RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 TSPY10P0CW01 314 aa8.67□□□□□ -1.02
TMEM260-212ENST00000556810 DNMT1P26358 1616 aaKnown RBP8.67□□□□□ -1.02
TMEM260-212ENST00000556810 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
TMEM260-212ENST00000556810 CDC42BPAQ5VT25 1732 aa8.67□□□□□ -1.02
TMEM260-212ENST00000556810 DHX57Q6P158 1386 aaKnown RBP8.67□□□□□ -1.02
TMEM260-212ENST00000556810 RIMS1Q86UR5 1692 aaKnown RBP8.67□□□□□ -1.02
TMEM260-212ENST00000556810 GCC2Q8IWJ2 1684 aa8.67□□□□□ -1.02
TMEM260-212ENST00000556810 GTPBP3Q969Y2 492 aaKnown RBP8.67□□□□□ -1.02
TMEM260-212ENST00000556810 FHDC1Q9C0D6 1143 aaPredicted RBP8.67□□□□□ -1.02
TMEM260-212ENST00000556810 GPATCH8Q9UKJ3 1502 aaKnown RBP8.67□□□□□ -1.02
TMEM260-212ENST00000556810 PLEKHH2Q8IVE3 1493 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 ARHGEF15O94989 841 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 F11P03951 625 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 GTF2E1P29083 439 aaPredicted RBP8.66□□□□□ -1.02
TMEM260-212ENST00000556810 SOX11P35716 441 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 KCNMA1Q12791 1236 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 ARXQ96QS3 562 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 ETNK1Q9HBU6 452 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 COG6Q9Y2V7 657 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 MYO5CQ9NQX4 1742 aa8.66□□□□□ -1.02
TMEM260-212ENST00000556810 ADGBQ8N7X0 1667 aa8.65□□□□□ -1.02
TMEM260-212ENST00000556810 DENND4BO75064 1496 aaPredicted RBP8.65□□□□□ -1.02
TMEM260-212ENST00000556810 STAU1O95793 577 aaKnown RBP8.65□□□□□ -1.02
TMEM260-212ENST00000556810 PHKA2P46019 1235 aa8.65□□□□□ -1.02
TMEM260-212ENST00000556810 MAP7D1Q3KQU3 841 aa8.65□□□□□ -1.02
TMEM260-212ENST00000556810 GNASQ5JWF2 1037 aa8.65□□□□□ -1.02
TMEM260-212ENST00000556810 TMEM214Q6NUQ4 689 aaKnown RBP8.65□□□□□ -1.02
TMEM260-212ENST00000556810 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
TMEM260-212ENST00000556810 NUCKS1Q9H1E3 243 aaKnown RBP8.65□□□□□ -1.02
TMEM260-212ENST00000556810 RICTORQ6R327 1708 aa8.65□□□□□ -1.03
TMEM260-212ENST00000556810 DAPK1P53355 1430 aa8.64□□□□□ -1.03
TMEM260-212ENST00000556810 LYPD4Q6UWN0 246 aa8.64□□□□□ -1.03
TMEM260-212ENST00000556810 PLPP7Q8NBV4 271 aa8.64□□□□□ -1.03
TMEM260-212ENST00000556810 PREX2Q70Z35 1606 aa8.64□□□□□ -1.03
TMEM260-212ENST00000556810 CAMSAP2Q08AD1 1489 aa8.64□□□□□ -1.03
TMEM260-212ENST00000556810 ANKRD30AQ9BXX3 1397 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-212ENST00000556810 GSK3AP49840 483 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 MLECQ14165 292 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 TLR1Q15399 786 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 C4orf17Q53FE4 359 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 ZNF777Q9ULD5 760 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-212ENST00000556810 ARHGEF40Q8TER5 1519 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 FANCAO15360 1455 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 SIGLEC1Q9BZZ2 1709 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 NAIPQ13075 1403 aa8.63□□□□□ -1.03
TMEM260-212ENST00000556810 ARHGEF5Q12774 1597 aa8.62□□□□□ -1.03
TMEM260-212ENST00000556810 CELA2BP08218 269 aaPredicted RBP8.62□□□□□ -1.03
TMEM260-212ENST00000556810 MAP3K10Q02779 954 aa8.62□□□□□ -1.03
TMEM260-212ENST00000556810 CDC42BPBQ9Y5S2 1711 aa8.62□□□□□ -1.03
TMEM260-212ENST00000556810 CROCC2H7BZ55 1655 aa8.62□□□□□ -1.03
TMEM260-212ENST00000556810 POGZQ7Z3K3 1410 aa8.62□□□□□ -1.03
TMEM260-212ENST00000556810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.61□□□□□ -1.03
TMEM260-212ENST00000556810 SCNN1DP51172 638 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 GDF10P55107 478 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 EFCAB2Q5VUJ9 269 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 SHANK2Q9UPX8 1470 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 ABCC5O15440 1437 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 YEATS2Q9ULM3 1422 aa8.61□□□□□ -1.03
TMEM260-212ENST00000556810 ADGRL2O95490 1459 aa8.6□□□□□ -1.03
TMEM260-212ENST00000556810 THBS1P07996 1170 aa8.6□□□□□ -1.03
TMEM260-212ENST00000556810 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
TMEM260-212ENST00000556810 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
TMEM260-212ENST00000556810 KIAA1107Q9UPP5 1409 aa8.6□□□□□ -1.03
TMEM260-212ENST00000556810 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
TMEM260-212ENST00000556810 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 ZFYVE16Q7Z3T8 1539 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 PIK3CDO00329 1044 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 INHAP05111 366 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 MX2P20592 715 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 MSX1P28360 303 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 CEBPAP49715 358 aaPredicted RBP8.59□□□□□ -1.03
TMEM260-212ENST00000556810 RASSF7Q02833 373 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 RRP7BPQ9NSQ0 103 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 PLCH2O75038 1416 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 TTC37Q6PGP7 1564 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 ZMYM4Q5VZL5 1548 aa8.59□□□□□ -1.03
TMEM260-212ENST00000556810 FER1L4A9Z1Z3 1794 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 MAGI2Q86UL8 1455 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 PTPRKQ15262 1439 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 SCAPERQ9BY12 1400 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 CSB-PGBD3P0DP91 1061 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 LBRQ14739 615 aaKnown RBP8.58□□□□□ -1.04
TMEM260-212ENST00000556810 PGBD3Q8N328 593 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 TMEM151AQ8N4L1 468 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 CFHR5Q9BXR6 569 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 RUBCNLQ9H714 662 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 ENAMQ9NRM1 1142 aa8.58□□□□□ -1.04
TMEM260-212ENST00000556810 NSFL1CQ9UNZ2 370 aaKnown RBP8.58□□□□□ -1.04
TMEM260-212ENST00000556810 CCDC141Q6ZP82 1450 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 NCOA1Q15788 1441 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 RAD21O60216 631 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 GDF11O95390 407 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 PLA2G4AP47712 749 aa8.57□□□□□ -1.04
TMEM260-212ENST00000556810 ACDQ96AP0 544 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms