RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 C5P01031 1676 aa13.47□□□□□ -0.25
PSMA4-207ENST00000558635 PSDA5PKW4 1024 aaPredicted RBP13.46□□□□□ -0.25
PSMA4-207ENST00000558635 GNPATO15228 680 aa13.46□□□□□ -0.25
PSMA4-207ENST00000558635 A1BGP04217 495 aa13.46□□□□□ -0.25
PSMA4-207ENST00000558635 DUSP27Q5VZP5 1158 aa13.46□□□□□ -0.25
PSMA4-207ENST00000558635 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
PSMA4-207ENST00000558635 AMIGO3Q86WK7 504 aa13.46□□□□□ -0.25
PSMA4-207ENST00000558635 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
PSMA4-207ENST00000558635 C4BP0C0L5 1744 aa13.45□□□□□ -0.26
PSMA4-207ENST00000558635 E9PSI1 815 aa13.45□□□□□ -0.26
PSMA4-207ENST00000558635 ELL2O00472 640 aaPredicted RBP13.45□□□□□ -0.26
PSMA4-207ENST00000558635 RPS6KA4O75676 772 aa13.45□□□□□ -0.26
PSMA4-207ENST00000558635 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
PSMA4-207ENST00000558635 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
PSMA4-207ENST00000558635 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
PSMA4-207ENST00000558635 ZBTB1Q9Y2K1 713 aa13.45□□□□□ -0.26
PSMA4-207ENST00000558635 TAF1LQ8IZX4 1826 aa13.45□□□□□ -0.26
PSMA4-207ENST00000558635 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
PSMA4-207ENST00000558635 PHF14O94880 888 aa13.44□□□□□ -0.26
PSMA4-207ENST00000558635 HOXB7P09629 217 aa13.44□□□□□ -0.26
PSMA4-207ENST00000558635 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
PSMA4-207ENST00000558635 ZNF467Q7Z7K2 595 aaPredicted RBP13.44□□□□□ -0.26
PSMA4-207ENST00000558635 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
PSMA4-207ENST00000558635 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
PSMA4-207ENST00000558635 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
PSMA4-207ENST00000558635 ZBED9Q6R2W3 1325 aa13.43□□□□□ -0.26
PSMA4-207ENST00000558635 PNPLA7Q6ZV29 1317 aa13.43□□□□□ -0.26
PSMA4-207ENST00000558635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
PSMA4-207ENST00000558635 COL5A3P25940 1745 aaPredicted RBP13.43□□□□□ -0.26
PSMA4-207ENST00000558635 PIP4K2AP48426 406 aaPredicted RBP13.43□□□□□ -0.26
PSMA4-207ENST00000558635 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
PSMA4-207ENST00000558635 NBPF26B4DH59 902 aa13.42□□□□□ -0.26
PSMA4-207ENST00000558635 SSFA2P28290 1259 aa13.42□□□□□ -0.26
PSMA4-207ENST00000558635 TRAPPC3LQ5T215 181 aa13.42□□□□□ -0.26
PSMA4-207ENST00000558635 HDGFL1Q5TGJ6 251 aa13.42□□□□□ -0.26
PSMA4-207ENST00000558635 NBPF10Q6P3W6 841 aaKnown RBP13.42□□□□□ -0.26
PSMA4-207ENST00000558635 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
PSMA4-207ENST00000558635 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
PSMA4-207ENST00000558635 NBPF15Q8N660 670 aa13.42□□□□□ -0.26
PSMA4-207ENST00000558635 FLAD1Q8NFF5 587 aa13.42□□□□□ -0.26
PSMA4-207ENST00000558635 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 SOS1Q07889 1333 aaPredicted RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 EIF5P55010 431 aaKnown RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 TWISTNBQ3B726 338 aaPredicted RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 ARHGEF1Q92888 912 aaKnown RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 YTHDC1Q96MU7 727 aaKnown RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 ZNF330Q9Y3S2 320 aaPredicted RBP13.41□□□□□ -0.26
PSMA4-207ENST00000558635 MYL6BP14649 208 aa13.4□□□□□ -0.26
PSMA4-207ENST00000558635 PDIA6Q15084 440 aa13.4□□□□□ -0.26
PSMA4-207ENST00000558635 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 VAMP4O75379 141 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 SEC24BO95487 1268 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 ANXA1P04083 346 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 RFC4P35249 363 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 PROSER3Q2NL68 480 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 IER5LQ5T953 404 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 COL15A1P39059 1388 aa13.39□□□□□ -0.27
PSMA4-207ENST00000558635 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 A0A087WZG4 1122 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
PSMA4-207ENST00000558635 ARXQ96QS3 562 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 CHMP4AQ9BY43 222 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 DDX21Q9NR30 783 aaKnown RBP eCLIP13.38□□□□□ -0.27
PSMA4-207ENST00000558635 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
PSMA4-207ENST00000558635 SRP68Q9UHB9 627 aaKnown RBP13.38□□□□□ -0.27
PSMA4-207ENST00000558635 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
PSMA4-207ENST00000558635 TUBGCP6Q96RT7 1819 aa13.37□□□□□ -0.27
PSMA4-207ENST00000558635 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
PSMA4-207ENST00000558635 ZBTB7AO95365 584 aa13.37□□□□□ -0.27
PSMA4-207ENST00000558635 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
PSMA4-207ENST00000558635 OTUD5Q96G74 571 aa13.37□□□□□ -0.27
PSMA4-207ENST00000558635 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
PSMA4-207ENST00000558635 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
PSMA4-207ENST00000558635 ZPR1O75312 459 aa13.36□□□□□ -0.27
PSMA4-207ENST00000558635 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
PSMA4-207ENST00000558635 SLC16A10Q8TF71 515 aa13.36□□□□□ -0.27
PSMA4-207ENST00000558635 NARFQ9UHQ1 456 aa13.36□□□□□ -0.27
PSMA4-207ENST00000558635 USP42Q9H9J4 1324 aaKnown RBP13.36□□□□□ -0.27
PSMA4-207ENST00000558635 QSER1Q2KHR3 1735 aa13.36□□□□□ -0.27
PSMA4-207ENST00000558635 USPL1Q5W0Q7 1092 aa13.35□□□□□ -0.27
PSMA4-207ENST00000558635 MSL1Q68DK7 614 aa13.35□□□□□ -0.27
PSMA4-207ENST00000558635 TTLL7Q6ZT98 887 aa13.35□□□□□ -0.27
PSMA4-207ENST00000558635 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
PSMA4-207ENST00000558635 STK31Q9BXU1 1019 aa13.35□□□□□ -0.27
PSMA4-207ENST00000558635 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
PSMA4-207ENST00000558635 COLQQ9Y215 455 aaPredicted RBP13.35□□□□□ -0.27
PSMA4-207ENST00000558635 CAMTA2O94983 1202 aa13.34□□□□□ -0.27
PSMA4-207ENST00000558635 GYS1P13807 737 aa13.34□□□□□ -0.27
PSMA4-207ENST00000558635 AIMP1Q12904 312 aaKnown RBP13.34□□□□□ -0.27
PSMA4-207ENST00000558635 COPS6Q7L5N1 327 aa13.34□□□□□ -0.27
PSMA4-207ENST00000558635 MTFR1LQ9H019 292 aa13.34□□□□□ -0.27
PSMA4-207ENST00000558635 CASZ1Q86V15 1759 aa13.34□□□□□ -0.27
PSMA4-207ENST00000558635 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
PSMA4-207ENST00000558635 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
PSMA4-207ENST00000558635 PHAXQ9H814 394 aaKnown RBP13.33□□□□□ -0.28
PSMA4-207ENST00000558635 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
PSMA4-207ENST00000558635 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms