RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 CCDC30Q5VVM6 783 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 TBC1D9BQ66K14 1250 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 BRIP1Q9BX63 1249 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 NYXQ9GZU5 481 aa10.15□□□□□ -0.78
PSEN1-222ENST00000557356 NIP7Q9Y221 180 aaKnown RBP eCLIP10.15□□□□□ -0.78
PSEN1-222ENST00000557356 H0YIN7 160 aa10.14□□□□□ -0.79
PSEN1-222ENST00000557356 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-222ENST00000557356 PARP10Q53GL7 1025 aa10.14□□□□□ -0.79
PSEN1-222ENST00000557356 DIEXFQ68CQ4 756 aaKnown RBP10.14□□□□□ -0.79
PSEN1-222ENST00000557356 GIGYF2Q6Y7W6 1299 aaKnown RBP10.14□□□□□ -0.79
PSEN1-222ENST00000557356 NBPF5PQ86XG9 351 aaPredicted RBP10.14□□□□□ -0.79
PSEN1-222ENST00000557356 CNBD1Q8NA66 436 aa10.14□□□□□ -0.79
PSEN1-222ENST00000557356 MYH16Q9H6N6 1097 aa10.14□□□□□ -0.79
PSEN1-222ENST00000557356 C10orf71Q711Q0 1435 aa10.14□□□□□ -0.79
PSEN1-222ENST00000557356 A0A0G2JLW4 131 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 DPEP1P16444 411 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 PDIA6Q15084 440 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 PPP1R42Q7Z4L9 355 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 STK31Q9BXU1 1019 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 KDM3BQ7LBC6 1761 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 C4AP0C0L4 1744 aa10.13□□□□□ -0.79
PSEN1-222ENST00000557356 DDX58O95786 925 aaKnown RBP10.12□□□□□ -0.79
PSEN1-222ENST00000557356 YY1P25490 414 aa10.12□□□□□ -0.79
PSEN1-222ENST00000557356 DALRD3Q5D0E6 543 aaKnown RBP10.12□□□□□ -0.79
PSEN1-222ENST00000557356 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
PSEN1-222ENST00000557356 ELL2O00472 640 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-222ENST00000557356 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
PSEN1-222ENST00000557356 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
PSEN1-222ENST00000557356 HLFQ16534 295 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 PRR5LQ6MZQ0 368 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 ANKRD13DQ6ZTN6 518 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 C2CD5Q86YS7 1000 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 TTLL6Q8N841 843 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 PLBD2Q8NHP8 589 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 XAGE3Q8WTP9 111 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 NECTIN2Q92692 538 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 CNKSR1Q969H4 720 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 ZBTB3Q9H5J0 574 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 CHPF2Q9P2E5 772 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 BCS1LQ9Y276 419 aa10.11□□□□□ -0.79
PSEN1-222ENST00000557356 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
PSEN1-222ENST00000557356 RNF123Q5XPI4 1314 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 YBX3P16989 372 aaKnown RBP eCLIP10.1□□□□□ -0.79
PSEN1-222ENST00000557356 TCIRG1Q13488 830 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 KRT24Q2M2I5 525 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 TWISTNBQ3B726 338 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-222ENST00000557356 STYK1Q6J9G0 422 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 TTLL7Q6ZT98 887 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 LRP10Q7Z4F1 713 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 ZNF34Q8IZ26 560 aa10.1□□□□□ -0.79
PSEN1-222ENST00000557356 ATP10DQ9P241 1426 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 NPR1P16066 1061 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 KCNA3P22001 575 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 ALDH1B1P30837 517 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 SOGA3Q5TF21 947 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 ARHGAP27Q6ZUM4 889 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 C8orf58Q8NAV2 365 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 ZNF622Q969S3 477 aaKnown RBP eCLIP10.09□□□□□ -0.79
PSEN1-222ENST00000557356 MASTLQ96GX5 879 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
PSEN1-222ENST00000557356 PXDNLA1KZ92 1463 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
PSEN1-222ENST00000557356 KLRG2A4D1S0 409 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-222ENST00000557356 CHRNA5P30532 468 aa10.08□□□□□ -0.8
PSEN1-222ENST00000557356 TRIM28Q13263 835 aaKnown RBP10.08□□□□□ -0.8
PSEN1-222ENST00000557356 PROSER3Q2NL68 480 aa10.08□□□□□ -0.8
PSEN1-222ENST00000557356 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
PSEN1-222ENST00000557356 NLRP3Q96P20 1036 aa10.08□□□□□ -0.8
PSEN1-222ENST00000557356 IBTKQ9P2D0 1353 aaPredicted RBP10.08□□□□□ -0.8
PSEN1-222ENST00000557356 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 E9PSI1 815 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 ANXA1P04083 346 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 SRGNP10124 158 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 GPTP24298 496 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 GRIPAP1Q4V328 841 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 SLC10A5Q5PT55 438 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 ZNF428Q96B54 188 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 TMX4Q9H1E5 349 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-222ENST00000557356 KIF13BQ9NQT8 1826 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 FANCIQ9NVI1 1328 aa10.07□□□□□ -0.8
PSEN1-222ENST00000557356 VAMP4O75379 141 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 NEXNQ0ZGT2 675 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 CC2D2BQ6DHV5 1058 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 TSPYL6Q8N831 410 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 RPGRQ92834 1020 aaKnown RBP10.06□□□□□ -0.8
PSEN1-222ENST00000557356 TRMT112Q9UI30 125 aaKnown RBP10.06□□□□□ -0.8
PSEN1-222ENST00000557356 SH3TC1Q8TE82 1336 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 SCN7AQ01118 1682 aa10.06□□□□□ -0.8
PSEN1-222ENST00000557356 NRXN2Q9P2S2 1712 aa10.05□□□□□ -0.8
PSEN1-222ENST00000557356 EXOSC9Q06265 439 aaKnown RBP10.05□□□□□ -0.8
PSEN1-222ENST00000557356 KSR2Q6VAB6 950 aa10.05□□□□□ -0.8
PSEN1-222ENST00000557356 NLRP10Q86W26 655 aa10.05□□□□□ -0.8
PSEN1-222ENST00000557356 MIER1Q8N108 512 aa10.05□□□□□ -0.8
PSEN1-222ENST00000557356 CNKSR2Q8WXI2 1034 aa10.05□□□□□ -0.8
PSEN1-222ENST00000557356 RBM17Q96I25 401 aaKnown RBP10.05□□□□□ -0.8
PSEN1-222ENST00000557356 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms