RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
HNRNPC-224ENST00000556226 PRAMEF22A3QJZ6 481 aa12.98□□□□□ -0.33
HNRNPC-224ENST00000556226 PDE6BP35913 854 aa12.97□□□□□ -0.33
HNRNPC-224ENST00000556226 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
HNRNPC-224ENST00000556226 MCM10Q7L590 875 aa12.97□□□□□ -0.33
HNRNPC-224ENST00000556226 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
HNRNPC-224ENST00000556226 USP16Q9Y5T5 823 aa12.97□□□□□ -0.33
HNRNPC-224ENST00000556226 ARFGEF2Q9Y6D5 1785 aa12.97□□□□□ -0.33
HNRNPC-224ENST00000556226 LTBP3Q9NS15 1303 aa12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 SRGNP10124 158 aa12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 PRPF40BQ6NWY9 871 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 PLEKHF1Q96S99 279 aa12.96□□□□□ -0.33
HNRNPC-224ENST00000556226 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
HNRNPC-224ENST00000556226 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
HNRNPC-224ENST00000556226 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
HNRNPC-224ENST00000556226 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
HNRNPC-224ENST00000556226 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
HNRNPC-224ENST00000556226 SNRPA1P09661 255 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-224ENST00000556226 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
HNRNPC-224ENST00000556226 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
HNRNPC-224ENST00000556226 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-224ENST00000556226 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
HNRNPC-224ENST00000556226 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 DDNO94850 711 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 ST5P78524 1137 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 NFE2L2Q16236 605 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 DPY19L2Q6NUT2 758 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 NBPF10Q6P3W6 841 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 C7orf43Q8WVR3 580 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
HNRNPC-224ENST00000556226 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
HNRNPC-224ENST00000556226 NPHP1O15259 732 aa12.92□□□□□ -0.34
HNRNPC-224ENST00000556226 HSPA1AP0DMV8 641 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-224ENST00000556226 HSPA1BP0DMV9 641 aaKnown RBP12.92□□□□□ -0.34
HNRNPC-224ENST00000556226 OLFM4Q6UX06 510 aa12.92□□□□□ -0.34
HNRNPC-224ENST00000556226 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
HNRNPC-224ENST00000556226 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
HNRNPC-224ENST00000556226 CAPN15O75808 1086 aa12.91□□□□□ -0.34
HNRNPC-224ENST00000556226 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-224ENST00000556226 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-224ENST00000556226 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-224ENST00000556226 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
HNRNPC-224ENST00000556226 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
HNRNPC-224ENST00000556226 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
HNRNPC-224ENST00000556226 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.35
HNRNPC-224ENST00000556226 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
HNRNPC-224ENST00000556226 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
HNRNPC-224ENST00000556226 RGL2O15211 777 aa12.89□□□□□ -0.35
HNRNPC-224ENST00000556226 MIS18AQ9NYP9 233 aa12.89□□□□□ -0.35
HNRNPC-224ENST00000556226 NIP7Q9Y221 180 aaKnown RBP eCLIP12.89□□□□□ -0.35
HNRNPC-224ENST00000556226 SNED1Q8TER0 1413 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 NPR1P16066 1061 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 HLFQ16534 295 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 CCDC93Q567U6 631 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 SCN4AP35499 1836 aa12.88□□□□□ -0.35
HNRNPC-224ENST00000556226 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 RIPK4P57078 832 aa12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 BABAM1Q9NWV8 329 aa12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 PASKQ96RG2 1323 aa12.87□□□□□ -0.35
HNRNPC-224ENST00000556226 ADAMTSL1Q8N6G6 1762 aa12.86□□□□□ -0.35
HNRNPC-224ENST00000556226 COL4A5P29400 1685 aa12.86□□□□□ -0.35
HNRNPC-224ENST00000556226 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-224ENST00000556226 EIF4A1P60842 406 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-224ENST00000556226 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
HNRNPC-224ENST00000556226 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-224ENST00000556226 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
HNRNPC-224ENST00000556226 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
HNRNPC-224ENST00000556226 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
HNRNPC-224ENST00000556226 LDHDQ86WU2 507 aa12.85□□□□□ -0.35
HNRNPC-224ENST00000556226 THUMPD2Q9BTF0 503 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-224ENST00000556226 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
HNRNPC-224ENST00000556226 NUP98P52948 1817 aa12.84□□□□□ -0.35
HNRNPC-224ENST00000556226 ITGBL1O95965 494 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-224ENST00000556226 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
HNRNPC-224ENST00000556226 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
HNRNPC-224ENST00000556226 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 RTKN2Q8IZC4 609 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 TSPYL4Q9UJ04 414 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 RNF123Q5XPI4 1314 aa12.83□□□□□ -0.36
HNRNPC-224ENST00000556226 UBN2Q6ZU65 1347 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms