RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 C7orf43Q8WVR3 580 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 ZFP42Q96MM3 310 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 ATP13A2Q9NQ11 1180 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 CCDC87Q9NVE4 849 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 ZDHHC3Q9NYG2 299 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 BCS1LQ9Y276 419 aa7.94□□□□□ -1.14
PRPF39-212ENST00000557477 POTECB2RU33 542 aa7.93□□□□□ -1.14
PRPF39-212ENST00000557477 FZD6O60353 706 aa7.93□□□□□ -1.14
PRPF39-212ENST00000557477 BRD2P25440 801 aaKnown RBP7.93□□□□□ -1.14
PRPF39-212ENST00000557477 RBM25P49756 843 aaKnown RBP7.93□□□□□ -1.14
PRPF39-212ENST00000557477 NPAS4Q8IUM7 802 aa7.93□□□□□ -1.14
PRPF39-212ENST00000557477 ABTB2Q8N961 1025 aa7.93□□□□□ -1.14
PRPF39-212ENST00000557477 RHPN1Q8TCX5 695 aa7.93□□□□□ -1.14
PRPF39-212ENST00000557477 IFT43Q96FT9 208 aa7.93□□□□□ -1.14
PRPF39-212ENST00000557477 AAMPQ13685 434 aa7.92□□□□□ -1.14
PRPF39-212ENST00000557477 HSH2DQ96JZ2 352 aa7.92□□□□□ -1.14
PRPF39-212ENST00000557477 ASB16Q96NS5 453 aa7.92□□□□□ -1.14
PRPF39-212ENST00000557477 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
PRPF39-212ENST00000557477 AMOTL2Q9Y2J4 779 aa7.92□□□□□ -1.14
PRPF39-212ENST00000557477 TATP17735 454 aaPredicted RBP7.91□□□□□ -1.14
PRPF39-212ENST00000557477 ERCC3P19447 782 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 ZAP70P43403 619 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 ALKBH2Q6NS38 261 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 RBCK1Q9BYM8 510 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 TIMMDC1Q9NPL8 285 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
PRPF39-212ENST00000557477 NDUFB5O43674 189 aa7.9□□□□□ -1.14
PRPF39-212ENST00000557477 WDR44Q5JSH3 913 aa7.9□□□□□ -1.14
PRPF39-212ENST00000557477 TMC7Q7Z402 723 aa7.9□□□□□ -1.14
PRPF39-212ENST00000557477 TREML1Q86YW5 311 aa7.9□□□□□ -1.14
PRPF39-212ENST00000557477 RGL4Q8IZJ4 473 aa7.9□□□□□ -1.14
PRPF39-212ENST00000557477 SUSD3Q96L08 255 aa7.9□□□□□ -1.14
PRPF39-212ENST00000557477 A0A1B0GTH6 734 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 TGFBR3LH3BV60 316 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 MSX1P28360 303 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 ZNF787Q6DD87 383 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 BICDL1Q6ZP65 573 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 ZSCAN29Q8IWY8 852 aaPredicted RBP7.89□□□□□ -1.15
PRPF39-212ENST00000557477 EDEM1Q92611 657 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 POLIQ9UNA4 740 aa7.89□□□□□ -1.15
PRPF39-212ENST00000557477 MAN1A2O60476 641 aa7.88□□□□□ -1.15
PRPF39-212ENST00000557477 DNM1Q05193 864 aaKnown RBP7.88□□□□□ -1.15
PRPF39-212ENST00000557477 ARSJQ5FYB0 599 aaPredicted RBP7.88□□□□□ -1.15
PRPF39-212ENST00000557477 ZIC5Q96T25 663 aa7.88□□□□□ -1.15
PRPF39-212ENST00000557477 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
PRPF39-212ENST00000557477 SENP2Q9HC62 589 aa7.88□□□□□ -1.15
PRPF39-212ENST00000557477 GPAMQ9HCL2 828 aa7.88□□□□□ -1.15
PRPF39-212ENST00000557477 DMGDHQ9UI17 866 aaKnown RBP7.88□□□□□ -1.15
PRPF39-212ENST00000557477 RBM47A0AV96 593 aaKnown RBP7.87□□□□□ -1.15
PRPF39-212ENST00000557477 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
PRPF39-212ENST00000557477 MICAL2O94851 1124 aa7.87□□□□□ -1.15
PRPF39-212ENST00000557477 IGHA2P01877 340 aa7.87□□□□□ -1.15
PRPF39-212ENST00000557477 PDGFAP04085 211 aa7.87□□□□□ -1.15
PRPF39-212ENST00000557477 LRRC69Q6ZNQ3 347 aa7.87□□□□□ -1.15
PRPF39-212ENST00000557477 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
PRPF39-212ENST00000557477 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
PRPF39-212ENST00000557477 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 UNCXA6NJT0 531 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 GPR182O15218 404 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 MZF1P28698 734 aaPredicted RBP7.86□□□□□ -1.15
PRPF39-212ENST00000557477 RANGAP1P46060 587 aaPredicted RBP7.86□□□□□ -1.15
PRPF39-212ENST00000557477 IER5Q5VY09 327 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 FBXO33Q7Z6M2 555 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 TMC1Q8TDI8 760 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 GPR152Q8TDT2 470 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 GIPC2Q8TF65 315 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 KIFC2Q96AC6 838 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 FAM129BQ96TA1 746 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 RUBCNLQ9H714 662 aa7.86□□□□□ -1.15
PRPF39-212ENST00000557477 A0A1W2PNR3 127 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 OPLAHO14841 1288 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 TREHO43280 583 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 P4HBP07237 508 aaKnown RBP7.85□□□□□ -1.15
PRPF39-212ENST00000557477 ZNF16P17020 682 aaPredicted RBP7.85□□□□□ -1.15
PRPF39-212ENST00000557477 IDH3AP50213 366 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 TAGLNQ01995 201 aaKnown RBP7.85□□□□□ -1.15
PRPF39-212ENST00000557477 HIF1AQ16665 826 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.85□□□□□ -1.15
PRPF39-212ENST00000557477 GJD3Q8N144 294 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 USP20Q9Y2K6 914 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 DYRK1BQ9Y463 629 aa7.85□□□□□ -1.15
PRPF39-212ENST00000557477 BTLAQ7Z6A9 289 aa7.84□□□□□ -1.15
PRPF39-212ENST00000557477 NUDT16Q96DE0 195 aaKnown RBP7.84□□□□□ -1.15
PRPF39-212ENST00000557477 GAS2L1Q99501 681 aaPredicted RBP7.84□□□□□ -1.15
PRPF39-212ENST00000557477 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
PRPF39-212ENST00000557477 A6NHS1 94 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
PRPF39-212ENST00000557477 F11P03951 625 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 INPP5BP32019 993 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 FMR1Q06787 632 aaKnown RBP eCLIP7.83□□□□□ -1.16
PRPF39-212ENST00000557477 DSC3Q14574 896 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 TRIM47Q96LD4 638 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 DMRTB1Q96MA1 342 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 NEUROD4Q9HD90 331 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 ANKIB1Q9P2G1 1089 aa7.83□□□□□ -1.16
PRPF39-212ENST00000557477 SNRPBP14678 240 aaKnown RBP7.82□□□□□ -1.16
PRPF39-212ENST00000557477 GRNP28799 593 aaKnown RBP7.82□□□□□ -1.16
PRPF39-212ENST00000557477 TYRO3Q06418 890 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms