RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SCHIP1Q9P0W5 487 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-241ENST00000556374 ABCC10Q5T3U5 1492 aa6.83□□□□□ -1.32
ATXN3-241ENST00000556374 TDRD9Q8NDG6 1382 aaKnown RBP6.82□□□□□ -1.32
ATXN3-241ENST00000556374 ZEB1P37275 1124 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-241ENST00000556374 GTF2IP78347 998 aa6.82□□□□□ -1.32
ATXN3-241ENST00000556374 TNP2Q05952 138 aa6.82□□□□□ -1.32
ATXN3-241ENST00000556374 FBXO41Q8TF61 875 aa6.82□□□□□ -1.32
ATXN3-241ENST00000556374 CHMP7Q8WUX9 453 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-241ENST00000556374 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
ATXN3-241ENST00000556374 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 C2CD2LO14523 706 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 ADAM23O75077 832 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 EPXP11678 715 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 ADH6P28332 368 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 NCOA4Q13772 614 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 PLA2G4EQ3MJ16 856 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 POTEAQ6S8J7 498 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 AIDAQ96BJ3 306 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 ZIC5Q96T25 663 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 CABP1Q9NZU7 370 aa6.81□□□□□ -1.32
ATXN3-241ENST00000556374 FGD5Q6ZNL6 1462 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 USP17L5A8MUK1 530 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 SHISA8B8ZZ34 492 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 PIK3CDO00329 1044 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 EML1O00423 815 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 STAU1O95793 577 aaKnown RBP6.8□□□□□ -1.32
ATXN3-241ENST00000556374 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
ATXN3-241ENST00000556374 HIRAP54198 1017 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-241ENST00000556374 EPHA4P54764 986 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 CTBSQ01459 385 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 ARSJQ5FYB0 599 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-241ENST00000556374 C1orf229Q6ZS94 237 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-241ENST00000556374 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
ATXN3-241ENST00000556374 GGA1Q9UJY5 639 aa6.8□□□□□ -1.32
ATXN3-241ENST00000556374 ABCA5Q8WWZ7 1642 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 SOGA1O94964 1423 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 LOC105371045A0A1W2PR82 267 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 GNB5O14775 395 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 EFSO43281 561 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
ATXN3-241ENST00000556374 NOS2P35228 1153 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 C1orf53Q5VUE5 145 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 LINC00114Q6XXX2 140 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 LARGE2Q8N3Y3 721 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 BTBD6Q96KE9 485 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 SPOCK3Q9BQ16 436 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 ZNF358Q9NW07 568 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 SERTAD1Q9UHV2 236 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 CCDC88BA6NC98 1476 aa6.79□□□□□ -1.32
ATXN3-241ENST00000556374 ADAMTS12P58397 1594 aa6.78□□□□□ -1.32
ATXN3-241ENST00000556374 HOXB4P17483 251 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-241ENST00000556374 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-241ENST00000556374 GAS2L2Q8NHY3 880 aa6.78□□□□□ -1.32
ATXN3-241ENST00000556374 MARK1Q9P0L2 795 aa6.78□□□□□ -1.32
ATXN3-241ENST00000556374 CHMP3Q9Y3E7 222 aa6.78□□□□□ -1.32
ATXN3-241ENST00000556374 GJA3Q9Y6H8 435 aa6.78□□□□□ -1.32
ATXN3-241ENST00000556374 GRIN2AQ12879 1464 aa6.78□□□□□ -1.32
ATXN3-241ENST00000556374 PALM3A6NDB9 673 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-241ENST00000556374 ATP9BO43861 1147 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 DGKGP49619 791 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 PSMA6P60900 246 aaKnown RBP6.77□□□□□ -1.33
ATXN3-241ENST00000556374 SNRPNP63162 240 aaKnown RBP6.77□□□□□ -1.33
ATXN3-241ENST00000556374 SIX5Q8N196 739 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 STAG2Q8N3U4 1231 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 L3MBTL2Q969R5 705 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 EFCC1Q9HA90 598 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 ANKIB1Q9P2G1 1089 aa6.77□□□□□ -1.33
ATXN3-241ENST00000556374 PPRC1Q5VV67 1664 aaKnown RBP6.77□□□□□ -1.33
ATXN3-241ENST00000556374 NUP160Q12769 1436 aa6.76□□□□□ -1.33
ATXN3-241ENST00000556374 ADCY10Q96PN6 1610 aa6.76□□□□□ -1.33
ATXN3-241ENST00000556374 ZBTB7BO15156 539 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-241ENST00000556374 PSME1Q06323 249 aa6.76□□□□□ -1.33
ATXN3-241ENST00000556374 HIF1AQ16665 826 aa6.76□□□□□ -1.33
ATXN3-241ENST00000556374 TMEM132AQ24JP5 1023 aa6.76□□□□□ -1.33
ATXN3-241ENST00000556374 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-241ENST00000556374 C7orf43Q8WVR3 580 aa6.76□□□□□ -1.33
ATXN3-241ENST00000556374 SERTM1A2A2V5 107 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 KHNYNO15037 678 aaKnown RBP6.75□□□□□ -1.33
ATXN3-241ENST00000556374 ITGB2P05107 769 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 AMPD1P23109 780 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 KCNQ4P56696 695 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 FAM69CQ0P6D2 419 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 CCDC102BQ68D86 513 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 BICDL1Q6ZP65 573 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 POM121Q96HA1 1249 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 RRAGCQ9HB90 399 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 USP3Q9Y6I4 520 aa6.75□□□□□ -1.33
ATXN3-241ENST00000556374 USP17L3A6NCW0 530 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 USP17L4A6NCW7 530 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 NEURL1BA8MQ27 555 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 ADARB2-AS1A8MUL3 147 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 SIN3BO75182 1162 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 PROCP04070 461 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 USP17L2Q6R6M4 530 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 CHSY3Q70JA7 882 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 USP17L1Q7RTZ2 530 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 SLC9A9Q8IVB4 645 aa6.74□□□□□ -1.33
ATXN3-241ENST00000556374 PRR12Q9ULL5 1215 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms