RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TXLNAP40222 546 aa9.1□□□□□ -0.95
SNX6-204ENST00000555541 C20orf204Q6ZNR8 217 aa9.1□□□□□ -0.95
SNX6-204ENST00000555541 ZDHHC1Q8WTX9 485 aa9.1□□□□□ -0.95
SNX6-204ENST00000555541 ALAS2P22557 587 aa9.09□□□□□ -0.95
SNX6-204ENST00000555541 EIF4G2P78344 907 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNX6-204ENST00000555541 GRIK4Q16099 956 aa9.09□□□□□ -0.95
SNX6-204ENST00000555541 SLC30A3Q99726 388 aa9.09□□□□□ -0.95
SNX6-204ENST00000555541 SERTAD1Q9UHV2 236 aa9.09□□□□□ -0.95
SNX6-204ENST00000555541 LRP8Q14114 963 aa9.08□□□□□ -0.96
SNX6-204ENST00000555541 ADGRE1Q14246 886 aa9.08□□□□□ -0.96
SNX6-204ENST00000555541 EML1O00423 815 aa9.07□□□□□ -0.96
SNX6-204ENST00000555541 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
SNX6-204ENST00000555541 ILDR2Q71H61 639 aa9.07□□□□□ -0.96
SNX6-204ENST00000555541 NACC1Q96RE7 527 aa9.07□□□□□ -0.96
SNX6-204ENST00000555541 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
SNX6-204ENST00000555541 PARP3Q9Y6F1 533 aa9.07□□□□□ -0.96
SNX6-204ENST00000555541 HYAL3O43820 417 aaPredicted RBP9.06□□□□□ -0.96
SNX6-204ENST00000555541 SELPP16109 830 aa9.06□□□□□ -0.96
SNX6-204ENST00000555541 MBTPS1Q14703 1052 aa9.06□□□□□ -0.96
SNX6-204ENST00000555541 MAP7D1Q3KQU3 841 aa9.06□□□□□ -0.96
SNX6-204ENST00000555541 GDPD2Q9HCC8 539 aa9.06□□□□□ -0.96
SNX6-204ENST00000555541 CABP1Q9NZU7 370 aa9.06□□□□□ -0.96
SNX6-204ENST00000555541 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
SNX6-204ENST00000555541 TRIM28Q13263 835 aaKnown RBP9.05□□□□□ -0.96
SNX6-204ENST00000555541 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
SNX6-204ENST00000555541 NBPF11Q86T75 865 aa9.04□□□□□ -0.96
SNX6-204ENST00000555541 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
SNX6-204ENST00000555541 SCHIP1Q9P0W5 487 aaPredicted RBP9.04□□□□□ -0.96
SNX6-204ENST00000555541 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
SNX6-204ENST00000555541 EPHA4P54764 986 aa9.03□□□□□ -0.96
SNX6-204ENST00000555541 C9orf172C9J069 976 aa9.02□□□□□ -0.97
SNX6-204ENST00000555541 ADH7P40394 386 aa9.02□□□□□ -0.97
SNX6-204ENST00000555541 TEAD4Q15561 434 aa9.02□□□□□ -0.97
SNX6-204ENST00000555541 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
SNX6-204ENST00000555541 BICDL1Q6ZP65 573 aa9.02□□□□□ -0.97
SNX6-204ENST00000555541 L3MBTL2Q969R5 705 aa9.01□□□□□ -0.97
SNX6-204ENST00000555541 GOLGA2P5Q9HBQ8 144 aa9.01□□□□□ -0.97
SNX6-204ENST00000555541 PRM3Q9NNZ6 103 aa9.01□□□□□ -0.97
SNX6-204ENST00000555541 GPC6Q9Y625 555 aaPredicted RBP9.01□□□□□ -0.97
SNX6-204ENST00000555541 BTBD11A6QL63 1104 aa9□□□□□ -0.97
SNX6-204ENST00000555541 TXNRD3Q86VQ6 643 aa9□□□□□ -0.97
SNX6-204ENST00000555541 LENG1Q96BZ8 264 aaPredicted RBP9□□□□□ -0.97
SNX6-204ENST00000555541 A0A0A0MRY4 1105 aa8.99□□□□□ -0.97
SNX6-204ENST00000555541 ELNP15502 786 aa8.99□□□□□ -0.97
SNX6-204ENST00000555541 NOS2P35228 1153 aa8.99□□□□□ -0.97
SNX6-204ENST00000555541 ABL2P42684 1182 aa8.99□□□□□ -0.97
SNX6-204ENST00000555541 KCNQ4P56696 695 aa8.99□□□□□ -0.97
SNX6-204ENST00000555541 SPEM2Q0P670 501 aa8.99□□□□□ -0.97
SNX6-204ENST00000555541 MCM6Q14566 821 aa8.98□□□□□ -0.97
SNX6-204ENST00000555541 WASHC4Q2M389 1173 aa8.98□□□□□ -0.97
SNX6-204ENST00000555541 PIK3CDO00329 1044 aa8.97□□□□□ -0.97
SNX6-204ENST00000555541 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
SNX6-204ENST00000555541 POTEAQ6S8J7 498 aa8.97□□□□□ -0.97
SNX6-204ENST00000555541 SHISA2Q6UWI4 295 aa8.97□□□□□ -0.97
SNX6-204ENST00000555541 ZNF358Q9NW07 568 aa8.97□□□□□ -0.97
SNX6-204ENST00000555541 RAB44Q7Z6P3 723 aaPredicted RBP8.96□□□□□ -0.98
SNX6-204ENST00000555541 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNX6-204ENST00000555541 COG6Q9Y2V7 657 aa8.95□□□□□ -0.98
SNX6-204ENST00000555541 BACH1O14867 736 aa8.94□□□□□ -0.98
SNX6-204ENST00000555541 SOX11P35716 441 aa8.94□□□□□ -0.98
SNX6-204ENST00000555541 TRAPPC3LQ5T215 181 aa8.94□□□□□ -0.98
SNX6-204ENST00000555541 ALG2Q9H553 416 aa8.94□□□□□ -0.98
SNX6-204ENST00000555541 LILRB5O75023 590 aa8.93□□□□□ -0.98
SNX6-204ENST00000555541 NRG1Q02297 640 aaPredicted RBP8.93□□□□□ -0.98
SNX6-204ENST00000555541 SEMA3FQ13275 785 aa8.93□□□□□ -0.98
SNX6-204ENST00000555541 SLC9A9Q8IVB4 645 aa8.93□□□□□ -0.98
SNX6-204ENST00000555541 TBCELQ5QJ74 424 aa8.92□□□□□ -0.98
SNX6-204ENST00000555541 TP53INP1Q96A56 240 aa8.92□□□□□ -0.98
SNX6-204ENST00000555541 BRD7Q9NPI1 651 aa8.92□□□□□ -0.98
SNX6-204ENST00000555541 HIRAP54198 1017 aaPredicted RBP8.91□□□□□ -0.98
SNX6-204ENST00000555541 TYRO3Q06418 890 aa8.91□□□□□ -0.98
SNX6-204ENST00000555541 FMR1NBQ8N0W7 255 aaPredicted RBP8.91□□□□□ -0.98
SNX6-204ENST00000555541 RNF112Q9ULX5 631 aa8.91□□□□□ -0.98
SNX6-204ENST00000555541 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
SNX6-204ENST00000555541 GTF2IP78347 998 aa8.9□□□□□ -0.98
SNX6-204ENST00000555541 C1orf53Q5VUE5 145 aa8.9□□□□□ -0.98
SNX6-204ENST00000555541 MCTP1Q6DN14 999 aa8.9□□□□□ -0.98
SNX6-204ENST00000555541 TNS4Q8IZW8 715 aa8.9□□□□□ -0.98
SNX6-204ENST00000555541 HSH2DQ96JZ2 352 aa8.9□□□□□ -0.98
SNX6-204ENST00000555541 SERTM1A2A2V5 107 aa8.89□□□□□ -0.99
SNX6-204ENST00000555541 ZNF280CQ8ND82 737 aa8.89□□□□□ -0.99
SNX6-204ENST00000555541 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
SNX6-204ENST00000555541 NAGPAQ9UK23 515 aa8.89□□□□□ -0.99
SNX6-204ENST00000555541 SLC6A14Q9UN76 642 aa8.89□□□□□ -0.99
SNX6-204ENST00000555541 KCNH4Q9UQ05 1017 aa8.89□□□□□ -0.99
SNX6-204ENST00000555541 NEUROD1Q13562 356 aa8.88□□□□□ -0.99
SNX6-204ENST00000555541 RHPN1Q8TCX5 695 aa8.88□□□□□ -0.99
SNX6-204ENST00000555541 RAC1P63000 192 aa8.87□□□□□ -0.99
SNX6-204ENST00000555541 ZNF232Q9UNY5 417 aa8.87□□□□□ -0.99
SNX6-204ENST00000555541 NOD1Q9Y239 953 aa8.87□□□□□ -0.99
SNX6-204ENST00000555541 COL17A1Q9UMD9 1497 aaPredicted RBP8.86□□□□□ -0.99
SNX6-204ENST00000555541 SKIP12755 728 aa8.86□□□□□ -0.99
SNX6-204ENST00000555541 PRKCSHP14314 528 aaPredicted RBP8.86□□□□□ -0.99
SNX6-204ENST00000555541 EML3Q32P44 896 aa8.86□□□□□ -0.99
SNX6-204ENST00000555541 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
SNX6-204ENST00000555541 ADAMTS19Q8TE59 1207 aa8.86□□□□□ -0.99
SNX6-204ENST00000555541 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
SNX6-204ENST00000555541 NEUROD4Q9HD90 331 aa8.86□□□□□ -0.99
SNX6-204ENST00000555541 JPH1Q9HDC5 661 aaPredicted RBP8.86□□□□□ -0.99
SNX6-204ENST00000555541 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms