RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 MIER1Q8N108 512 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 SETDB2Q96T68 719 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 CHPF2Q9P2E5 772 aa21.65■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 AFDNP55196 1824 aaKnown RBP21.64■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 NRXN2Q9P2S2 1712 aa21.64■■□□□ 1.06
TVP23C-CDRT4-204ENST00000557349 MAP3K15Q6ZN16 1313 aa21.64■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 ZBTB3Q9H5J0 574 aa21.64■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 RGL2O15211 777 aa21.63■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 DBF4Q9UBU7 674 aaPredicted RBP21.63■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 FANCIQ9NVI1 1328 aa21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 ERVV-1B6SEH8 477 aa21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 TGFB2P61812 414 aa21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 HLFQ16534 295 aa21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 C8orf58Q8NAV2 365 aa21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 WWC3Q9ULE0 1092 aa21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 NIP7Q9Y221 180 aaKnown RBP eCLIP21.62■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 KIAA1551Q9HCM1 1747 aa21.61■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 AIMP1Q12904 312 aaKnown RBP21.61■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 LRP10Q7Z4F1 713 aa21.61■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 CNBD1Q8NA66 436 aa21.61■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 XAGE3Q8WTP9 111 aa21.6■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 CHMP4AQ9BY43 222 aa21.6■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 MYH16Q9H6N6 1097 aa21.6■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 A0A0G2JLW4 131 aa21.59■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 DPEP1P16444 411 aa21.59■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 COPS6Q7L5N1 327 aa21.59■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 NBPF5PQ86XG9 351 aaPredicted RBP21.59■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 TSPYL6Q8N831 410 aa21.59■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 NUP98P52948 1817 aa21.58■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 ST5P78524 1137 aa21.58■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 TWISTNBQ3B726 338 aaPredicted RBP21.58■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 PRR5LQ6MZQ0 368 aa21.58■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 HYPKQ9NX55 129 aa21.58■■□□□ 1.05
TVP23C-CDRT4-204ENST00000557349 FAM177BA6PVY3 158 aa21.57■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 YBX3P16989 372 aaKnown RBP eCLIP21.57■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 GOLGA2Q08379 1002 aa21.57■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 CCDC30Q5VVM6 783 aa21.57■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 GIGYF2Q6Y7W6 1299 aaKnown RBP21.57■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 GPTP24298 496 aa21.56■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 CHRNA5P30532 468 aa21.56■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 CCDC24Q8N4L8 307 aa21.56■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 ZNF521Q96K83 1311 aa21.55■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 STK31Q9BXU1 1019 aa21.55■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 SPINK5Q9NQ38 1064 aaPredicted RBP21.55■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 GRIN3BO60391 1043 aa21.54■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 GTF2E1P29083 439 aaPredicted RBP21.54■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 TPTE2Q6XPS3 522 aa21.54■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 BCS1LQ9Y276 419 aa21.54■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 PDE6BP35913 854 aa21.53■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 EXOSC9Q06265 439 aaKnown RBP21.53■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 HSP90AB3PQ58FF7 597 aa21.53■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 BRIP1Q9BX63 1249 aa21.53■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 ANKRD31Q8N7Z5 1873 aa21.53■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 UBN2Q6ZU65 1347 aa21.53■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 BRCA1P38398 1863 aaKnown RBP21.52■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 ANKRD36CQ5JPF3 1778 aa21.52■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 C2CD5Q86YS7 1000 aa21.52■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 PLBD2Q8NHP8 589 aa21.52■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 NYXQ9GZU5 481 aa21.52■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
TVP23C-CDRT4-204ENST00000557349 IBTKQ9P2D0 1353 aaPredicted RBP21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 H0YIN7 160 aa21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 TCERG1O14776 1098 aaKnown RBP21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 PARP10Q53GL7 1025 aa21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 ANKRD13DQ6ZTN6 518 aa21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 ZNF34Q8IZ26 560 aa21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 PHAXQ9H814 394 aaKnown RBP21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 DLEC1Q9Y238 1755 aa21.51■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 KCNA3P22001 575 aa21.5■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 COL11A2P13942 1736 aaPredicted RBP21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 ARFGEF2Q9Y6D5 1785 aa21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 E9PSI1 815 aa21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 DALRD3Q5D0E6 543 aaKnown RBP21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 PPP1R42Q7Z4L9 355 aa21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 RIC3Q7Z5B4 369 aa21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 PDZRN3Q9UPQ7 1066 aa21.49■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 DDX58O95786 925 aaKnown RBP21.48■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 SUSD4Q5VX71 490 aa21.48■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 ABCC12Q96J65 1359 aa21.48■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 TCIRG1Q13488 830 aa21.47■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 GOLGB1Q14789 3259 aaKnown RBP21.47■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 VAMP4O75379 141 aa21.46■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 NTSR2O95665 410 aa21.46■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 ERFEQ4G0M1 354 aa21.46■■□□□ 1.03
TVP23C-CDRT4-204ENST00000557349 ZNF622Q969S3 477 aaKnown RBP eCLIP21.46■■□□□ 1.032e-8■■□□□ 14.5
TVP23C-CDRT4-204ENST00000557349 TNRC6CQ9HCJ0 1690 aaKnown RBP21.45■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 YY1P25490 414 aa21.45■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 NLRP10Q86W26 655 aa21.45■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 UTP14AQ9BVJ6 771 aaKnown RBP21.45■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 TTLL6Q8N841 843 aa21.44■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 CHD4Q14839 1912 aa21.44■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 RNF123Q5XPI4 1314 aa21.44■■□□□ 1.02
TVP23C-CDRT4-204ENST00000557349 ATP5J2-PTCD1G3V325 749 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms