RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SETDB2Q96T68 719 aa17.98■□□□□ 0.47
VPS18-203ENST00000558855 ANKRD36CQ5JPF3 1778 aa17.97■□□□□ 0.47
VPS18-203ENST00000558855 ABCC12Q96J65 1359 aa17.97■□□□□ 0.47
VPS18-203ENST00000558855 C21orf2O43822 256 aa17.97■□□□□ 0.47
VPS18-203ENST00000558855 SRGNP10124 158 aa17.96■□□□□ 0.47
VPS18-203ENST00000558855 TTLL7Q6ZT98 887 aa17.96■□□□□ 0.47
VPS18-203ENST00000558855 SLC51AQ86UW1 340 aa17.96■□□□□ 0.47
VPS18-203ENST00000558855 NGEFQ8N5V2 710 aa17.96■□□□□ 0.47
VPS18-203ENST00000558855 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
VPS18-203ENST00000558855 LAMB2P55268 1798 aa17.96■□□□□ 0.47
VPS18-203ENST00000558855 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
VPS18-203ENST00000558855 TOMM70O94826 608 aa17.95■□□□□ 0.46
VPS18-203ENST00000558855 LMNB1P20700 586 aa17.95■□□□□ 0.46
VPS18-203ENST00000558855 PDE6BP35913 854 aa17.95■□□□□ 0.46
VPS18-203ENST00000558855 PRPF40BQ6NWY9 871 aaKnown RBP17.94■□□□□ 0.46
VPS18-203ENST00000558855 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
VPS18-203ENST00000558855 CLEC4GQ6UXB4 293 aa17.94■□□□□ 0.46
VPS18-203ENST00000558855 CCDC146Q8IYE0 955 aa17.94■□□□□ 0.46
VPS18-203ENST00000558855 NIP7Q9Y221 180 aaKnown RBP eCLIP17.94■□□□□ 0.46
VPS18-203ENST00000558855 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
VPS18-203ENST00000558855 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
VPS18-203ENST00000558855 HTRA3P83110 453 aa17.93■□□□□ 0.46
VPS18-203ENST00000558855 RALBP1Q15311 655 aa17.93■□□□□ 0.46
VPS18-203ENST00000558855 LRP10Q7Z4F1 713 aa17.93■□□□□ 0.46
VPS18-203ENST00000558855 NBPF5PQ86XG9 351 aaPredicted RBP17.93■□□□□ 0.46
VPS18-203ENST00000558855 UBN2Q6ZU65 1347 aa17.93■□□□□ 0.46
VPS18-203ENST00000558855 POTECB2RU33 542 aa17.92■□□□□ 0.46
VPS18-203ENST00000558855 MYL6BP14649 208 aa17.92■□□□□ 0.46
VPS18-203ENST00000558855 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
VPS18-203ENST00000558855 ST5P78524 1137 aa17.92■□□□□ 0.46
VPS18-203ENST00000558855 STYK1Q6J9G0 422 aa17.92■□□□□ 0.46
VPS18-203ENST00000558855 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
VPS18-203ENST00000558855 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
VPS18-203ENST00000558855 SNED1Q8TER0 1413 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 ANXA1P04083 346 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 RIPK4P57078 832 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 PDIA6Q15084 440 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 KRT24Q2M2I5 525 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 PNISRQ8TF01 805 aaKnown RBP17.91■□□□□ 0.46
VPS18-203ENST00000558855 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 MAP3K15Q6ZN16 1313 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
VPS18-203ENST00000558855 COL4A5P29400 1685 aa17.9■□□□□ 0.46
VPS18-203ENST00000558855 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
VPS18-203ENST00000558855 NEFMP07197 916 aa17.9■□□□□ 0.46
VPS18-203ENST00000558855 NUTM1Q86Y26 1132 aa17.9■□□□□ 0.46
VPS18-203ENST00000558855 RBM46Q8TBY0 533 aaKnown RBP17.9■□□□□ 0.46
VPS18-203ENST00000558855 ZBTB3Q9H5J0 574 aa17.9■□□□□ 0.46
VPS18-203ENST00000558855 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
VPS18-203ENST00000558855 TAF1P21675 1872 aa17.89■□□□□ 0.45
VPS18-203ENST00000558855 GLTPD2A6NH11 291 aa17.89■□□□□ 0.45
VPS18-203ENST00000558855 NPHP1O15259 732 aa17.89■□□□□ 0.45
VPS18-203ENST00000558855 MASTLQ96GX5 879 aa17.89■□□□□ 0.45
VPS18-203ENST00000558855 TSPYL4Q9UJ04 414 aa17.89■□□□□ 0.45
VPS18-203ENST00000558855 LTBP3Q9NS15 1303 aa17.89■□□□□ 0.45
VPS18-203ENST00000558855 ZC3H4Q9UPT8 1303 aaKnown RBP17.89■□□□□ 0.45
VPS18-203ENST00000558855 GPTP24298 496 aa17.88■□□□□ 0.45
VPS18-203ENST00000558855 DNAJC5GQ8N7S2 189 aa17.88■□□□□ 0.45
VPS18-203ENST00000558855 TRIM35Q9UPQ4 493 aa17.88■□□□□ 0.45
VPS18-203ENST00000558855 PDZRN3Q9UPQ7 1066 aa17.88■□□□□ 0.45
VPS18-203ENST00000558855 RGL2O15211 777 aa17.87■□□□□ 0.45
VPS18-203ENST00000558855 NEUROD2Q15784 382 aa17.87■□□□□ 0.45
VPS18-203ENST00000558855 ERFEQ4G0M1 354 aa17.87■□□□□ 0.45
VPS18-203ENST00000558855 C3orf67Q6ZVT6 689 aa17.87■□□□□ 0.45
VPS18-203ENST00000558855 CNKSR1Q969H4 720 aa17.87■□□□□ 0.45
VPS18-203ENST00000558855 NPR1P16066 1061 aa17.86■□□□□ 0.45
VPS18-203ENST00000558855 SUSD4Q5VX71 490 aa17.86■□□□□ 0.45
VPS18-203ENST00000558855 NECTIN2Q92692 538 aa17.86■□□□□ 0.45
VPS18-203ENST00000558855 TAOK3Q9H2K8 898 aa17.86■□□□□ 0.45
VPS18-203ENST00000558855 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
VPS18-203ENST00000558855 ERVV-1B6SEH8 477 aa17.85■□□□□ 0.45
VPS18-203ENST00000558855 COL4A1P02462 1669 aa17.85■□□□□ 0.45
VPS18-203ENST00000558855 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
VPS18-203ENST00000558855 APLP1P51693 650 aa17.85■□□□□ 0.45
VPS18-203ENST00000558855 TPTE2Q6XPS3 522 aa17.85■□□□□ 0.45
VPS18-203ENST00000558855 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
VPS18-203ENST00000558855 RIC1Q4ADV7 1423 aa17.84■□□□□ 0.45
VPS18-203ENST00000558855 NTSR2O95665 410 aa17.84■□□□□ 0.45
VPS18-203ENST00000558855 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
VPS18-203ENST00000558855 ZNF34Q8IZ26 560 aa17.84■□□□□ 0.45
VPS18-203ENST00000558855 PNNQ9H307 717 aaKnown RBP17.84■□□□□ 0.45
VPS18-203ENST00000558855 IBTKQ9P2D0 1353 aaPredicted RBP17.83■□□□□ 0.45
VPS18-203ENST00000558855 DDNO94850 711 aaPredicted RBP17.83■□□□□ 0.44
VPS18-203ENST00000558855 POTEIP0CG38 1075 aa17.83■□□□□ 0.44
VPS18-203ENST00000558855 POTEJP0CG39 1038 aa17.83■□□□□ 0.44
VPS18-203ENST00000558855 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
VPS18-203ENST00000558855 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.44
VPS18-203ENST00000558855 PRKRIP1Q9H875 184 aaPredicted RBP17.83■□□□□ 0.44
VPS18-203ENST00000558855 ADAMTSL1Q8N6G6 1762 aa17.83■□□□□ 0.44
VPS18-203ENST00000558855 LTBP1Q14766 1721 aa17.83■□□□□ 0.44
VPS18-203ENST00000558855 SCN4AP35499 1836 aa17.82■□□□□ 0.44
VPS18-203ENST00000558855 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
VPS18-203ENST00000558855 ZNF541Q9H0D2 1346 aa17.82■□□□□ 0.44
VPS18-203ENST00000558855 FSTL1Q12841 308 aa17.82■□□□□ 0.44
VPS18-203ENST00000558855 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
VPS18-203ENST00000558855 ZNF277Q9NRM2 450 aaPredicted RBP17.82■□□□□ 0.44
VPS18-203ENST00000558855 CHL1O00533 1208 aa17.81■□□□□ 0.44
VPS18-203ENST00000558855 VEGFAP15692 232 aaPredicted RBP17.81■□□□□ 0.44
VPS18-203ENST00000558855 CCDC93Q567U6 631 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms