RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 CHPF2Q9P2E5 772 aa13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 PARP3Q9Y6F1 533 aa13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 COL11A2P13942 1736 aaPredicted RBP13.69□□□□□ -0.22
HNRNPC-232ENST00000557442 DDR1Q08345 913 aa13.68□□□□□ -0.22
HNRNPC-232ENST00000557442 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
HNRNPC-232ENST00000557442 MYH16Q9H6N6 1097 aa13.68□□□□□ -0.22
HNRNPC-232ENST00000557442 C10orf71Q711Q0 1435 aa13.68□□□□□ -0.22
HNRNPC-232ENST00000557442 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 NFIXQ14938 502 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 PDIA6Q15084 440 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 BICDL1Q6ZP65 573 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 TSPYL6Q8N831 410 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 DDX21Q9NR30 783 aaKnown RBP eCLIP13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 ZNF652Q9Y2D9 606 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 CHD4Q14839 1912 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 LAMB2P55268 1798 aa13.67□□□□□ -0.22
HNRNPC-232ENST00000557442 TWISTNBQ3B726 338 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 TTLL7Q6ZT98 887 aa13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 LRP10Q7Z4F1 713 aa13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 SYT17Q9BSW7 474 aa13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
HNRNPC-232ENST00000557442 POLRMTO00411 1230 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-232ENST00000557442 TM4SF1P30408 202 aa13.65□□□□□ -0.22
HNRNPC-232ENST00000557442 ZBTB3Q9H5J0 574 aa13.65□□□□□ -0.22
HNRNPC-232ENST00000557442 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
HNRNPC-232ENST00000557442 TNRC6CQ9HCJ0 1690 aaKnown RBP13.65□□□□□ -0.22
HNRNPC-232ENST00000557442 HNRNPUQ00839 825 aaKnown RBP eCLIP13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 EXOSC9Q06265 439 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 CCDC30Q5VVM6 783 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 NLGN2Q8NFZ4 835 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 XAGE3Q8WTP9 111 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 CD2APQ9Y5K6 639 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 MYH3P11055 1940 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 E9PSI1 815 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 RGL2O15211 777 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 HLFQ16534 295 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 COPS6Q7L5N1 327 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
HNRNPC-232ENST00000557442 PXDNLA1KZ92 1463 aa13.63□□□□□ -0.23
HNRNPC-232ENST00000557442 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
HNRNPC-232ENST00000557442 SERPINB2P05120 415 aa13.63□□□□□ -0.23
HNRNPC-232ENST00000557442 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
HNRNPC-232ENST00000557442 NIP7Q9Y221 180 aaKnown RBP eCLIP13.63□□□□□ -0.23
HNRNPC-232ENST00000557442 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
HNRNPC-232ENST00000557442 NPHP1O15259 732 aa13.62□□□□□ -0.23
HNRNPC-232ENST00000557442 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
HNRNPC-232ENST00000557442 GPTP24298 496 aa13.61□□□□□ -0.23
HNRNPC-232ENST00000557442 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
HNRNPC-232ENST00000557442 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
HNRNPC-232ENST00000557442 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
HNRNPC-232ENST00000557442 UTRNP46939 3433 aa13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 VAMP4O75379 141 aa13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 PHAXQ9H814 394 aaKnown RBP13.6□□□□□ -0.23
HNRNPC-232ENST00000557442 UBN2Q6ZU65 1347 aa13.59□□□□□ -0.23
HNRNPC-232ENST00000557442 ST5P78524 1137 aa13.59□□□□□ -0.23
HNRNPC-232ENST00000557442 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
HNRNPC-232ENST00000557442 PRR5LQ6MZQ0 368 aa13.59□□□□□ -0.23
HNRNPC-232ENST00000557442 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
HNRNPC-232ENST00000557442 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
HNRNPC-232ENST00000557442 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-232ENST00000557442 SLC4A2P04920 1241 aa13.58□□□□□ -0.24
HNRNPC-232ENST00000557442 TAF1P21675 1872 aa13.58□□□□□ -0.24
HNRNPC-232ENST00000557442 RIC3Q7Z5B4 369 aa13.58□□□□□ -0.24
HNRNPC-232ENST00000557442 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
HNRNPC-232ENST00000557442 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
HNRNPC-232ENST00000557442 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 TGFB2P61812 414 aa13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 SLX4Q8IY92 1834 aa13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 SPEF2Q9C093 1822 aa13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
HNRNPC-232ENST00000557442 ABCC12Q96J65 1359 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 A0A0G2JLW4 131 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 DPEP1P16444 411 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 GTF2E1P29083 439 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 TCIRG1Q13488 830 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 G2E3Q7L622 706 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 SBF1O95248 1867 aa13.56□□□□□ -0.24
HNRNPC-232ENST00000557442 ADCY9O60503 1353 aa13.55□□□□□ -0.24
HNRNPC-232ENST00000557442 CHRNA5P30532 468 aa13.55□□□□□ -0.24
HNRNPC-232ENST00000557442 FLIIQ13045 1269 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms