RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 FAM53CQ9NYF3 392 aa11.68□□□□□ -0.54
TRPM1-207ENST00000558445 SNUPNO95149 360 aaKnown RBP11.67□□□□□ -0.54
TRPM1-207ENST00000558445 TUBBP07437 444 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 RUNDC1Q96C34 613 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 RTEL1-TNFRSF6BF6WH68 1400 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 SGSM2O43147 1006 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
TRPM1-207ENST00000558445 KLHL23Q8NBE8 558 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 CHAMP1Q96JM3 812 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 PAX7P23759 505 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 CWC27Q6UX04 472 aaKnown RBP11.67□□□□□ -0.54
TRPM1-207ENST00000558445 NFXL1Q6ZNB6 911 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 PDE11AQ9HCR9 933 aa11.67□□□□□ -0.54
TRPM1-207ENST00000558445 KDM5BQ9UGL1 1544 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 FRMD3A2A2Y4 597 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 APBB1O00213 710 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 PPP2R3AQ06190 1150 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 ANO2Q9NQ90 1003 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 NRBP1Q9UHY1 535 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 EXOC6BQ9Y2D4 811 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 SMARCA5O60264 1052 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-207ENST00000558445 CEP57L1Q8IYX8 460 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
TRPM1-207ENST00000558445 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 ZNF521Q96K83 1311 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 ZSCAN22P10073 491 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-207ENST00000558445 LONRF2Q1L5Z9 754 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-207ENST00000558445 MCM3P25205 808 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 ENOX2Q16206 610 aaKnown RBP11.66□□□□□ -0.54
TRPM1-207ENST00000558445 CBX8Q9HC52 389 aa11.66□□□□□ -0.54
TRPM1-207ENST00000558445 KINO60870 393 aaKnown RBP11.65□□□□□ -0.54
TRPM1-207ENST00000558445 PRPHP41219 470 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 CCDC181Q5TID7 509 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 FAN1Q9Y2M0 1017 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 CCDC151A5D8V7 595 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 SLC8A1P32418 973 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 SPATS2Q86XZ4 545 aaKnown RBP11.65□□□□□ -0.54
TRPM1-207ENST00000558445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRPM1-207ENST00000558445 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 FYCO1Q9BQS8 1478 aa11.65□□□□□ -0.54
TRPM1-207ENST00000558445 CDC25BP30305 580 aa11.65□□□□□ -0.55
TRPM1-207ENST00000558445 ETF1P62495 437 aaKnown RBP11.65□□□□□ -0.55
TRPM1-207ENST00000558445 DCTN1Q14203 1278 aa11.65□□□□□ -0.55
TRPM1-207ENST00000558445 CCDC73Q6ZRK6 1079 aa11.65□□□□□ -0.55
TRPM1-207ENST00000558445 USP26Q9BXU7 913 aa11.65□□□□□ -0.55
TRPM1-207ENST00000558445 CTTNBP2Q8WZ74 1663 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 SCRN1Q12765 414 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 PUS7Q96PZ0 661 aaKnown RBP11.64□□□□□ -0.55
TRPM1-207ENST00000558445 ANKRD18BA2A2Z9 1011 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 MAFGO15525 162 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 CCT5P48643 541 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 GNG11P61952 73 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 RABGGTAQ92696 567 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 KIF2CQ99661 725 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.64□□□□□ -0.55
TRPM1-207ENST00000558445 STX6O43752 255 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 FBXW10Q5XX13 1052 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 FAM169AQ9Y6X4 670 aa11.64□□□□□ -0.55
TRPM1-207ENST00000558445 HSPA4P34932 840 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 MICAL1Q8TDZ2 1067 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 BICC1Q9H694 974 aaKnown RBP11.63□□□□□ -0.55
TRPM1-207ENST00000558445 KANK1Q14678 1352 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
TRPM1-207ENST00000558445 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 CCDC114Q96M63 670 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 MPHOSPH8Q99549 860 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 TNNQ9UQP3 1299 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 C21orf2O43822 256 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 UTP14AQ9BVJ6 771 aaKnown RBP11.63□□□□□ -0.55
TRPM1-207ENST00000558445 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 ABCD1P33897 745 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 SNCBQ16143 134 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 SPDL1Q96EA4 605 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 ZDHHC9Q9Y397 364 aa11.63□□□□□ -0.55
TRPM1-207ENST00000558445 CFAP65Q6ZU64 1925 aaKnown RBP11.62□□□□□ -0.55
TRPM1-207ENST00000558445 A6NNZ2 444 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 PDCP20941 246 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 RBM5P52756 815 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRPM1-207ENST00000558445 TUBB8Q3ZCM7 444 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 LRRC23Q53EV4 343 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-207ENST00000558445 TMEM57Q8N5G2 664 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 DNAJC25Q9H1X3 360 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 FAM204AQ9H8W3 233 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 CAMSAP2Q08AD1 1489 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 RPS6KA5O75582 802 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 ECM2O94769 699 aaPredicted RBP11.62□□□□□ -0.55
TRPM1-207ENST00000558445 POLD1P28340 1107 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 UPF3BQ9BZI7 483 aaKnown RBP11.62□□□□□ -0.55
TRPM1-207ENST00000558445 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 PLEKHA4Q9H4M7 779 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 PRDM16Q9HAZ2 1276 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 ANO10Q9NW15 660 aa11.62□□□□□ -0.55
TRPM1-207ENST00000558445 ZRANB2O95218 330 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRPM1-207ENST00000558445 TCP11L2Q8N4U5 519 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms