HSP90AB3PQ58FF7 597 aa27.88■■■□□ 2.05
CRNDE-205ENST00000558952 DUSP27Q5VZP5 1158 aa27.88■■■□□ 2.05
CRNDE-205ENST00000558952 NFKBIEO00221 500 aa27.87■■■□□ 2.05
CRNDE-205ENST00000558952 ERFEQ4G0M1 354 aa27.87■■■□□ 2.05
CRNDE-205ENST00000558952 SUSD4Q5VX71 490 aa27.87■■■□□ 2.05
CRNDE-205ENST00000558952 DBF4Q9UBU7 674 aaPredicted RBP27.87■■■□□ 2.05
CRNDE-205ENST00000558952 KDM2BQ8NHM5 1336 aa27.86■■■□□ 2.05
CRNDE-205ENST00000558952 ZC3H4Q9UPT8 1303 aaKnown RBP27.86■■■□□ 2.05
CRNDE-205ENST00000558952 ABCC12Q96J65 1359 aa27.86■■■□□ 2.05
CRNDE-205ENST00000558952 ALDH1B1P30837 517 aa27.85■■■□□ 2.05
CRNDE-205ENST00000558952 SBF1O95248 1867 aa27.85■■■□□ 2.05
CRNDE-205ENST00000558952 ARFGEF2Q9Y6D5 1785 aa27.84■■■□□ 2.05
CRNDE-205ENST00000558952 CACNA1SQ13698 1873 aa27.84■■■□□ 2.05
CRNDE-205ENST00000558952 SENP3-EIF4A1A0A087X0R7 540 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 KIF3CO14782 793 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 NTSR2O95665 410 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 TAOK3Q9H2K8 898 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 HYPKQ9NX55 129 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 SLX4Q8IY92 1834 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 RIC1Q4ADV7 1423 aa27.83■■■□□ 2.05
CRNDE-205ENST00000558952 CCDC27Q2M243 656 aa27.82■■■□□ 2.04
CRNDE-205ENST00000558952 RPGRQ92834 1020 aaKnown RBP27.82■■■□□ 2.04
CRNDE-205ENST00000558952 UTP14AQ9BVJ6 771 aaKnown RBP27.82■■■□□ 2.04
CRNDE-205ENST00000558952 TNRC6CQ9HCJ0 1690 aaKnown RBP27.81■■■□□ 2.04
CRNDE-205ENST00000558952 PRELPP51888 382 aa27.81■■■□□ 2.04
CRNDE-205ENST00000558952 CCDC93Q567U6 631 aa27.81■■■□□ 2.04
CRNDE-205ENST00000558952 NMRK2Q9NPI5 230 aa27.81■■■□□ 2.04
CRNDE-205ENST00000558952 LTBP3Q9NS15 1303 aa27.81■■■□□ 2.04
CRNDE-205ENST00000558952 ELL2O00472 640 aaPredicted RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms