RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 KIF6Q6ZMV9 814 aa25.65■■□□□ 1.7
HIF1A-211ENST00000557446 TTLL7Q6ZT98 887 aa25.65■■□□□ 1.7
HIF1A-211ENST00000557446 WWC3Q9ULE0 1092 aa25.65■■□□□ 1.7
HIF1A-211ENST00000557446 ANKRD31Q8N7Z5 1873 aa25.64■■□□□ 1.7
HIF1A-211ENST00000557446 RGL2O15211 777 aa25.64■■□□□ 1.7
HIF1A-211ENST00000557446 YBX3P16989 372 aaKnown RBP eCLIP25.64■■□□□ 1.7
HIF1A-211ENST00000557446 DIEXFQ68CQ4 756 aaKnown RBP25.64■■□□□ 1.7
HIF1A-211ENST00000557446 LRP10Q7Z4F1 713 aa25.64■■□□□ 1.7
HIF1A-211ENST00000557446 SETDB2Q96T68 719 aa25.64■■□□□ 1.7
HIF1A-211ENST00000557446 MAP3K15Q6ZN16 1313 aa25.63■■□□□ 1.69
HIF1A-211ENST00000557446 DLEC1Q9Y238 1755 aa25.63■■□□□ 1.69
HIF1A-211ENST00000557446 CHD4Q14839 1912 aa25.63■■□□□ 1.69
HIF1A-211ENST00000557446 IL16Q14005 1332 aa25.63■■□□□ 1.69
HIF1A-211ENST00000557446 A0A0G2JLW4 131 aa25.62■■□□□ 1.69
HIF1A-211ENST00000557446 DPEP1P16444 411 aa25.62■■□□□ 1.69
HIF1A-211ENST00000557446 HLFQ16534 295 aa25.62■■□□□ 1.69
HIF1A-211ENST00000557446 TSR2Q969E8 191 aaKnown RBP25.62■■□□□ 1.69
HIF1A-211ENST00000557446 ERVV-1B6SEH8 477 aa25.61■■□□□ 1.69
HIF1A-211ENST00000557446 ZBTB3Q9H5J0 574 aa25.61■■□□□ 1.69
HIF1A-211ENST00000557446 DDX21Q9NR30 783 aaKnown RBP eCLIP25.61■■□□□ 1.69
HIF1A-211ENST00000557446 CHPF2Q9P2E5 772 aa25.61■■□□□ 1.69
HIF1A-211ENST00000557446 ANKRD36CQ5JPF3 1778 aa25.61■■□□□ 1.69
HIF1A-211ENST00000557446 ELL2O00472 640 aaPredicted RBP25.6■■□□□ 1.69
HIF1A-211ENST00000557446 NIP7Q9Y221 180 aaKnown RBP eCLIP25.6■■□□□ 1.69
HIF1A-211ENST00000557446 ATP10DQ9P241 1426 aa25.6■■□□□ 1.69
HIF1A-211ENST00000557446 NPHP1O15259 732 aa25.59■■□□□ 1.69
HIF1A-211ENST00000557446 PRR5LQ6MZQ0 368 aa25.59■■□□□ 1.69
HIF1A-211ENST00000557446 WDR63Q8IWG1 891 aa25.59■■□□□ 1.69
HIF1A-211ENST00000557446 C8orf58Q8NAV2 365 aa25.59■■□□□ 1.69
HIF1A-211ENST00000557446 COL11A2P13942 1736 aaPredicted RBP25.58■■□□□ 1.69
HIF1A-211ENST00000557446 CNBD1Q8NA66 436 aa25.58■■□□□ 1.69
HIF1A-211ENST00000557446 CHRNA5P30532 468 aa25.57■■□□□ 1.68
HIF1A-211ENST00000557446 COPS6Q7L5N1 327 aa25.57■■□□□ 1.68
HIF1A-211ENST00000557446 XAGE3Q8WTP9 111 aa25.57■■□□□ 1.68
HIF1A-211ENST00000557446 DBF4Q9UBU7 674 aaPredicted RBP25.57■■□□□ 1.68
HIF1A-211ENST00000557446 ARFGEF1Q9Y6D6 1849 aa25.57■■□□□ 1.68
HIF1A-211ENST00000557446 GRIN3BO60391 1043 aa25.56■■□□□ 1.68
HIF1A-211ENST00000557446 AIMP1Q12904 312 aaKnown RBP25.56■■□□□ 1.68
HIF1A-211ENST00000557446 NBPF5PQ86XG9 351 aaPredicted RBP25.56■■□□□ 1.68
HIF1A-211ENST00000557446 CCDC24Q8N4L8 307 aa25.56■■□□□ 1.68
HIF1A-211ENST00000557446 FANCIQ9NVI1 1328 aa25.56■■□□□ 1.68
HIF1A-211ENST00000557446 KCNA3P22001 575 aa25.55■■□□□ 1.68
HIF1A-211ENST00000557446 ST5P78524 1137 aa25.55■■□□□ 1.68
HIF1A-211ENST00000557446 GIGYF2Q6Y7W6 1299 aaKnown RBP25.55■■□□□ 1.68
HIF1A-211ENST00000557446 TSPYL6Q8N831 410 aa25.55■■□□□ 1.68
HIF1A-211ENST00000557446 BCS1LQ9Y276 419 aa25.54■■□□□ 1.68
HIF1A-211ENST00000557446 ARFGEF2Q9Y6D5 1785 aa25.54■■□□□ 1.68
HIF1A-211ENST00000557446 FAM177BA6PVY3 158 aa25.53■■□□□ 1.68
HIF1A-211ENST00000557446 PIM2Q9P1W9 311 aa25.53■■□□□ 1.68
HIF1A-211ENST00000557446 GPTP24298 496 aa25.52■■□□□ 1.68
HIF1A-211ENST00000557446 MIER1Q8N108 512 aa25.52■■□□□ 1.68
HIF1A-211ENST00000557446 BRIP1Q9BX63 1249 aa25.52■■□□□ 1.68
HIF1A-211ENST00000557446 HYPKQ9NX55 129 aa25.52■■□□□ 1.68
HIF1A-211ENST00000557446 UBN2Q6ZU65 1347 aa25.52■■□□□ 1.68
HIF1A-211ENST00000557446 YY1P25490 414 aa25.51■■□□□ 1.67
HIF1A-211ENST00000557446 TWISTNBQ3B726 338 aaPredicted RBP25.51■■□□□ 1.67
HIF1A-211ENST00000557446 C2CD5Q86YS7 1000 aa25.51■■□□□ 1.67
HIF1A-211ENST00000557446 CACNA1SQ13698 1873 aa25.51■■□□□ 1.67
HIF1A-211ENST00000557446 PDE6BP35913 854 aa25.5■■□□□ 1.67
HIF1A-211ENST00000557446 GOLGB1Q14789 3259 aaKnown RBP25.5■■□□□ 1.67
HIF1A-211ENST00000557446 CCDC30Q5VVM6 783 aa25.5■■□□□ 1.67
HIF1A-211ENST00000557446 TPTE2Q6XPS3 522 aa25.5■■□□□ 1.67
HIF1A-211ENST00000557446 ZNF521Q96K83 1311 aa25.5■■□□□ 1.67
HIF1A-211ENST00000557446 TNRC6CQ9HCJ0 1690 aaKnown RBP25.5■■□□□ 1.67
HIF1A-211ENST00000557446 SPINK5Q9NQ38 1064 aaPredicted RBP25.5■■□□□ 1.67
HIF1A-211ENST00000557446 IBTKQ9P2D0 1353 aaPredicted RBP25.5■■□□□ 1.67
HIF1A-211ENST00000557446 H0YIN7 160 aa25.49■■□□□ 1.67
HIF1A-211ENST00000557446 ZNF34Q8IZ26 560 aa25.49■■□□□ 1.67
HIF1A-211ENST00000557446 CHMP4AQ9BY43 222 aa25.49■■□□□ 1.67
HIF1A-211ENST00000557446 GOLGA2Q08379 1002 aa25.48■■□□□ 1.67
HIF1A-211ENST00000557446 HSP90AB3PQ58FF7 597 aa25.48■■□□□ 1.67
HIF1A-211ENST00000557446 DALRD3Q5D0E6 543 aaKnown RBP25.48■■□□□ 1.67
HIF1A-211ENST00000557446 NYXQ9GZU5 481 aa25.48■■□□□ 1.67
HIF1A-211ENST00000557446 MYH16Q9H6N6 1097 aa25.48■■□□□ 1.67
HIF1A-211ENST00000557446 PDZRN3Q9UPQ7 1066 aa25.48■■□□□ 1.67
HIF1A-211ENST00000557446 GTF2E1P29083 439 aaPredicted RBP25.47■■□□□ 1.67
HIF1A-211ENST00000557446 PLBD2Q8NHP8 589 aa25.47■■□□□ 1.67
HIF1A-211ENST00000557446 ABCC12Q96J65 1359 aa25.46■■□□□ 1.67
HIF1A-211ENST00000557446 PARP10Q53GL7 1025 aa25.46■■□□□ 1.67
HIF1A-211ENST00000557446 SUSD4Q5VX71 490 aa25.46■■□□□ 1.67
HIF1A-211ENST00000557446 PHAXQ9H814 394 aaKnown RBP25.46■■□□□ 1.67
HIF1A-211ENST00000557446 UTRNP46939 3433 aa25.46■■□□□ 1.67
HIF1A-211ENST00000557446 EXOSC9Q06265 439 aaKnown RBP25.45■■□□□ 1.66
HIF1A-211ENST00000557446 ANKRD13DQ6ZTN6 518 aa25.45■■□□□ 1.66
HIF1A-211ENST00000557446 NUTM1Q86Y26 1132 aa25.45■■□□□ 1.66
HIF1A-211ENST00000557446 NTSR2O95665 410 aa25.44■■□□□ 1.66
HIF1A-211ENST00000557446 TCIRG1Q13488 830 aa25.44■■□□□ 1.66
HIF1A-211ENST00000557446 STK31Q9BXU1 1019 aa25.44■■□□□ 1.66
HIF1A-211ENST00000557446 TCERG1O14776 1098 aaKnown RBP25.43■■□□□ 1.66
HIF1A-211ENST00000557446 PPP1R42Q7Z4L9 355 aa25.43■■□□□ 1.66
HIF1A-211ENST00000557446 TTLL6Q8N841 843 aa25.43■■□□□ 1.66
HIF1A-211ENST00000557446 ZNF622Q969S3 477 aaKnown RBP eCLIP25.43■■□□□ 1.66
HIF1A-211ENST00000557446 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
HIF1A-211ENST00000557446 ERFEQ4G0M1 354 aa25.42■■□□□ 1.66
HIF1A-211ENST00000557446 RIC1Q4ADV7 1423 aa25.42■■□□□ 1.66
HIF1A-211ENST00000557446 SRGNP10124 158 aa25.41■■□□□ 1.66
HIF1A-211ENST00000557446 NLRP10Q86W26 655 aa25.41■■□□□ 1.66
HIF1A-211ENST00000557446 STYK1Q6J9G0 422 aa25.4■■□□□ 1.66
HIF1A-211ENST00000557446 ARHGAP27Q6ZUM4 889 aa25.4■■□□□ 1.66
HIF1A-211ENST00000557446 RIC3Q7Z5B4 369 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms