RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 U2AF1L5P0DN76 240 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-212ENST00000558655 RBM10P98175 930 aaKnown RBP5.29□□□□□ -1.56
ZEB1-212ENST00000558655 U2AF1Q01081 240 aaKnown RBP eCLIP5.29□□□□□ -1.56
ZEB1-212ENST00000558655 NFE2L2Q16236 605 aa5.29□□□□□ -1.56
ZEB1-212ENST00000558655 SULT6B1Q6IMI4 303 aa5.29□□□□□ -1.56
ZEB1-212ENST00000558655 LARP1Q6PKG0 1096 aaKnown RBP5.29□□□□□ -1.56
ZEB1-212ENST00000558655 CIZ1Q9ULV3 898 aaPredicted RBP5.29□□□□□ -1.56
ZEB1-212ENST00000558655 LY75O60449 1722 aa5.29□□□□□ -1.56
ZEB1-212ENST00000558655 CEMIPQ8WUJ3 1361 aa5.29□□□□□ -1.56
ZEB1-212ENST00000558655 SOX12O15370 315 aa5.28□□□□□ -1.56
ZEB1-212ENST00000558655 NKX1-1Q15270 411 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-212ENST00000558655 TCP11L2Q8N4U5 519 aa5.28□□□□□ -1.56
ZEB1-212ENST00000558655 GAS2L2Q8NHY3 880 aa5.28□□□□□ -1.56
ZEB1-212ENST00000558655 SYMPKQ92797 1274 aaKnown RBP5.28□□□□□ -1.56
ZEB1-212ENST00000558655 SALL2Q9Y467 1007 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-212ENST00000558655 IL16Q14005 1332 aa5.28□□□□□ -1.56
ZEB1-212ENST00000558655 ZBED9Q6R2W3 1325 aa5.28□□□□□ -1.56
ZEB1-212ENST00000558655 PRKAR2BP31323 418 aa5.28□□□□□ -1.56
ZEB1-212ENST00000558655 N4BP2Q86UW6 1770 aaPredicted RBP5.28□□□□□ -1.56
ZEB1-212ENST00000558655 IL2RBP14784 551 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 TATP17735 454 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 TMPOP42166 694 aaKnown RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PLEKHO1Q53GL0 409 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 RASEFQ8IZ41 740 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PLCD4Q9BRC7 762 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PLSCR2Q9NRY7 297 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 BABAM1Q9NWV8 329 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 BTAF1O14981 1849 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 COL5A3P25940 1745 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 KDM6AO15550 1401 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 U2SURPO15042 1029 aaKnown RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 SMARCA5O60264 1052 aaPredicted RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 EVA1CP58658 441 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 LMOD3Q0VAK6 560 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 TOM1L2Q6ZVM7 507 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 RETREG2Q8NC44 543 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PHACTR3Q96KR7 559 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 WDR70Q9NW82 654 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PCDH11XQ9BZA7 1347 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PCDH11YQ9BZA8 1340 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 YBX3P16989 372 aaKnown RBP eCLIP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 PDE3BQ13370 1112 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 AKAP4Q5JQC9 854 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 WDR63Q8IWG1 891 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 TRMT2AQ8IZ69 625 aaKnown RBP5.27□□□□□ -1.57
ZEB1-212ENST00000558655 FBXW7Q969H0 707 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 NLRP2Q9NX02 1062 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 TRIM35Q9UPQ4 493 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 SPG7Q9UQ90 795 aa5.27□□□□□ -1.57
ZEB1-212ENST00000558655 KIF13BQ9NQT8 1826 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 ARFGEF1Q9Y6D6 1849 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 TJP1Q07157 1748 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 MAPK8IP3Q9UPT6 1336 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 TAF1LQ8IZX4 1826 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 LBX1P52954 281 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 RAPGEF4Q8WZA2 1011 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 CLUAP1Q96AJ1 413 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 LTV1Q96GA3 475 aaPredicted RBP5.26□□□□□ -1.57
ZEB1-212ENST00000558655 C5P01031 1676 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 HSP90AB1P08238 724 aaKnown RBP5.26□□□□□ -1.57
ZEB1-212ENST00000558655 HMOX1P09601 288 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 CSB-PGBD3P0DP91 1061 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 COL9A1P20849 921 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 MTHFSDQ2M296 383 aaKnown RBP5.26□□□□□ -1.57
ZEB1-212ENST00000558655 SLC51AQ86UW1 340 aa5.26□□□□□ -1.57
ZEB1-212ENST00000558655 ZNF853P0CG23 659 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 PHKG2P15735 406 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 CALD1Q05682 793 aaKnown RBP5.25□□□□□ -1.57
ZEB1-212ENST00000558655 B4GALNT3Q6L9W6 998 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 USHBP1Q8N6Y0 703 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 KCNV2Q8TDN2 545 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 STRN4Q9NRL3 753 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 KCPQ6ZWJ8 1503 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 LTBP1Q14766 1721 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 SOS1Q07889 1333 aaPredicted RBP5.25□□□□□ -1.57
ZEB1-212ENST00000558655 GNAT3A8MTJ3 354 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 APAF1O14727 1248 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 TRIM37O94972 964 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 NEFMP07197 916 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 NUBP1P53384 320 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 IFNL2Q8IZJ0 200 aa5.25□□□□□ -1.57
ZEB1-212ENST00000558655 ZCRB1Q8TBF4 217 aaKnown RBP5.25□□□□□ -1.57
ZEB1-212ENST00000558655 LOC102724159A0A0B4J2E5 919 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 ERVV-2B6SEH9 535 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 CYP27B1O15528 508 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 BRD1O95696 1058 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 PWP2Q15269 919 aaKnown RBP5.24□□□□□ -1.57
ZEB1-212ENST00000558655 PKN2Q16513 984 aaKnown RBP5.24□□□□□ -1.57
ZEB1-212ENST00000558655 FAM43BQ6ZT52 329 aaPredicted RBP5.24□□□□□ -1.57
ZEB1-212ENST00000558655 WWC1Q8IX03 1113 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 RNF25Q96BH1 459 aaPredicted RBP5.24□□□□□ -1.57
ZEB1-212ENST00000558655 TSPYL2Q9H2G4 693 aaPredicted RBP5.24□□□□□ -1.57
ZEB1-212ENST00000558655 HEG1Q9ULI3 1381 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 ERBB4Q15303 1308 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 ZBTB7AO95365 584 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 ANAPC15P60006 121 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 ZNF530Q6P9A1 599 aaPredicted RBP5.24□□□□□ -1.57
ZEB1-212ENST00000558655 CCDC146Q8IYE0 955 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 DCAF5Q96JK2 942 aa5.24□□□□□ -1.57
ZEB1-212ENST00000558655 MCOLN1Q9GZU1 580 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms