RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SUCLG2Q96I99 432 aa21.41■■□□□ 1.02
XRCC3-218ENST00000557439 TTC14Q96N46 770 aa21.41■■□□□ 1.02
XRCC3-218ENST00000557439 RPAP1Q9BWH6 1393 aaPredicted RBP21.4■■□□□ 1.02
XRCC3-218ENST00000557439 CASTP20810 708 aaKnown RBP21.4■■□□□ 1.02
XRCC3-218ENST00000557439 KIAA1211Q6ZU35 1233 aa21.4■■□□□ 1.02
XRCC3-218ENST00000557439 USP48Q86UV5 1035 aa21.4■■□□□ 1.02
XRCC3-218ENST00000557439 CLASRPQ8N2M8 674 aaKnown RBP21.4■■□□□ 1.02
XRCC3-218ENST00000557439 KAZALD1Q96I82 304 aa21.4■■□□□ 1.02
XRCC3-218ENST00000557439 CCDC8Q9H0W5 538 aaPredicted RBP21.4■■□□□ 1.02
XRCC3-218ENST00000557439 DIAPH3Q9NSV4 1193 aa21.4■■□□□ 1.02
XRCC3-218ENST00000557439 KSR2Q6VAB6 950 aa21.4■■□□□ 1.02
XRCC3-218ENST00000557439 AACSQ86V21 672 aa21.4■■□□□ 1.02
XRCC3-218ENST00000557439 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
XRCC3-218ENST00000557439 TLR7Q9NYK1 1049 aaKnown RBP21.39■■□□□ 1.01
XRCC3-218ENST00000557439 LMO7Q8WWI1 1683 aa21.39■■□□□ 1.01
XRCC3-218ENST00000557439 MYL6BP14649 208 aa21.39■■□□□ 1.01
XRCC3-218ENST00000557439 BICC1Q9H694 974 aaKnown RBP21.39■■□□□ 1.01
XRCC3-218ENST00000557439 GLRX3O76003 335 aaKnown RBP21.38■■□□□ 1.01
XRCC3-218ENST00000557439 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
XRCC3-218ENST00000557439 IL17RAQ96F46 866 aa21.38■■□□□ 1.01
XRCC3-218ENST00000557439 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
XRCC3-218ENST00000557439 CNPY2Q9Y2B0 182 aa21.38■■□□□ 1.01
XRCC3-218ENST00000557439 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
XRCC3-218ENST00000557439 AMOTQ4VCS5 1084 aa21.37■■□□□ 1.01
XRCC3-218ENST00000557439 ZSCAN30Q86W11 494 aa21.37■■□□□ 1.01
XRCC3-218ENST00000557439 FAM227BQ96M60 508 aa21.37■■□□□ 1.01
XRCC3-218ENST00000557439 ECHDC1Q9NTX5 307 aa21.37■■□□□ 1.01
XRCC3-218ENST00000557439 SASH1O94885 1247 aa21.37■■□□□ 1.01
XRCC3-218ENST00000557439 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
XRCC3-218ENST00000557439 EAF2Q96CJ1 260 aaPredicted RBP21.36■■□□□ 1.01
XRCC3-218ENST00000557439 JAKMIP1Q96N16 626 aaKnown RBP21.36■■□□□ 1.01
XRCC3-218ENST00000557439 MBD3O95983 291 aa21.36■■□□□ 1.01
XRCC3-218ENST00000557439 CCDC83Q8IWF9 413 aa21.36■■□□□ 1.01
XRCC3-218ENST00000557439 MTX1Q13505 466 aa21.35■■□□□ 1.01
XRCC3-218ENST00000557439 MPNDQ8N594 471 aa21.35■■□□□ 1.01
XRCC3-218ENST00000557439 GRM8O00222 908 aa21.35■■□□□ 1.01
XRCC3-218ENST00000557439 SYT1P21579 422 aa21.35■■□□□ 1.01
XRCC3-218ENST00000557439 TTC41PQ6P2S7 1318 aa21.35■■□□□ 1.01
XRCC3-218ENST00000557439 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
XRCC3-218ENST00000557439 PDIA6Q15084 440 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 TCEANC2Q96MN5 208 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 RGPD5Q99666 1765 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
XRCC3-218ENST00000557439 ALDH1L1O75891 902 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 PDLIM2Q96JY6 352 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 LIMCH1Q9UPQ0 1083 aa21.34■■□□□ 1.01
XRCC3-218ENST00000557439 MSNP26038 577 aaKnown RBP21.33■■□□□ 1.01
XRCC3-218ENST00000557439 KRT28Q7Z3Y7 464 aa21.33■■□□□ 1.01
XRCC3-218ENST00000557439 NECAB1Q8N987 351 aa21.33■■□□□ 1.01
