RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 FEZ1Q99689 392 aa16.1■□□□□ 0.17
SPG11-210ENST00000558319 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
SPG11-210ENST00000558319 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
SPG11-210ENST00000558319 CCDC12Q8WUD4 166 aaPredicted RBP16.1■□□□□ 0.17
SPG11-210ENST00000558319 RBM26Q5T8P6 1007 aaKnown RBP16.1■□□□□ 0.17
SPG11-210ENST00000558319 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
SPG11-210ENST00000558319 JADE2Q9NQC1 790 aa16.1■□□□□ 0.17
SPG11-210ENST00000558319 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
SPG11-210ENST00000558319 SPATA24Q86W54 205 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 MCM6Q14566 821 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 TNIP1Q15025 636 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 PPP4R3AQ6IN85 833 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 PPM1EQ8WY54 764 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 PAIP2Q9BPZ3 127 aaKnown RBP16.09■□□□□ 0.17
SPG11-210ENST00000558319 FAM170AA1A519 330 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 SPECC1LQ69YQ0 1117 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
SPG11-210ENST00000558319 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.17
SPG11-210ENST00000558319 GOLIM4O00461 696 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 HSF2BPO75031 334 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 DESP17661 470 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 CETN2P41208 172 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 GNG11P61952 73 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 FBF1Q8TES7 1133 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 SLC12A7Q9Y666 1083 aa16.08■□□□□ 0.17
SPG11-210ENST00000558319 PICALMQ13492 652 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.16
SPG11-210ENST00000558319 CNNM3Q8NE01 707 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 KIF20AO95235 890 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 YEATS4O95619 227 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 FSIP1Q8NA03 581 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
SPG11-210ENST00000558319 CFTRP13569 1480 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 HSPA4P34932 840 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 HOOK3Q86VS8 718 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 FAM83GA6ND36 823 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 CLGNO14967 610 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 CTNNA2P26232 953 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 IFIT5Q13325 482 aaKnown RBP16.07■□□□□ 0.16
SPG11-210ENST00000558319 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 GOLGA8BA8MQT2 603 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 TSG101Q99816 390 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 POTEB2H3BUK9 544 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 CCDC6Q16204 474 aa16.07■□□□□ 0.16
SPG11-210ENST00000558319 TMPOP42166 694 aaKnown RBP16.06■□□□□ 0.16
SPG11-210ENST00000558319 NOP2P46087 812 aaKnown RBP16.06■□□□□ 0.16
SPG11-210ENST00000558319 KRT32Q14532 448 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
SPG11-210ENST00000558319 WASF1Q92558 559 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 ZNF213O14771 459 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 CUL5Q93034 780 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 GOLGA8AA7E2F4 631 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 GJC1P36383 396 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
SPG11-210ENST00000558319 GIMAP6Q6P9H5 292 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 CEP112Q8N8E3 955 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 IDEP14735 1019 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 MX1P20591 662 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
SPG11-210ENST00000558319 C10orf67Q8IYJ2 551 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 C8orf76Q96K31 380 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 HOMER2Q9NSB8 354 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 PRC1O43663 620 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 PLS1Q14651 629 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 APBB1IPQ7Z5R6 666 aaPredicted RBP16.05■□□□□ 0.16
SPG11-210ENST00000558319 BICD1Q96G01 975 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 PPP1R12BO60237 982 aaPredicted RBP16.05■□□□□ 0.16
SPG11-210ENST00000558319 MSL1Q68DK7 614 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 ALS2CR12Q96Q35 445 aa16.05■□□□□ 0.16
SPG11-210ENST00000558319 SCAND2PQ9GZW5 306 aaPredicted RBP16.05■□□□□ 0.16
SPG11-210ENST00000558319 MYO1BO43795 1136 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 MICU3Q86XE3 530 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 NAA15Q9BXJ9 866 aaKnown RBP16.04■□□□□ 0.16
SPG11-210ENST00000558319 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
SPG11-210ENST00000558319 ATRIPQ8WXE1 791 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 TTC31Q49AM3 519 aaPredicted RBP16.04■□□□□ 0.16
SPG11-210ENST00000558319 SYCP3Q8IZU3 236 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 PAXBP1Q9Y5B6 917 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 A0A087WZG4 1122 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 GSDMDP57764 484 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 MXRA7P84157 204 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 C6orf163Q5TEZ5 329 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 PRIMPOLQ96LW4 560 aa16.04■□□□□ 0.16
SPG11-210ENST00000558319 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
SPG11-210ENST00000558319 MTIF2P46199 727 aaKnown RBP16.03■□□□□ 0.16
SPG11-210ENST00000558319 STX1AQ16623 288 aa16.03■□□□□ 0.16
SPG11-210ENST00000558319 SLC5A1P13866 664 aa16.03■□□□□ 0.16
SPG11-210ENST00000558319 GJB2P29033 226 aa16.03■□□□□ 0.16
SPG11-210ENST00000558319 ARL1P40616 181 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms