RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 PDE6BP35913 854 aa21.31■■□□□ 1
AC027088.1-201ENST00000557966 NEUROD2Q15784 382 aa21.31■■□□□ 1
AC027088.1-201ENST00000557966 NGEFQ8N5V2 710 aa21.31■■□□□ 1
AC027088.1-201ENST00000557966 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
AC027088.1-201ENST00000557966 NIP7Q9Y221 180 aaKnown RBP eCLIP21.3■■□□□ 1
AC027088.1-201ENST00000557966 KIF3CO14782 793 aa21.29■■□□□ 1
AC027088.1-201ENST00000557966 MYL6BP14649 208 aa21.29■■□□□ 1
AC027088.1-201ENST00000557966 PRELPP51888 382 aa21.29■■□□□ 1
AC027088.1-201ENST00000557966 ST5P78524 1137 aa21.29■■□□□ 1
AC027088.1-201ENST00000557966 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
AC027088.1-201ENST00000557966 ZNF622Q969S3 477 aaKnown RBP eCLIP21.29■■□□□ 1
AC027088.1-201ENST00000557966 RNF181Q9P0P0 153 aa21.29■■□□□ 1
AC027088.1-201ENST00000557966 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
AC027088.1-201ENST00000557966 NPHP1O15259 732 aa21.28■■□□□ 1
AC027088.1-201ENST00000557966 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
AC027088.1-201ENST00000557966 NBPF5PQ86XG9 351 aaPredicted RBP21.28■■□□□ 1
AC027088.1-201ENST00000557966 BABAM1Q9NWV8 329 aa21.28■■□□□ 1
AC027088.1-201ENST00000557966 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
AC027088.1-201ENST00000557966 SBF1O95248 1867 aa21.28■■□□□ 1
AC027088.1-201ENST00000557966 MAP3K15Q6ZN16 1313 aa21.28■■□□□ 1
AC027088.1-201ENST00000557966 LRP10Q7Z4F1 713 aa21.27■■□□□ 1
AC027088.1-201ENST00000557966 ERBB4Q15303 1308 aa21.27■□□□□ 0.99
AC027088.1-201ENST00000557966 TNRC6CQ9HCJ0 1690 aaKnown RBP21.26■□□□□ 0.99
AC027088.1-201ENST00000557966 FAM177BA6PVY3 158 aa21.26■□□□□ 0.99
AC027088.1-201ENST00000557966 NFKBIEO00221 500 aa21.26■□□□□ 0.99
AC027088.1-201ENST00000557966 ARFGEF2Q9Y6D5 1785 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 ERVV-1B6SEH8 477 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 SRGNP10124 158 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 PDIA6Q15084 440 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 KRT24Q2M2I5 525 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 ZBTB3Q9H5J0 574 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 NUP98P52948 1817 aa21.25■□□□□ 0.99
AC027088.1-201ENST00000557966 CACNA1SQ13698 1873 aa21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 CHL1O00533 1208 aa21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 EIF2S2P20042 333 aaKnown RBP21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 PROSER3Q2NL68 480 aa21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 STYK1Q6J9G0 422 aa21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 KIF6Q6ZMV9 814 aa21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 NMRK2Q9NPI5 230 aa21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 ZNF219Q9P2Y4 722 aaPredicted RBP21.24■□□□□ 0.99
AC027088.1-201ENST00000557966 ABCC12Q96J65 1359 aa21.23■□□□□ 0.99
AC027088.1-201ENST00000557966 SLX4Q8IY92 1834 aa21.23■□□□□ 0.99
AC027088.1-201ENST00000557966 C21orf2O43822 256 aa21.23■□□□□ 0.99
AC027088.1-201ENST00000557966 ANXA1P04083 346 aa21.23■□□□□ 0.99
AC027088.1-201ENST00000557966 TIAM2Q8IVF5 1701 aa21.23■□□□□ 0.99
AC027088.1-201ENST00000557966 UBN2Q6ZU65 1347 aa21.23■□□□□ 0.99
AC027088.1-201ENST00000557966 CCDC184Q52MB2 194 aa21.22■□□□□ 0.99
AC027088.1-201ENST00000557966 PRPF40BQ6NWY9 871 aaKnown RBP21.22■□□□□ 0.99
AC027088.1-201ENST00000557966 TPTE2Q6XPS3 522 aa21.22■□□□□ 0.99
AC027088.1-201ENST00000557966 MASTLQ96GX5 879 aa21.22■□□□□ 0.99
AC027088.1-201ENST00000557966 LAS1LQ9Y4W2 734 aaKnown RBP21.22■□□□□ 0.99
AC027088.1-201ENST00000557966 KLRG2A4D1S0 409 aaPredicted RBP21.21■□□□□ 0.99
AC027088.1-201ENST00000557966 LMNB1P20700 586 aa21.21■□□□□ 0.99
AC027088.1-201ENST00000557966 NECTIN2Q92692 538 aa21.21■□□□□ 0.99
AC027088.1-201ENST00000557966 CNKSR1Q969H4 720 aa21.21■□□□□ 0.99
AC027088.1-201ENST00000557966 FER1L6Q2WGJ9 1857 aa21.21■□□□□ 0.99
AC027088.1-201ENST00000557966 GPTP24298 496 aa21.2■□□□□ 0.98
AC027088.1-201ENST00000557966 NUTM1Q86Y26 1132 aa21.2■□□□□ 0.98
AC027088.1-201ENST00000557966 IBTKQ9P2D0 1353 aaPredicted RBP21.2■□□□□ 0.98
AC027088.1-201ENST00000557966 APAF1O14727 1248 aa21.19■□□□□ 0.98
AC027088.1-201ENST00000557966 GIGYF2Q6Y7W6 1299 aaKnown RBP21.19■□□□□ 0.98
AC027088.1-201ENST00000557966 NPR1P16066 1061 aa21.18■□□□□ 0.98
AC027088.1-201ENST00000557966 ZNF34Q8IZ26 560 aa21.18■□□□□ 0.98
AC027088.1-201ENST00000557966 ZC3H4Q9UPT8 1303 aaKnown RBP21.18■□□□□ 0.98
AC027088.1-201ENST00000557966 ERFEQ4G0M1 354 aa21.17■□□□□ 0.98
AC027088.1-201ENST00000557966 SUSD4Q5VX71 490 aa21.17■□□□□ 0.98
AC027088.1-201ENST00000557966 NYXQ9GZU5 481 aa21.17■□□□□ 0.98
AC027088.1-201ENST00000557966 RIC1Q4ADV7 1423 aa21.17■□□□□ 0.98
AC027088.1-201ENST00000557966 CCDC88AQ3V6T2 1871 aa21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 ZNF316A6NFI3 1004 aaPredicted RBP21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 NTSR2O95665 410 aa21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 GTF2E1P29083 439 aaPredicted RBP21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 C7orf43Q8WVR3 580 aa21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 CFAP44Q96MT7 982 aa21.16■□□□□ 0.98
AC027088.1-201ENST00000557966 KDM2BQ8NHM5 1336 aa21.15■□□□□ 0.98
AC027088.1-201ENST00000557966 COPS6Q7L5N1 327 aa21.15■□□□□ 0.98
AC027088.1-201ENST00000557966 XAGE3Q8WTP9 111 aa21.15■□□□□ 0.98
AC027088.1-201ENST00000557966 MBIPQ9NS73 344 aa21.15■□□□□ 0.98
AC027088.1-201ENST00000557966 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
AC027088.1-201ENST00000557966 TOMM70O94826 608 aa21.14■□□□□ 0.97
AC027088.1-201ENST00000557966 ZNF853P0CG23 659 aa21.14■□□□□ 0.97
AC027088.1-201ENST00000557966 CRY2Q49AN0 593 aa21.14■□□□□ 0.97
AC027088.1-201ENST00000557966 TAOK3Q9H2K8 898 aa21.14■□□□□ 0.97
AC027088.1-201ENST00000557966 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
AC027088.1-201ENST00000557966 CHPF2Q9P2E5 772 aa21.14■□□□□ 0.97
AC027088.1-201ENST00000557966 HSPA6P17066 643 aa21.13■□□□□ 0.97
AC027088.1-201ENST00000557966 AIMP1Q12904 312 aaKnown RBP21.13■□□□□ 0.97
AC027088.1-201ENST00000557966 HDGFL1Q5TGJ6 251 aa21.13■□□□□ 0.97
AC027088.1-201ENST00000557966 OLFM4Q6UX06 510 aa21.13■□□□□ 0.97
AC027088.1-201ENST00000557966 RRAGCQ9HB90 399 aa21.13■□□□□ 0.97
AC027088.1-201ENST00000557966 HOXB7P09629 217 aa21.12■□□□□ 0.97
AC027088.1-201ENST00000557966 SOGA3Q5TF21 947 aa21.12■□□□□ 0.97
AC027088.1-201ENST00000557966 C3orf67Q6ZVT6 689 aa21.12■□□□□ 0.97
AC027088.1-201ENST00000557966 SNED1Q8TER0 1413 aa21.12■□□□□ 0.97
AC027088.1-201ENST00000557966 DICER1Q9UPY3 1922 aaKnown RBP21.12■□□□□ 0.97
AC027088.1-201ENST00000557966 GLTPD2A6NH11 291 aa21.11■□□□□ 0.97
AC027088.1-201ENST00000557966 PARP10Q53GL7 1025 aa21.11■□□□□ 0.97
AC027088.1-201ENST00000557966 CCDC93Q567U6 631 aa21.11■□□□□ 0.97
AC027088.1-201ENST00000557966 DUSP27Q5VZP5 1158 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms