RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CHIC2Q9UKJ5 165 aa8.63□□□□□ -1.03
SRP54-207ENST00000555535 A6NJY4 79 aa8.62□□□□□ -1.03
SRP54-207ENST00000555535 TXKP42681 527 aa8.62□□□□□ -1.03
SRP54-207ENST00000555535 MAP7D1Q3KQU3 841 aa8.62□□□□□ -1.03
SRP54-207ENST00000555535 TRAPPC3LQ5T215 181 aa8.62□□□□□ -1.03
SRP54-207ENST00000555535 MCTP1Q6DN14 999 aa8.62□□□□□ -1.03
SRP54-207ENST00000555535 LENG1Q96BZ8 264 aaPredicted RBP8.62□□□□□ -1.03
SRP54-207ENST00000555535 CABP1Q9NZU7 370 aa8.62□□□□□ -1.03
SRP54-207ENST00000555535 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
SRP54-207ENST00000555535 PAX4O43316 350 aa8.61□□□□□ -1.03
SRP54-207ENST00000555535 ALBP02768 609 aa8.61□□□□□ -1.03
SRP54-207ENST00000555535 RAC1P63000 192 aa8.61□□□□□ -1.03
SRP54-207ENST00000555535 TSGA10IPQ3SY00 556 aa8.61□□□□□ -1.03
SRP54-207ENST00000555535 NEUROD4Q9HD90 331 aa8.61□□□□□ -1.03
SRP54-207ENST00000555535 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
SRP54-207ENST00000555535 LILRB5O75023 590 aa8.6□□□□□ -1.03
SRP54-207ENST00000555535 ADH7P40394 386 aa8.6□□□□□ -1.03
SRP54-207ENST00000555535 MTMR14Q8NCE2 650 aa8.6□□□□□ -1.03
SRP54-207ENST00000555535 PRM3Q9NNZ6 103 aa8.6□□□□□ -1.03
SRP54-207ENST00000555535 TP53INP1Q96A56 240 aa8.59□□□□□ -1.03
SRP54-207ENST00000555535 RNF112Q9ULX5 631 aa8.59□□□□□ -1.03
SRP54-207ENST00000555535 SELPP16109 830 aa8.58□□□□□ -1.04
SRP54-207ENST00000555535 SERTAD1Q9UHV2 236 aa8.58□□□□□ -1.04
SRP54-207ENST00000555535 BACH1O14867 736 aa8.57□□□□□ -1.04
SRP54-207ENST00000555535 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
SRP54-207ENST00000555535 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
SRP54-207ENST00000555535 YBX3P16989 372 aaKnown RBP eCLIP8.56□□□□□ -1.04
SRP54-207ENST00000555535 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
SRP54-207ENST00000555535 COBLO75128 1261 aa8.55□□□□□ -1.04
SRP54-207ENST00000555535 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
SRP54-207ENST00000555535 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
SRP54-207ENST00000555535 C8orf86Q6ZUL3 223 aa8.55□□□□□ -1.04
SRP54-207ENST00000555535 SLC51AQ86UW1 340 aa8.55□□□□□ -1.04
SRP54-207ENST00000555535 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
SRP54-207ENST00000555535 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
SRP54-207ENST00000555535 USP21Q9UK80 565 aa8.54□□□□□ -1.04
SRP54-207ENST00000555535 TEAD4Q15561 434 aa8.53□□□□□ -1.04
SRP54-207ENST00000555535 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
SRP54-207ENST00000555535 EML1O00423 815 aa8.52□□□□□ -1.05
SRP54-207ENST00000555535 TXLNAP40222 546 aa8.52□□□□□ -1.05
SRP54-207ENST00000555535 SFSWAPQ12872 951 aaKnown RBP8.52□□□□□ -1.05
SRP54-207ENST00000555535 PLPP7Q8NBV4 271 aa8.52□□□□□ -1.05
SRP54-207ENST00000555535 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
SRP54-207ENST00000555535 KCNQ4P56696 695 aa8.51□□□□□ -1.05
SRP54-207ENST00000555535 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
SRP54-207ENST00000555535 SCHIP1Q9P0W5 487 aaPredicted RBP8.51□□□□□ -1.05
SRP54-207ENST00000555535 ANKIB1Q9P2G1 1089 aa8.51□□□□□ -1.05
SRP54-207ENST00000555535 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
SRP54-207ENST00000555535 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
SRP54-207ENST00000555535 NOS2P35228 1153 aa8.5□□□□□ -1.05
SRP54-207ENST00000555535 FMNL2Q96PY5 1086 aa8.5□□□□□ -1.05
SRP54-207ENST00000555535 FMR1NBQ8N0W7 255 aaPredicted RBP8.49□□□□□ -1.05
SRP54-207ENST00000555535 DTWD1Q8N5C7 304 aa8.49□□□□□ -1.05
SRP54-207ENST00000555535 PCMTD2Q9NV79 361 aa8.49□□□□□ -1.05
SRP54-207ENST00000555535 SHISA2Q6UWI4 295 aa8.48□□□□□ -1.05
SRP54-207ENST00000555535 JPH1Q9HDC5 661 aaPredicted RBP8.48□□□□□ -1.05
SRP54-207ENST00000555535 BRD7Q9NPI1 651 aa8.48□□□□□ -1.05
SRP54-207ENST00000555535 SNRKQ9NRH2 765 aa8.48□□□□□ -1.05
SRP54-207ENST00000555535 KCNH4Q9UQ05 1017 aa8.48□□□□□ -1.05
SRP54-207ENST00000555535 RHPN1Q8TCX5 695 aa8.47□□□□□ -1.05
SRP54-207ENST00000555535 ZDHHC1Q8WTX9 485 aa8.47□□□□□ -1.05
SRP54-207ENST00000555535 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
SRP54-207ENST00000555535 ZNF232Q9UNY5 417 aa8.47□□□□□ -1.05
SRP54-207ENST00000555535 C1orf53Q5VUE5 145 aa8.46□□□□□ -1.06
SRP54-207ENST00000555535 UBE2OQ9C0C9 1292 aaKnown RBP8.46□□□□□ -1.06
SRP54-207ENST00000555535 PCDHGA11Q9Y5H2 935 aa8.46□□□□□ -1.06
SRP54-207ENST00000555535 SERTM1A2A2V5 107 aa8.45□□□□□ -1.06
SRP54-207ENST00000555535 LZTS3O60299 673 aaPredicted RBP8.45□□□□□ -1.06
SRP54-207ENST00000555535 SOX11P35716 441 aa8.45□□□□□ -1.06
SRP54-207ENST00000555535 C7orf43Q8WVR3 580 aa8.45□□□□□ -1.06
SRP54-207ENST00000555535 SLC6A14Q9UN76 642 aa8.45□□□□□ -1.06
SRP54-207ENST00000555535 TBC1D2BQ9UPU7 963 aa8.45□□□□□ -1.06
SRP54-207ENST00000555535 IRAK1P51617 712 aa8.44□□□□□ -1.06
SRP54-207ENST00000555535 RAB44Q7Z6P3 723 aaPredicted RBP8.44□□□□□ -1.06
SRP54-207ENST00000555535 WFDC12Q8WWY7 111 aa8.44□□□□□ -1.06
SRP54-207ENST00000555535 CHMP3Q9Y3E7 222 aa8.44□□□□□ -1.06
SRP54-207ENST00000555535 AFF1P51825 1210 aaKnown RBP8.43□□□□□ -1.06
SRP54-207ENST00000555535 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
SRP54-207ENST00000555535 EML3Q32P44 896 aa8.43□□□□□ -1.06
SRP54-207ENST00000555535 IL27Q8NEV9 243 aa8.43□□□□□ -1.06
SRP54-207ENST00000555535 BHMTQ93088 406 aa8.43□□□□□ -1.06
SRP54-207ENST00000555535 NOD1Q9Y239 953 aa8.43□□□□□ -1.06
SRP54-207ENST00000555535 RGS9O75916 674 aaPredicted RBP8.42□□□□□ -1.06
SRP54-207ENST00000555535 SEMA3FQ13275 785 aa8.42□□□□□ -1.06
SRP54-207ENST00000555535 IRF5Q13568 498 aa8.42□□□□□ -1.06
SRP54-207ENST00000555535 PCSK7Q16549 785 aa8.42□□□□□ -1.06
SRP54-207ENST00000555535 PRR23CQ6ZRP0 262 aa8.42□□□□□ -1.06
SRP54-207ENST00000555535 ILDR2Q71H61 639 aa8.42□□□□□ -1.06
SRP54-207ENST00000555535 SLC9A9Q8IVB4 645 aa8.42□□□□□ -1.06
SRP54-207ENST00000555535 HIRAP54198 1017 aaPredicted RBP8.41□□□□□ -1.06
SRP54-207ENST00000555535 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
SRP54-207ENST00000555535 HIF1AQ16665 826 aa8.41□□□□□ -1.06
SRP54-207ENST00000555535 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
SRP54-207ENST00000555535 DMRTC2Q8IXT2 367 aaPredicted RBP8.41□□□□□ -1.06
SRP54-207ENST00000555535 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
SRP54-207ENST00000555535 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
SRP54-207ENST00000555535 IREB2P48200 963 aaKnown RBP8.4□□□□□ -1.06
SRP54-207ENST00000555535 EPHA4P54764 986 aa8.4□□□□□ -1.06
SRP54-207ENST00000555535 PSME1Q06323 249 aa8.4□□□□□ -1.06
SRP54-207ENST00000555535 TYRO3Q06418 890 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms