RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ZNF784Q8NCA9 323 aaPredicted RBP15.56■□□□□ 0.08
SYNE2-226ENST00000557084 TRIM35Q9UPQ4 493 aa15.56■□□□□ 0.08
SYNE2-226ENST00000557084 CHD4Q14839 1912 aa15.55■□□□□ 0.08
SYNE2-226ENST00000557084 H0YIN7 160 aa15.55■□□□□ 0.08
SYNE2-226ENST00000557084 ST5P78524 1137 aa15.55■□□□□ 0.08
SYNE2-226ENST00000557084 NBPF5PQ86XG9 351 aaPredicted RBP15.55■□□□□ 0.08
SYNE2-226ENST00000557084 CHL1O00533 1208 aa15.54■□□□□ 0.08
SYNE2-226ENST00000557084 C2CD5Q86YS7 1000 aa15.54■□□□□ 0.08
SYNE2-226ENST00000557084 NIP7Q9Y221 180 aaKnown RBP eCLIP15.54■□□□□ 0.08
SYNE2-226ENST00000557084 ERBB4Q15303 1308 aa15.53■□□□□ 0.08
SYNE2-226ENST00000557084 KCNA3P22001 575 aa15.53■□□□□ 0.08
SYNE2-226ENST00000557084 GTF2E1P29083 439 aaPredicted RBP15.53■□□□□ 0.08
SYNE2-226ENST00000557084 PDE6BP35913 854 aa15.53■□□□□ 0.08
SYNE2-226ENST00000557084 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
SYNE2-226ENST00000557084 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
SYNE2-226ENST00000557084 KIF13BQ9NQT8 1826 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 RGL2O15211 777 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 PRR5LQ6MZQ0 368 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 NECTIN2Q92692 538 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.08
SYNE2-226ENST00000557084 N4BP2Q86UW6 1770 aaPredicted RBP15.52■□□□□ 0.07
SYNE2-226ENST00000557084 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
SYNE2-226ENST00000557084 ERVV-1B6SEH8 477 aa15.51■□□□□ 0.07
SYNE2-226ENST00000557084 TPTE2Q6XPS3 522 aa15.51■□□□□ 0.07
SYNE2-226ENST00000557084 TTLL6Q8N841 843 aa15.51■□□□□ 0.07
SYNE2-226ENST00000557084 ZNF622Q969S3 477 aaKnown RBP eCLIP15.51■□□□□ 0.07
SYNE2-226ENST00000557084 MAP3K15Q6ZN16 1313 aa15.5■□□□□ 0.07
SYNE2-226ENST00000557084 GNAI1P63096 354 aa15.5■□□□□ 0.07
SYNE2-226ENST00000557084 HLFQ16534 295 aa15.5■□□□□ 0.07
SYNE2-226ENST00000557084 TTLL7Q6ZT98 887 aa15.5■□□□□ 0.07
SYNE2-226ENST00000557084 ZBTB3Q9H5J0 574 aa15.5■□□□□ 0.07
SYNE2-226ENST00000557084 SCN7AQ01118 1682 aa15.5■□□□□ 0.07
SYNE2-226ENST00000557084 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
SYNE2-226ENST00000557084 AIMP1Q12904 312 aaKnown RBP15.48■□□□□ 0.07
SYNE2-226ENST00000557084 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
SYNE2-226ENST00000557084 HDGFL1Q5TGJ6 251 aa15.48■□□□□ 0.07
SYNE2-226ENST00000557084 NYXQ9GZU5 481 aa15.48■□□□□ 0.07
SYNE2-226ENST00000557084 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
SYNE2-226ENST00000557084 LAMB4A4D0S4 1761 aa15.48■□□□□ 0.07
SYNE2-226ENST00000557084 AFDNP55196 1824 aaKnown RBP15.47■□□□□ 0.07
SYNE2-226ENST00000557084 SENP3-EIF4A1A0A087X0R7 540 aa15.47■□□□□ 0.07
SYNE2-226ENST00000557084 ANXA1P04083 346 aa15.47■□□□□ 0.07
SYNE2-226ENST00000557084 HOXB7P09629 217 aa15.47■□□□□ 0.07
SYNE2-226ENST00000557084 GPTP24298 496 aa15.47■□□□□ 0.07
SYNE2-226ENST00000557084 ZNF526Q8TF50 670 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-226ENST00000557084 ATP10DQ9P241 1426 aa15.46■□□□□ 0.07
SYNE2-226ENST00000557084 PDIA6Q15084 440 aa15.46■□□□□ 0.07
SYNE2-226ENST00000557084 PROSER3Q2NL68 480 aa15.46■□□□□ 0.07
SYNE2-226ENST00000557084 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
SYNE2-226ENST00000557084 GPBP1L1Q9HC44 474 aaPredicted RBP15.46■□□□□ 0.07
SYNE2-226ENST00000557084 DDX21Q9NR30 783 aaKnown RBP eCLIP15.46■□□□□ 0.07
SYNE2-226ENST00000557084 KIAA1551Q9HCM1 1747 aa15.46■□□□□ 0.06
SYNE2-226ENST00000557084 GIGYF2Q6Y7W6 1299 aaKnown RBP15.45■□□□□ 0.06
SYNE2-226ENST00000557084 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 FAM9BQ8IZU0 186 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 XAGE3Q8WTP9 111 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 CNKSR1Q969H4 720 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 MASTLQ96GX5 879 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-226ENST00000557084 DBF4Q9UBU7 674 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-226ENST00000557084 NRXN2Q9P2S2 1712 aa15.45■□□□□ 0.06
SYNE2-226ENST00000557084 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
SYNE2-226ENST00000557084 ELL2O00472 640 aaPredicted RBP15.44■□□□□ 0.06
SYNE2-226ENST00000557084 ZNF853P0CG23 659 aa15.44■□□□□ 0.06
SYNE2-226ENST00000557084 SRGNP10124 158 aa15.44■□□□□ 0.06
SYNE2-226ENST00000557084 C9orf131Q5VYM1 1079 aa15.44■□□□□ 0.06
SYNE2-226ENST00000557084 STYK1Q6J9G0 422 aa15.44■□□□□ 0.06
SYNE2-226ENST00000557084 PPP1R42Q7Z4L9 355 aa15.44■□□□□ 0.06
SYNE2-226ENST00000557084 NPR1P16066 1061 aa15.43■□□□□ 0.06
SYNE2-226ENST00000557084 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
SYNE2-226ENST00000557084 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
SYNE2-226ENST00000557084 HSP90AB3PQ58FF7 597 aa15.43■□□□□ 0.06
SYNE2-226ENST00000557084 HYPKQ9NX55 129 aa15.43■□□□□ 0.06
SYNE2-226ENST00000557084 RNF181Q9P0P0 153 aa15.43■□□□□ 0.06
SYNE2-226ENST00000557084 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-226ENST00000557084 C21orf2O43822 256 aa15.42■□□□□ 0.06
SYNE2-226ENST00000557084 NUTM1Q86Y26 1132 aa15.42■□□□□ 0.06
SYNE2-226ENST00000557084 WWC1Q8IX03 1113 aa15.42■□□□□ 0.06
SYNE2-226ENST00000557084 ERFEQ4G0M1 354 aa15.41■□□□□ 0.06
SYNE2-226ENST00000557084 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
SYNE2-226ENST00000557084 SUSD4Q5VX71 490 aa15.41■□□□□ 0.06
SYNE2-226ENST00000557084 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
SYNE2-226ENST00000557084 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
SYNE2-226ENST00000557084 LRP10Q7Z4F1 713 aa15.41■□□□□ 0.06
SYNE2-226ENST00000557084 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
SYNE2-226ENST00000557084 UTP14AQ9BVJ6 771 aaKnown RBP15.41■□□□□ 0.06
SYNE2-226ENST00000557084 ADCY9O60503 1353 aa15.4■□□□□ 0.06
SYNE2-226ENST00000557084 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
SYNE2-226ENST00000557084 LMNB1P20700 586 aa15.4■□□□□ 0.06
SYNE2-226ENST00000557084 ANKRD13DQ6ZTN6 518 aa15.4■□□□□ 0.06
SYNE2-226ENST00000557084 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
SYNE2-226ENST00000557084 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
SYNE2-226ENST00000557084 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
SYNE2-226ENST00000557084 UBN2Q6ZU65 1347 aa15.4■□□□□ 0.06
SYNE2-226ENST00000557084 ARFGEF1Q9Y6D6 1849 aa15.39■□□□□ 0.05
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