XRCC3-218ENST00000557439 EDC3Q96F86 508 aaKnown RBP21.33■■□□□ 1.01
XRCC3-218ENST00000557439 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.33■■□□□ 1.01
XRCC3-218ENST00000557439 HYPKQ9NX55 129 aa21.33■■□□□ 1
XRCC3-218ENST00000557439 TAF6LQ9Y6J9 622 aa21.33■■□□□ 1
XRCC3-218ENST00000557439 EPHA10Q5JZY3 1008 aa21.32■■□□□ 1
XRCC3-218ENST00000557439 HEG1Q9ULI3 1381 aa21.32■■□□□ 1
XRCC3-218ENST00000557439 FIBPO43427 364 aa21.32■■□□□ 1
XRCC3-218ENST00000557439 NMIQ13287 307 aaPredicted RBP21.32■■□□□ 1
XRCC3-218ENST00000557439 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
XRCC3-218ENST00000557439 LINS1Q8NG48 757 aa21.32■■□□□ 1
XRCC3-218ENST00000557439 NDUFB9Q9Y6M9 179 aa21.32■■□□□ 1
XRCC3-218ENST00000557439 STX6O43752 255 aa21.31■■□□□ 1
XRCC3-218ENST00000557439 ST3GAL1Q11201 340 aa21.31■■□□□ 1
XRCC3-218ENST00000557439 NFATC2IPQ8NCF5 419 aa21.31■■□□□ 1
XRCC3-218ENST00000557439 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
XRCC3-218ENST00000557439 SMC3Q9UQE7 1217 aa21.31■■□□□ 1
XRCC3-218ENST00000557439 ZSCAN22P10073 491 aaPredicted RBP21.31■■□□□ 1
XRCC3-218ENST00000557439 PDRG1Q9NUG6 133 aa21.31■■□□□ 1
XRCC3-218ENST00000557439 CHGBP05060 677 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 G3BP1Q13283 466 aaKnown RBP eCLIP21.3■■□□□ 1
XRCC3-218ENST00000557439 DDX21Q9NR30 783 aaKnown RBP eCLIP21.3■■□□□ 1
XRCC3-218ENST00000557439 A0A0D9SFI3 127 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 GJB2P29033 226 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 KCNJ4P48050 445 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 XAGE3Q8WTP9 111 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 TSPY26PQ9H489 355 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 CRYBG1Q9Y4K1 1723 aa21.3■■□□□ 1
XRCC3-218ENST00000557439 RBM8AQ9Y5S9 174 aaKnown RBP21.3■■□□□ 1
XRCC3-218ENST00000557439 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
XRCC3-218ENST00000557439 EPB41L2O43491 1005 aaKnown RBP21.29■■□□□ 1
XRCC3-218ENST00000557439 ZNF790Q6PG37 636 aa21.29■■□□□ 1
XRCC3-218ENST00000557439 COPS6Q7L5N1 327 aa21.29■■□□□ 1
XRCC3-218ENST00000557439 MYD88Q99836 296 aa21.29■■□□□ 1
XRCC3-218ENST00000557439 CCDC171Q6TFL3 1326 aa21.28■■□□□ 1
XRCC3-218ENST00000557439 ME3Q16798 604 aa21.28■■□□□ 1
XRCC3-218ENST00000557439 RUFY2Q8WXA3 655 aa21.28■■□□□ 1
XRCC3-218ENST00000557439 GPATCH3Q96I76 525 aa21.28■■□□□ 1
XRCC3-218ENST00000557439 ERBB3P21860 1342 aa21.28■■□□□ 1
XRCC3-218ENST00000557439 EVI5LQ96CN4 794 aa21.28■■□□□ 1
XRCC3-218ENST00000557439 NECTIN1Q15223 517 aa21.27■■□□□ 1
XRCC3-218ENST00000557439 ZNF496Q96IT1 587 aaPredicted RBP21.27■■□□□ 1
XRCC3-218ENST00000557439 CHMP4AQ9BY43 222 aa21.27■■□□□ 1
XRCC3-218ENST00000557439 CCDC9Q9Y3X0 531 aaKnown RBP21.27■■□□□ 1
XRCC3-218ENST00000557439 F13A1P00488 732 aa21.27■□□□□ 0.99
XRCC3-218ENST00000557439 CREB3L3Q68CJ9 461 aa21.27■□□□□ 0.99
XRCC3-218ENST00000557439 ERC1Q8IUD2 1116 aa21.27■□□□□ 0.99
XRCC3-218ENST00000557439 USP16Q9Y5T5 823 aa21.27■□□□□ 0.99
XRCC3-218ENST00000557439 DNM1Q05193 864 aaKnown RBP21.26■□□□□ 0.99
XRCC3-218ENST00000557439 PROSER2Q86WR7 435 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms