RNA–Protein interactions for RNA: ENST00000558540.5

MRVI1-217, Transcript of murine retrovirus integration site 1 homolog, humanhuman

TSL 2 BASIC

Gene MRVI1, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-217ENST00000558540 NUP98P52948 1817 aa13.2□□□□□ -0.3
MRVI1-217ENST00000558540 AFF2P51816 1311 aa13.2□□□□□ -0.3
MRVI1-217ENST00000558540 EXOC5O00471 708 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 CABP4P57796 275 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 BBXQ8WY36 941 aaPredicted RBP13.19□□□□□ -0.3
MRVI1-217ENST00000558540 USP21Q9UK80 565 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 CHAMP1Q96JM3 812 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 C8orf37Q96NL8 207 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 CBX1P83916 185 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 PDE4CQ08493 712 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 MARCH10Q8NA82 808 aaPredicted RBP13.19□□□□□ -0.3
MRVI1-217ENST00000558540 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 PRDM4Q9UKN5 801 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 DDX49Q9Y6V7 483 aaKnown RBP13.19□□□□□ -0.3
MRVI1-217ENST00000558540 C4AP0C0L4 1744 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
MRVI1-217ENST00000558540 ADCY9O60503 1353 aa13.18□□□□□ -0.3
MRVI1-217ENST00000558540 MYH14Q7Z406 1995 aaKnown RBP13.18□□□□□ -0.3
MRVI1-217ENST00000558540 TPM2P07951 284 aa13.18□□□□□ -0.3
MRVI1-217ENST00000558540 DDB1Q16531 1140 aa13.18□□□□□ -0.3
MRVI1-217ENST00000558540 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
MRVI1-217ENST00000558540 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
MRVI1-217ENST00000558540 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
MRVI1-217ENST00000558540 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
MRVI1-217ENST00000558540 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
MRVI1-217ENST00000558540 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
MRVI1-217ENST00000558540 HDGFL1Q5TGJ6 251 aa13.17□□□□□ -0.3
MRVI1-217ENST00000558540 GJD4Q96KN9 370 aaPredicted RBP13.17□□□□□ -0.3
MRVI1-217ENST00000558540 CHMP4BQ9H444 224 aaKnown RBP13.17□□□□□ -0.3
MRVI1-217ENST00000558540 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
MRVI1-217ENST00000558540 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
MRVI1-217ENST00000558540 COL15A1P39059 1388 aa13.17□□□□□ -0.3
MRVI1-217ENST00000558540 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
MRVI1-217ENST00000558540 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
MRVI1-217ENST00000558540 TRPC5Q9UL62 973 aaPredicted RBP13.17□□□□□ -0.3
MRVI1-217ENST00000558540 FGD1P98174 961 aa13.16□□□□□ -0.3
MRVI1-217ENST00000558540 FLIIQ13045 1269 aa13.16□□□□□ -0.3
MRVI1-217ENST00000558540 PIGBQ92521 554 aa13.16□□□□□ -0.3
MRVI1-217ENST00000558540 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
MRVI1-217ENST00000558540 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
MRVI1-217ENST00000558540 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
MRVI1-217ENST00000558540 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
MRVI1-217ENST00000558540 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
MRVI1-217ENST00000558540 UBR3Q6ZT12 1888 aa13.15□□□□□ -0.3
MRVI1-217ENST00000558540 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
MRVI1-217ENST00000558540 PLCB2Q00722 1185 aa13.15□□□□□ -0.3
MRVI1-217ENST00000558540 CAVIN1Q6NZI2 390 aaKnown RBP13.15□□□□□ -0.3
MRVI1-217ENST00000558540 G2E3Q7L622 706 aa13.15□□□□□ -0.3
MRVI1-217ENST00000558540 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
MRVI1-217ENST00000558540 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
MRVI1-217ENST00000558540 TMOD3Q9NYL9 352 aa13.15□□□□□ -0.3
MRVI1-217ENST00000558540 MYH3P11055 1940 aa13.15□□□□□ -0.3
MRVI1-217ENST00000558540 SPDYE4A6NLX3 237 aa13.15□□□□□ -0.31
MRVI1-217ENST00000558540 HDAC1Q13547 482 aaPredicted RBP13.15□□□□□ -0.31
MRVI1-217ENST00000558540 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.31
MRVI1-217ENST00000558540 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.31
MRVI1-217ENST00000558540 CCT4P50991 539 aaKnown RBP13.14□□□□□ -0.31
MRVI1-217ENST00000558540 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
MRVI1-217ENST00000558540 TTC5Q8N0Z6 440 aa13.14□□□□□ -0.31
MRVI1-217ENST00000558540 UTYO14607 1347 aa13.14□□□□□ -0.31
MRVI1-217ENST00000558540 SSFA2P28290 1259 aa13.13□□□□□ -0.31
MRVI1-217ENST00000558540 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
MRVI1-217ENST00000558540 FBXO41Q8TF61 875 aa13.13□□□□□ -0.31
MRVI1-217ENST00000558540 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
MRVI1-217ENST00000558540 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
MRVI1-217ENST00000558540 ZBTB22O15209 634 aa13.13□□□□□ -0.31
MRVI1-217ENST00000558540 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
MRVI1-217ENST00000558540 MCTP1Q6DN14 999 aa13.12□□□□□ -0.31
MRVI1-217ENST00000558540 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
MRVI1-217ENST00000558540 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
MRVI1-217ENST00000558540 DDX60Q8IY21 1712 aaKnown RBP13.12□□□□□ -0.31
MRVI1-217ENST00000558540 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
MRVI1-217ENST00000558540 PROSER3Q2NL68 480 aa13.11□□□□□ -0.31
MRVI1-217ENST00000558540 ZNF830Q96NB3 372 aaPredicted RBP13.11□□□□□ -0.31
MRVI1-217ENST00000558540 SLC4A9Q96Q91 983 aa13.11□□□□□ -0.31
MRVI1-217ENST00000558540 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
MRVI1-217ENST00000558540 BEND3Q5T5X7 828 aa13.1□□□□□ -0.31
MRVI1-217ENST00000558540 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.1□□□□□ -0.31
MRVI1-217ENST00000558540 C17orf53Q8N3J3 647 aaPredicted RBP13.1□□□□□ -0.31
MRVI1-217ENST00000558540 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
MRVI1-217ENST00000558540 PHAXQ9H814 394 aaKnown RBP13.1□□□□□ -0.31
MRVI1-217ENST00000558540 LRP5O75197 1615 aa13.1□□□□□ -0.31
MRVI1-217ENST00000558540 RGL2O15211 777 aa13.1□□□□□ -0.31
MRVI1-217ENST00000558540 MEX3CQ5U5Q3 659 aaKnown RBP13.1□□□□□ -0.31
MRVI1-217ENST00000558540 KSR2Q6VAB6 950 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 NBPF26B4DH59 902 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 NBPF14Q5TI25 921 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
MRVI1-217ENST00000558540 NBPF10Q6P3W6 841 aaKnown RBP13.09□□□□□ -0.31
MRVI1-217ENST00000558540 NOL8Q76FK4 1167 aaKnown RBP13.09□□□□□ -0.31
MRVI1-217ENST00000558540 NBPF15Q8N660 670 aa13.09□□□□□ -0.31
MRVI1-217ENST00000558540 ALDH1L1O75891 902 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms