RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 NLRP2Q9NX02 1062 aa11.9□□□□□ -0.5
PSEN1-215ENST00000556011 ANKRD50Q9ULJ7 1429 aa11.9□□□□□ -0.5
PSEN1-215ENST00000556011 LTBP3Q9NS15 1303 aa11.89□□□□□ -0.51
PSEN1-215ENST00000556011 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
PSEN1-215ENST00000556011 FKTNO75072 461 aa11.89□□□□□ -0.51
PSEN1-215ENST00000556011 ZNF157P51786 506 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-215ENST00000556011 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
PSEN1-215ENST00000556011 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
PSEN1-215ENST00000556011 TMEM31Q5JXX7 168 aa11.88□□□□□ -0.51
PSEN1-215ENST00000556011 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
PSEN1-215ENST00000556011 OTOP1Q7RTM1 612 aa11.88□□□□□ -0.51
PSEN1-215ENST00000556011 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
PSEN1-215ENST00000556011 EIF3AQ14152 1382 aaKnown RBP11.88□□□□□ -0.51
PSEN1-215ENST00000556011 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
PSEN1-215ENST00000556011 FAM109BQ6ICB4 259 aaPredicted RBP11.87□□□□□ -0.51
PSEN1-215ENST00000556011 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
PSEN1-215ENST00000556011 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
PSEN1-215ENST00000556011 NOM1Q5C9Z4 860 aaKnown RBP11.86□□□□□ -0.51
PSEN1-215ENST00000556011 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
PSEN1-215ENST00000556011 EPHX3Q9H6B9 360 aa11.86□□□□□ -0.51
PSEN1-215ENST00000556011 RPGRIP1LQ68CZ1 1315 aa11.86□□□□□ -0.51
PSEN1-215ENST00000556011 ZNF318Q5VUA4 2279 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 ST18O60284 1047 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 BMP8BP34820 402 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 EPS15P42566 896 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 ARHGEF25Q86VW2 580 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
PSEN1-215ENST00000556011 GDF15Q99988 308 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 PTPN22Q9Y2R2 807 aa11.85□□□□□ -0.51
PSEN1-215ENST00000556011 MAP2P11137 1827 aaKnown RBP11.84□□□□□ -0.51
PSEN1-215ENST00000556011 RGL2O15211 777 aa11.84□□□□□ -0.51
PSEN1-215ENST00000556011 MYCP01106 439 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-215ENST00000556011 HTATIP2Q9BUP3 242 aa11.84□□□□□ -0.51
PSEN1-215ENST00000556011 POGKQ9P215 609 aa11.84□□□□□ -0.51
PSEN1-215ENST00000556011 CACNA1SQ13698 1873 aa11.83□□□□□ -0.52
PSEN1-215ENST00000556011 SLC10A3P09131 477 aa11.83□□□□□ -0.52
PSEN1-215ENST00000556011 R3HDMLQ9H3Y0 253 aa11.83□□□□□ -0.52
PSEN1-215ENST00000556011 WASLO00401 505 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-215ENST00000556011 NLRP6P59044 892 aa11.82□□□□□ -0.52
PSEN1-215ENST00000556011 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
PSEN1-215ENST00000556011 SAMD7Q7Z3H4 446 aa11.82□□□□□ -0.52
PSEN1-215ENST00000556011 C2CD5Q86YS7 1000 aa11.82□□□□□ -0.52
PSEN1-215ENST00000556011 GPC2Q8N158 579 aa11.82□□□□□ -0.52
PSEN1-215ENST00000556011 ASH1LQ9NR48 2969 aaKnown RBP11.82□□□□□ -0.52
PSEN1-215ENST00000556011 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
PSEN1-215ENST00000556011 AFDNP55196 1824 aaKnown RBP11.81□□□□□ -0.52
PSEN1-215ENST00000556011 LMOD1P29536 600 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-215ENST00000556011 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
PSEN1-215ENST00000556011 MYLIPQ8WY64 445 aa11.81□□□□□ -0.52
PSEN1-215ENST00000556011 LTN1O94822 1766 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 ITGB8P26012 769 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 RFC4P35249 363 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 ITPK1Q13572 414 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 FKBP8Q14318 412 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 TDHQ8IZJ6 230 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 USP38Q8NB14 1042 aa11.8□□□□□ -0.52
PSEN1-215ENST00000556011 NUDT16Q96DE0 195 aaKnown RBP11.8□□□□□ -0.52
PSEN1-215ENST00000556011 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
PSEN1-215ENST00000556011 POLRMTO00411 1230 aaKnown RBP11.79□□□□□ -0.52
PSEN1-215ENST00000556011 DLK2Q6UY11 383 aa11.79□□□□□ -0.52
PSEN1-215ENST00000556011 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
PSEN1-215ENST00000556011 NECAB3Q96P71 396 aaPredicted RBP11.79□□□□□ -0.52
PSEN1-215ENST00000556011 RALYQ9UKM9 306 aaKnown RBP11.79□□□□□ -0.52
PSEN1-215ENST00000556011 ACACBO00763 2458 aa11.79□□□□□ -0.52
PSEN1-215ENST00000556011 FAM86C2PA6NEL3 165 aa11.78□□□□□ -0.52
PSEN1-215ENST00000556011 SOX12O15370 315 aa11.78□□□□□ -0.52
PSEN1-215ENST00000556011 SHISA4Q96DD7 197 aa11.78□□□□□ -0.52
PSEN1-215ENST00000556011 C11orf16Q9NQ32 467 aa11.78□□□□□ -0.52
PSEN1-215ENST00000556011 GJA3Q9Y6H8 435 aa11.78□□□□□ -0.52
PSEN1-215ENST00000556011 ZFHX2Q9C0A1 2572 aaPredicted RBP11.77□□□□□ -0.52
PSEN1-215ENST00000556011 ECM2O94769 699 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-215ENST00000556011 SCNN1DP51172 638 aa11.77□□□□□ -0.53
PSEN1-215ENST00000556011 ERMP1Q7Z2K6 904 aa11.77□□□□□ -0.53
PSEN1-215ENST00000556011 LOC102724428A0A0B4J2F2 783 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 H0YIN7 160 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 EVI5O60447 810 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 SIK1P57059 783 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
PSEN1-215ENST00000556011 ASB2Q96Q27 587 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 VPS8Q8N3P4 1428 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 XIRP2A4UGR9 3374 aa11.76□□□□□ -0.53
PSEN1-215ENST00000556011 GCN1Q92616 2671 aaKnown RBP11.75□□□□□ -0.53
PSEN1-215ENST00000556011 FZD9O00144 591 aa11.75□□□□□ -0.53
PSEN1-215ENST00000556011 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
PSEN1-215ENST00000556011 ZNF622Q969S3 477 aaKnown RBP eCLIP11.75□□□□□ -0.53
PSEN1-215ENST00000556011 PHOX2BQ99453 314 aa11.75□□□□□ -0.53
PSEN1-215ENST00000556011 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
PSEN1-215ENST00000556011 NUP155O75694 1391 aa11.75□□□□□ -0.53
PSEN1-215ENST00000556011 LAMB2P55268 1798 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 BCORQ6W2J9 1755 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 SLX4Q8IY92 1834 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 GPR37L1O60883 481 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 FOSL2P15408 326 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 GBA2Q9HCG7 927 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-215ENST00000556011 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-215ENST00000556011 USP31Q70CQ4 1352 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
PSEN1-215ENST00000556011 ITGB4P16144 1822 aa11.74□□□□□ -0.53
PSEN1-215ENST00000556011 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms