RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 STARD3NLO95772 234 aa15.14■□□□□ 0.01
LINC00648-204ENST00000557749 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
LINC00648-204ENST00000557749 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
LINC00648-204ENST00000557749 CEMIPQ8WUJ3 1361 aa15.13■□□□□ 0.01
LINC00648-204ENST00000557749 GRIN3BO60391 1043 aa15.13■□□□□ 0.01
LINC00648-204ENST00000557749 GPR162Q16538 588 aa15.13■□□□□ 0.01
LINC00648-204ENST00000557749 SLC4A9Q96Q91 983 aa15.13■□□□□ 0.01
LINC00648-204ENST00000557749 YY1P25490 414 aa15.12■□□□□ 0.01
LINC00648-204ENST00000557749 CCDC87Q9NVE4 849 aa15.12■□□□□ 0.01
LINC00648-204ENST00000557749 ZNF790Q6PG37 636 aa15.11■□□□□ 0.01
LINC00648-204ENST00000557749 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
LINC00648-204ENST00000557749 ARHGEF1Q92888 912 aaKnown RBP15.11■□□□□ 0.01
LINC00648-204ENST00000557749 FMNL2Q96PY5 1086 aa15.11■□□□□ 0.01
LINC00648-204ENST00000557749 TJP1Q07157 1748 aa15.11■□□□□ 0.01
LINC00648-204ENST00000557749 MAPK8IP3Q9UPT6 1336 aa15.11■□□□□ 0.01
LINC00648-204ENST00000557749 ZPR1O75312 459 aa15.1■□□□□ 0.01
LINC00648-204ENST00000557749 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
LINC00648-204ENST00000557749 KCPQ6ZWJ8 1503 aa15.1■□□□□ 0.01
LINC00648-204ENST00000557749 UBR2Q8IWV8 1755 aa15.1■□□□□ 0.01
LINC00648-204ENST00000557749 MYBBP1AQ9BQG0 1328 aaKnown RBP15.1■□□□□ 0.01
LINC00648-204ENST00000557749 A0A087WZG4 1122 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 BTBD11A6QL63 1104 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 KIF3CO14782 793 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 MMP10P09238 476 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 DDX10Q13206 875 aaKnown RBP15.09■□□□□ 0.01
LINC00648-204ENST00000557749 SLC39A6Q13433 755 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 PNISRQ8TF01 805 aaKnown RBP15.09■□□□□ 0.01
LINC00648-204ENST00000557749 PHACTR3Q96KR7 559 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 PARP3Q9Y6F1 533 aa15.09■□□□□ 0.01
LINC00648-204ENST00000557749 USP42Q9H9J4 1324 aaKnown RBP15.09■□□□□ 0.01
LINC00648-204ENST00000557749 CYP19A1P11511 503 aaPredicted RBP15.08■□□□□ 0
LINC00648-204ENST00000557749 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
LINC00648-204ENST00000557749 HEG1Q9ULI3 1381 aa15.08■□□□□ 0
LINC00648-204ENST00000557749 MYH14Q7Z406 1995 aaKnown RBP15.07■□□□□ 0
LINC00648-204ENST00000557749 SIPA1L3O60292 1781 aaPredicted RBP15.07■□□□□ 0
LINC00648-204ENST00000557749 GYS1P13807 737 aa15.07■□□□□ 0
LINC00648-204ENST00000557749 TGFB2P61812 414 aa15.07■□□□□ 0
LINC00648-204ENST00000557749 INTS5Q6P9B9 1019 aaKnown RBP15.07■□□□□ 0
LINC00648-204ENST00000557749 CRISPLD2Q9H0B8 497 aa15.07■□□□□ 0
LINC00648-204ENST00000557749 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
LINC00648-204ENST00000557749 CHD4Q14839 1912 aa15.07■□□□□ 0
LINC00648-204ENST00000557749 C4AP0C0L4 1744 aa15.06■□□□□ 0
LINC00648-204ENST00000557749 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
LINC00648-204ENST00000557749 COL15A1P39059 1388 aa15.06■□□□□ 0
LINC00648-204ENST00000557749 NLGN2Q8NFZ4 835 aa15.05■□□□□ -0
LINC00648-204ENST00000557749 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
LINC00648-204ENST00000557749 G3V3G9 751 aa15.04■□□□□ -0
LINC00648-204ENST00000557749 IL6STP40189 918 aaPredicted RBP15.04■□□□□ -0
LINC00648-204ENST00000557749 WDR43Q15061 677 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00648-204ENST00000557749 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
LINC00648-204ENST00000557749 NFE2L2Q16236 605 aa15.04■□□□□ -0
LINC00648-204ENST00000557749 NARFQ9UHQ1 456 aa15.04■□□□□ -0
LINC00648-204ENST00000557749 C10orf71Q711Q0 1435 aa15.03■□□□□ -0
LINC00648-204ENST00000557749 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
LINC00648-204ENST00000557749 C3orf67Q6ZVT6 689 aa15.03■□□□□ -0
LINC00648-204ENST00000557749 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.03■□□□□ -0
LINC00648-204ENST00000557749 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
LINC00648-204ENST00000557749 KIF13BQ9NQT8 1826 aa15.02■□□□□ -0
LINC00648-204ENST00000557749 C2orf72A6NCS6 295 aa15.02■□□□□ -0
LINC00648-204ENST00000557749 MAMSTRQ6ZN01 415 aa15.02■□□□□ -0
LINC00648-204ENST00000557749 SMIM5Q71RC9 77 aa15.02■□□□□ -0
LINC00648-204ENST00000557749 MCM10Q7L590 875 aa15.02■□□□□ -0
LINC00648-204ENST00000557749 PLEKHF1Q96S99 279 aa15.02■□□□□ -0
LINC00648-204ENST00000557749 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
LINC00648-204ENST00000557749 EIF5P55010 431 aaKnown RBP15.01□□□□□ -0.01
LINC00648-204ENST00000557749 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
LINC00648-204ENST00000557749 SCUBE2Q9NQ36 999 aa15□□□□□ -0.01
LINC00648-204ENST00000557749 GPHNQ9NQX3 736 aaPredicted RBP15□□□□□ -0.01
LINC00648-204ENST00000557749 BABAM1Q9NWV8 329 aa15□□□□□ -0.01
LINC00648-204ENST00000557749 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
LINC00648-204ENST00000557749 SRP68Q9UHB9 627 aaKnown RBP14.99□□□□□ -0.01
LINC00648-204ENST00000557749 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
LINC00648-204ENST00000557749 ZNF652Q9Y2D9 606 aa14.99□□□□□ -0.01
LINC00648-204ENST00000557749 PXDNLA1KZ92 1463 aa14.98□□□□□ -0.01
LINC00648-204ENST00000557749 POLRMTO00411 1230 aaKnown RBP14.97□□□□□ -0.01
LINC00648-204ENST00000557749 YBX3P16989 372 aaKnown RBP eCLIP14.97□□□□□ -0.01
LINC00648-204ENST00000557749 TM4SF1P30408 202 aa14.97□□□□□ -0.01
LINC00648-204ENST00000557749 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
LINC00648-204ENST00000557749 ZNF330Q9Y3S2 320 aaPredicted RBP14.97□□□□□ -0.01
LINC00648-204ENST00000557749 DLG5Q8TDM6 1919 aa14.96□□□□□ -0.01
LINC00648-204ENST00000557749 RIPK4P57078 832 aa14.96□□□□□ -0.01
LINC00648-204ENST00000557749 DCTN1Q14203 1278 aa14.96□□□□□ -0.01
LINC00648-204ENST00000557749 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
LINC00648-204ENST00000557749 PIM2Q9P1W9 311 aa14.96□□□□□ -0.01
LINC00648-204ENST00000557749 CARMIL3Q8ND23 1372 aa14.96□□□□□ -0.02
LINC00648-204ENST00000557749 DDR1Q08345 913 aa14.95□□□□□ -0.02
LINC00648-204ENST00000557749 MFSD10Q14728 455 aa14.95□□□□□ -0.02
LINC00648-204ENST00000557749 NFIXQ14938 502 aa14.95□□□□□ -0.02
LINC00648-204ENST00000557749 CLEC4GQ6UXB4 293 aa14.95□□□□□ -0.02
LINC00648-204ENST00000557749 SCN7AQ01118 1682 aa14.95□□□□□ -0.02
LINC00648-204ENST00000557749 ERBB4Q15303 1308 aa14.94□□□□□ -0.02
LINC00648-204ENST00000557749 LAMB4A4D0S4 1761 aa14.94□□□□□ -0.02
LINC00648-204ENST00000557749 TMPOP42166 694 aaKnown RBP14.94□□□□□ -0.02
LINC00648-204ENST00000557749 DSG2Q14126 1118 aa14.94□□□□□ -0.02
LINC00648-204ENST00000557749 DZIP3Q86Y13 1208 aaKnown RBP14.94□□□□□ -0.02
LINC00648-204ENST00000557749 ZNF784Q8NCA9 323 aaPredicted RBP14.94□□□□□ -0.02
LINC00648-204ENST00000557749 UTRNP46939 3433 aa14.94□□□□□ -0.02
LINC00648-204ENST00000557749 KDM3BQ7LBC6 1761 aa14.93□□□□□ -0.02
LINC00648-204ENST00000557749 NPHP1O15259 732 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms