RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 POTEJP0CG39 1038 aa15.85■□□□□ 0.13
TPM1-216ENST00000558910 GYS1P13807 737 aa15.85■□□□□ 0.13
TPM1-216ENST00000558910 RIPK4P57078 832 aa15.85■□□□□ 0.13
TPM1-216ENST00000558910 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
TPM1-216ENST00000558910 COL5A3P25940 1745 aaPredicted RBP15.85■□□□□ 0.13
TPM1-216ENST00000558910 STARD3NLO95772 234 aa15.84■□□□□ 0.13
TPM1-216ENST00000558910 A1BGP04217 495 aa15.84■□□□□ 0.13
TPM1-216ENST00000558910 YY1P25490 414 aa15.84■□□□□ 0.13
TPM1-216ENST00000558910 BICDL1Q6ZP65 573 aa15.84■□□□□ 0.13
TPM1-216ENST00000558910 RNF25Q96BH1 459 aaPredicted RBP15.84■□□□□ 0.13
TPM1-216ENST00000558910 CEMIPQ8WUJ3 1361 aa15.84■□□□□ 0.13
TPM1-216ENST00000558910 HEG1Q9ULI3 1381 aa15.84■□□□□ 0.13
TPM1-216ENST00000558910 GOLGB1Q14789 3259 aaKnown RBP15.83■□□□□ 0.13
TPM1-216ENST00000558910 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
TPM1-216ENST00000558910 NLGN1Q8N2Q7 840 aa15.83■□□□□ 0.12
TPM1-216ENST00000558910 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
TPM1-216ENST00000558910 PARP3Q9Y6F1 533 aa15.83■□□□□ 0.12
TPM1-216ENST00000558910 ADAMTS7Q9UKP4 1686 aa15.83■□□□□ 0.12
TPM1-216ENST00000558910 UTRNP46939 3433 aa15.82■□□□□ 0.12
TPM1-216ENST00000558910 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
TPM1-216ENST00000558910 VSIG10Q8N0Z9 540 aa15.82■□□□□ 0.12
TPM1-216ENST00000558910 OTUD5Q96G74 571 aa15.82■□□□□ 0.12
TPM1-216ENST00000558910 TBC1D2BQ9UPU7 963 aa15.82■□□□□ 0.12
TPM1-216ENST00000558910 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
TPM1-216ENST00000558910 USP16Q9Y5T5 823 aa15.82■□□□□ 0.12
TPM1-216ENST00000558910 SOS1Q07889 1333 aaPredicted RBP15.82■□□□□ 0.12
TPM1-216ENST00000558910 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
TPM1-216ENST00000558910 COL15A1P39059 1388 aa15.81■□□□□ 0.12
TPM1-216ENST00000558910 CCDC184Q52MB2 194 aa15.81■□□□□ 0.12
TPM1-216ENST00000558910 NGEFQ8N5V2 710 aa15.81■□□□□ 0.12
TPM1-216ENST00000558910 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
TPM1-216ENST00000558910 CD2APQ9Y5K6 639 aa15.8■□□□□ 0.12
TPM1-216ENST00000558910 A0A0G2JLW4 131 aa15.79■□□□□ 0.12
TPM1-216ENST00000558910 YBX3P16989 372 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM1-216ENST00000558910 TMPOP42166 694 aaKnown RBP15.79■□□□□ 0.12
TPM1-216ENST00000558910 IRX5P78411 483 aaPredicted RBP15.79■□□□□ 0.12
TPM1-216ENST00000558910 DDR1Q08345 913 aa15.79■□□□□ 0.12
TPM1-216ENST00000558910 TEX13AQ9BXU3 409 aaPredicted RBP15.79■□□□□ 0.12
TPM1-216ENST00000558910 CICQ96RK0 1608 aaPredicted RBP15.79■□□□□ 0.12
TPM1-216ENST00000558910 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
TPM1-216ENST00000558910 CCDC24Q8N4L8 307 aa15.78■□□□□ 0.12
TPM1-216ENST00000558910 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
TPM1-216ENST00000558910 TSPYL4Q9UJ04 414 aa15.78■□□□□ 0.12
TPM1-216ENST00000558910 ZNF831Q5JPB2 1677 aa15.78■□□□□ 0.12
TPM1-216ENST00000558910 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.12
TPM1-216ENST00000558910 DLG5Q8TDM6 1919 aa15.77■□□□□ 0.12
TPM1-216ENST00000558910 ANP32CO43423 234 aa15.77■□□□□ 0.12
TPM1-216ENST00000558910 NECTIN2Q92692 538 aa15.77■□□□□ 0.12
TPM1-216ENST00000558910 NARFQ9UHQ1 456 aa15.77■□□□□ 0.12
TPM1-216ENST00000558910 C4AP0C0L4 1744 aa15.77■□□□□ 0.11
TPM1-216ENST00000558910 COL24A1Q17RW2 1714 aa15.77■□□□□ 0.11
TPM1-216ENST00000558910 RIOK3O14730 519 aaKnown RBP15.76■□□□□ 0.11
TPM1-216ENST00000558910 NFIXQ14938 502 aa15.76■□□□□ 0.11
TPM1-216ENST00000558910 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
TPM1-216ENST00000558910 A0A087WZG4 1122 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 ECM2O94769 699 aaPredicted RBP15.75■□□□□ 0.11
TPM1-216ENST00000558910 MYL6BP14649 208 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 DPEP1P16444 411 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 PLCG2P16885 1265 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 EIF2S2P20042 333 aaKnown RBP15.75■□□□□ 0.11
TPM1-216ENST00000558910 EIF5P55010 431 aaKnown RBP15.75■□□□□ 0.11
TPM1-216ENST00000558910 GOLGA2Q08379 1002 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 BCS1LQ9Y276 419 aa15.75■□□□□ 0.11
TPM1-216ENST00000558910 FAM177BA6PVY3 158 aa15.74■□□□□ 0.11
TPM1-216ENST00000558910 POLRMTO00411 1230 aaKnown RBP15.74■□□□□ 0.11
TPM1-216ENST00000558910 APAF1O14727 1248 aa15.74■□□□□ 0.11
TPM1-216ENST00000558910 NPHP1O15259 732 aa15.74■□□□□ 0.11
TPM1-216ENST00000558910 CHRNA5P30532 468 aa15.74■□□□□ 0.11
TPM1-216ENST00000558910 TBC1D9BQ66K14 1250 aa15.74■□□□□ 0.11
TPM1-216ENST00000558910 DZIP3Q86Y13 1208 aaKnown RBP15.74■□□□□ 0.11
TPM1-216ENST00000558910 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
TPM1-216ENST00000558910 MRS2Q9HD23 443 aa15.74■□□□□ 0.11
TPM1-216ENST00000558910 IL6STP40189 918 aaPredicted RBP15.73■□□□□ 0.11
TPM1-216ENST00000558910 EIF4A1P60842 406 aaKnown RBP15.73■□□□□ 0.11
TPM1-216ENST00000558910 LMOD3Q0VAK6 560 aa15.73■□□□□ 0.11
TPM1-216ENST00000558910 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
TPM1-216ENST00000558910 SERPINB2P05120 415 aa15.72■□□□□ 0.11
TPM1-216ENST00000558910 TM4SF1P30408 202 aa15.72■□□□□ 0.11
TPM1-216ENST00000558910 MKRN3Q13064 507 aaKnown RBP15.72■□□□□ 0.11
TPM1-216ENST00000558910 KRT24Q2M2I5 525 aa15.72■□□□□ 0.11
TPM1-216ENST00000558910 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
TPM1-216ENST00000558910 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
TPM1-216ENST00000558910 SALL2Q9Y467 1007 aaPredicted RBP15.72■□□□□ 0.11
TPM1-216ENST00000558910 GRIN3BO60391 1043 aa15.7■□□□□ 0.1
TPM1-216ENST00000558910 GIGYF1O75420 1035 aaPredicted RBP15.7■□□□□ 0.1
TPM1-216ENST00000558910 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
TPM1-216ENST00000558910 ANXA1P04083 346 aa15.7■□□□□ 0.1
TPM1-216ENST00000558910 OCEL1Q9H607 264 aa15.7■□□□□ 0.1
TPM1-216ENST00000558910 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
TPM1-216ENST00000558910 C10orf71Q711Q0 1435 aa15.69■□□□□ 0.1
TPM1-216ENST00000558910 PXDNLA1KZ92 1463 aa15.69■□□□□ 0.1
TPM1-216ENST00000558910 TGFB2P61812 414 aa15.68■□□□□ 0.1
TPM1-216ENST00000558910 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
TPM1-216ENST00000558910 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
TPM1-216ENST00000558910 SETDB2Q96T68 719 aa15.68■□□□□ 0.1
TPM1-216ENST00000558910 CARMIL3Q8ND23 1372 aa15.67■□□□□ 0.1
TPM1-216ENST00000558910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.67■□□□□ 0.1
TPM1-216ENST00000558910 HLFQ16534 295 aa15.67■□□□□ 0.1
TPM1-216ENST00000558910 TTLL7Q6ZT98 887 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms