RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZSCAN23Q3MJ62 389 aa17.74■□□□□ 0.43
NEK9-209ENST00000556170 NEURL4Q96JN8 1562 aa17.73■□□□□ 0.43
NEK9-209ENST00000556170 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
NEK9-209ENST00000556170 KIF2CQ99661 725 aa17.73■□□□□ 0.43
NEK9-209ENST00000556170 COL3A1P02461 1466 aaPredicted RBP17.73■□□□□ 0.43
NEK9-209ENST00000556170 SF3A1Q15459 793 aaKnown RBP17.73■□□□□ 0.43
NEK9-209ENST00000556170 ZNF790Q6PG37 636 aa17.73■□□□□ 0.43
NEK9-209ENST00000556170 TSPY26PQ9H489 355 aa17.73■□□□□ 0.43
NEK9-209ENST00000556170 SNRKQ9NRH2 765 aa17.73■□□□□ 0.43
NEK9-209ENST00000556170 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 HIP1O00291 1037 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 GIGYF1O75420 1035 aaPredicted RBP17.72■□□□□ 0.43
NEK9-209ENST00000556170 SNRPA1P09661 255 aaKnown RBP17.72■□□□□ 0.43
NEK9-209ENST00000556170 CCDC173Q0VFZ6 552 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
NEK9-209ENST00000556170 AK2P54819 239 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 EVI5LQ96CN4 794 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 EDC3Q96F86 508 aaKnown RBP17.72■□□□□ 0.43
NEK9-209ENST00000556170 SUCLG2Q96I99 432 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
NEK9-209ENST00000556170 ISY1Q9ULR0 285 aaKnown RBP17.72■□□□□ 0.43
NEK9-209ENST00000556170 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
NEK9-209ENST00000556170 BEND3Q5T5X7 828 aa17.71■□□□□ 0.43
NEK9-209ENST00000556170 LMBR1LQ6UX01 489 aa17.71■□□□□ 0.43
NEK9-209ENST00000556170 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
NEK9-209ENST00000556170 SIGLEC1Q9BZZ2 1709 aa17.71■□□□□ 0.43
NEK9-209ENST00000556170 RRAGDQ9NQL2 400 aaPredicted RBP17.71■□□□□ 0.43
NEK9-209ENST00000556170 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.43
NEK9-209ENST00000556170 KIF24Q5T7B8 1368 aa17.71■□□□□ 0.42
NEK9-209ENST00000556170 ALDH1L1O75891 902 aa17.71■□□□□ 0.42
NEK9-209ENST00000556170 TFIP11Q9UBB9 837 aaKnown RBP17.71■□□□□ 0.42
NEK9-209ENST00000556170 USP16Q9Y5T5 823 aa17.71■□□□□ 0.42
NEK9-209ENST00000556170 RBM8AQ9Y5S9 174 aaKnown RBP17.7■□□□□ 0.42
NEK9-209ENST00000556170 GJB2P29033 226 aa17.7■□□□□ 0.42
NEK9-209ENST00000556170 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
NEK9-209ENST00000556170 GPTP24298 496 aa17.7■□□□□ 0.42
NEK9-209ENST00000556170 GTF2E1P29083 439 aaPredicted RBP17.7■□□□□ 0.42
NEK9-209ENST00000556170 CCDC57Q2TAC2 916 aa17.7■□□□□ 0.42
NEK9-209ENST00000556170 STK11IPQ8N1F8 1099 aa17.7■□□□□ 0.42
NEK9-209ENST00000556170 NMIQ13287 307 aaPredicted RBP17.69■□□□□ 0.42
NEK9-209ENST00000556170 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 R3HCC1Q9Y3T6 440 aaKnown RBP17.69■□□□□ 0.42
NEK9-209ENST00000556170 GOLIM4O00461 696 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 STX6O43752 255 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 CAMK4Q16566 473 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 CEP126Q9P2H0 1117 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 CNPY2Q9Y2B0 182 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 CPLX1O14810 134 aa17.69■□□□□ 0.42
NEK9-209ENST00000556170 CDK11BP21127 795 aaKnown RBP17.68■□□□□ 0.42
NEK9-209ENST00000556170 ARHGEF25Q86VW2 580 aa17.68■□□□□ 0.42
NEK9-209ENST00000556170 SGSM2O43147 1006 aa17.67■□□□□ 0.42
NEK9-209ENST00000556170 ANAPC15P60006 121 aa17.67■□□□□ 0.42
NEK9-209ENST00000556170 IBTKQ9P2D0 1353 aaPredicted RBP17.67■□□□□ 0.42
NEK9-209ENST00000556170 USP48Q86UV5 1035 aa17.67■□□□□ 0.42
NEK9-209ENST00000556170 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
NEK9-209ENST00000556170 SPC24Q8NBT2 197 aa17.67■□□□□ 0.42
NEK9-209ENST00000556170 BCL11BQ9C0K0 894 aaPredicted RBP17.67■□□□□ 0.42
NEK9-209ENST00000556170 PTPRUQ92729 1446 aa17.66■□□□□ 0.42
NEK9-209ENST00000556170 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
NEK9-209ENST00000556170 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
NEK9-209ENST00000556170 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
NEK9-209ENST00000556170 MYO5BQ9ULV0 1848 aa17.66■□□□□ 0.42
NEK9-209ENST00000556170 PDCP20941 246 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 GUCY1B3Q02153 619 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 TFCP2Q12800 502 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 TTC39AQ5SRH9 613 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 KIF3AQ9Y496 699 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 RASEFQ8IZ41 740 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 EAF2Q96CJ1 260 aaPredicted RBP17.65■□□□□ 0.42
NEK9-209ENST00000556170 SHPRHQ149N8 1683 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
NEK9-209ENST00000556170 CRB1P82279 1406 aa17.65■□□□□ 0.42
NEK9-209ENST00000556170 TIMM10P62072 90 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 KRT85P78386 507 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 FAM173BQ6P4H8 233 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.42
NEK9-209ENST00000556170 LMBRD1Q9NUN5 540 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.42
NEK9-209ENST00000556170 A1BGP04217 495 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
NEK9-209ENST00000556170 CCDC158Q5M9N0 1113 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 IFIT1P09914 478 aaKnown RBP17.64■□□□□ 0.41
NEK9-209ENST00000556170 PTH1RQ03431 593 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 OVOS2A0A0J9YW53 1432 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 OVOS2Q6IE36 1432 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 OSBPL3Q9H4L5 887 aa17.64■□□□□ 0.41
NEK9-209ENST00000556170 HOXB7P09629 217 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 DNM1Q05193 864 aaKnown RBP17.63■□□□□ 0.41
NEK9-209ENST00000556170 FAM13BQ9NYF5 915 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 NPHP3Q7Z494 1330 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 HAND2P61296 217 aa17.63■□□□□ 0.41
NEK9-209ENST00000556170 TRDNQ13061 729 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms